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Projects: bioconductor: EventPointer

https://packages.ecosyste.ms/registries/bioconductor.org/packages/EventPointer

An effective identification of alternative splicing events using junction arrays and RNA-Seq data
1 version
Latest release: over 2 years ago
9,621 downloads total

Enhanced Analysis
Educational Contributors: jennifer.wokaty@sph.cuny.edu
Repository Activity:
Repository Owner: Juan Pablo Romero (user)
Computational Biologist 2 @10XGenomics
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +20 Educational commit emails
    1 contributors with educational email addresses
  • +10 Science terms in README
    5 scientific terms found in README
Penalties:
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning EventPointer 5

10.1186/s12864-016-2816-x
EventPointer: an effective identification of alternative splicing events using junction arrays
Cited by: 28
Author(s): Juan Pablo Romero, Ander Muniategui, Fernando J. de Miguel, Ander Aramburu, Luis M. Montuenga, Rubén Pı́o, Ángel Rubio
Software Mentions: 7
Published: almost 10 years ago
10.1186/s12864-018-5082-2
Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm
Cited by: 17
Author(s): Juan Pablo Romero, María Ortiz-Estévez, Ander Muniategui, Soraya Carrancio, Fernando J. de Miguel, Fernando Carazo, Luis M. Montuenga, Remco Loos, Rubén Pı́o, Matthew Trotter, Ángel Rubio
Software Mentions: 5
Published: over 7 years ago
10.1038/s41598-019-47343-w
A bioinformatic analysis identifies circadian expression of splicing factors and time-dependent alternative splicing events in the HD-MY-Z cell line
Cited by: 9
Author(s): Nikolaï Genov, Alireza Basti, Marconi Abreu, Rosario Astaburuaga, Angela Relógio
Software Mentions: 5
Published: almost 7 years ago
10.1186/s12864-019-5900-1
Integration of CLIP experiments of RNA-binding proteins: a novel approach to predict context-dependent splicing factors from transcriptomic data
Cited by: 5
Author(s): Fernando Carazo, Marian Gimeno, Juan A Ferrer-Bonsoms, Ángel Rubio
Software Mentions: 3
Published: almost 7 years ago
10.1186/s13578-021-00658-6
Changes to the identity of EndoC-βH1 beta cells may be mediated by stress-induced depletion of HNRNPD
Cited by: 0
Author(s): Nicola Jeffery, David Chambers, Brandon M. Invergo, Ryan M. Ames, Lorna W. Harries
Software Mentions: 2
Published: almost 5 years ago