Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: GEM
https://packages.ecosyste.ms/registries/bioconductor.org/packages/GEM
GEM: fast association study for the interplay of Gene, Environment and Methylation
1 version
Latest release: about 1 year ago
8,842 downloads total
Papers Mentioning GEM 317
10.1186/1939-8433-5-32
Glabrous Rice 1, encoding a homeodomain protein, regulates trichome development in riceCited by: 41
Author(s): Jinjun Li, Yundong Yuan, Zefu Lu, Liusha Yang, Rongcun Gao, Jin-Gen Lu, Jiayang Li, Guosheng Xiong
Software Mentions: 1
Published: about 12 years ago
10.1186/s13049-018-0510-5
Capillary and venous lactate measurements with a handheld device compared to venous blood-gas analysis for emergency patientsCited by: 8
Author(s): David M. Stoll, Erling Englund, Helene Hillborg, Stefan Vedin, Agneta Larsson
Software Mentions: 1
Published: over 6 years ago
10.1038/srep14841
Extensive weight loss reveals distinct gene expression changes in human subcutaneous and visceral adipose tissueCited by: 59
Author(s): Adil Mardinoğlu, John T. Heiker, Daniel Gärtner, Elias Björnson, Michael P. Schön, Gesine Flehmig, Nora Klöting, Knut Krohn, Mathias Faßhauer, Michael Stümvoll, Jens Nielsen, Matthias Blüher
Software Mentions: 1
Published: about 9 years ago
10.1038/srep37984
Benchmarking of Whole Exome Sequencing and Ad Hoc Designed Panels for Genetic Testing of Hereditary CancerCited by: 35
Author(s): Lídia Feliubadaló, Raúl Tonda, Mireia Gausachs, Jean-Rémi Trotta, Elisabeth Castellanos, Adriana López-Dóriga, Àlex Teulé, Eva Tornero, Jesús Del Valle, Bernat Gel, Marta Gut, Marta Pineda, Sara González, Mireia Menéndez, Matilde Navarro, Gabriel Capellá, Eduard Serra, Joan Brunet, Sergi Beltrán, Conxi Lázaro
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-017-11620-3
The utility of Next Generation Sequencing for molecular diagnostics in Rett syndromeCited by: 21
Author(s): Silvia M. Vidal, Núria Brandi, Paola Pacheco, Edgar Gerotina, Laura Campello Blasco, Jean-Rémi Trotta, Sophia Derdak, María del Mar O’Callaghan, Àngels García‐Cazorla, Merçè Pineda, Judith Armstrong
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-017-15913-5
Flow behavior of N2 huff and puff process for enhanced oil recovery in tight oil reservoirsCited by: 21
Author(s): Teng Lu, Zhaomin Li, Jian Li, Dawei Hou, Dingyong Zhang
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-018-27876-2
Geometric metasurface enabling polarization independent beam splittingCited by: 52
Author(s): Gwanho Yoon, Dasol Lee, Ki Tae Nam, Junsuk Rho
Software Mentions: 1
Published: over 6 years ago
10.1038/s41598-019-52420-1
A comparative study between two models of active cluster crystalsCited by: 23
Author(s): Lorenzo Caprini, Emilio Hernández-Garcı́a, Cristóbal López, U. Marconi
Software Mentions: 1
Published: about 5 years ago
10.1038/s41598-020-61174-0
Bridging substrate intake kinetics and bacterial growth phenotypes with flux balance analysis incorporating proteome allocationCited by: 12
Author(s): Hong Zeng, Aidong Yang
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-020-71939-2
Compositional and functional differences of the mucosal microbiota along the intestine of healthy individualsCited by: 74
Author(s): Stefania Vaga, Sunjae Lee, Boyang Ji, Anna Andréasson, Nicholas J. Talley, Lars Agréus, Gholamreza Bidkhori, Petia Kovatcheva‐Datchary, Junseok Park, Doheon Lee, Gordon Proctor, S. Dusko Ehrlich, Jens Nielsen, Lars Engstrand, Saeed Shoaie
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-020-75162-x
The trans-kingdom battle between donor and recipient gut microbiome influences fecal microbiota transplantation outcomeCited by: 24
Author(s): Negin Kazemian, Milad Ramezankhani, Aarushi Sehgal, Faizan Muhammad Khalid, Amir Hossein Zeinali Kalkhoran, Apurva Narayan, Gane Ka‐Shu Wong, Dina Kao, Sepideh Pakpour
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-021-81316-2
Modeling of CO2-LPG WAG with asphaltene deposition to predict coupled enhanced oil recovery and storage performanceCited by: 1
Author(s): Jinhyung Cho, Baehyun Min, Moon Sik Jeong, Young Woo Lee, Kun Sang Lee
Software Mentions: 1
Published: over 3 years ago
10.3390/s21082864
A Hybrid Visual Tracking Algorithm Based on SOM Network and Correlation FilterCited by: 1
Author(s): Yuanping Zhou, Xiu-mei Huang, Ming–Hsuan Yang
Software Mentions: 1
Published: over 3 years ago
10.1186/s40064-016-2109-5
A high performance cost-effective digital complex correlator for an X-band polarimetry surveyCited by: 0
Author(s): Miguel Bergano, Armando Rocha, L. Cupido, Domingos Barbosa, T. Villela, José Vilas Boas, G. Rocha, George F. Smoot
Software Mentions: 1
Published: over 8 years ago
10.1128/mBio.00559-16
Genome-Wide Mapping of Binding Sites Reveals Multiple Biological Functions of the Transcription Factor Cst6p in Saccharomyces cerevisiaeCited by: 22
Author(s): Guodong Liu, David Bergenholm, Jens Nielsen
Software Mentions: 1
Published: over 8 years ago
10.1128/mSystems.00165-16
A Genome-Scale Model of <i>Shewanella piezotolerans</i> Simulates Mechanisms of Metabolic Diversity and Energy ConservationCited by: 11
Author(s): Keith Dufault‐Thompson, Huahua Jian, Rui-Xue Cheng, Jiefu Li, Fengping Wang, Ying Zhang
Software Mentions: 1
Published: over 7 years ago
10.1128/mSystems.00215-17
Reconstruction of a Global Transcriptional Regulatory Network for Control of Lipid Metabolism in Yeast by Using Chromatin Immunoprecipitation with Lambda Exonuclease DigestionCited by: 24
Author(s): David Bergenholm, Guodong Liu, Petter Holland, Jens Nielsen
Software Mentions: 1
Published: about 6 years ago