Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: DegNorm
https://packages.ecosyste.ms/registries/bioconductor.org/packages/DegNorm
DegNorm: degradation normalization for RNA-seq data
1 version
Latest release: about 1 year ago
3,110 downloads total
Papers Mentioning DegNorm 4
10.1186/s12864-021-07381-z
Multiple freeze-thaw cycles lead to a loss of consistency in poly(A)-enriched RNA sequencingCited by: 11
Author(s): Benjamin P. Kellman, Hratch Baghdassarian, Tiziano Pramparo, Isaac Shamie, Vahid H. Gazestani, Arjana Begzati, Shangzhong Li, Srinivasa Nalabolu, Sarah Murray, Linda Lopez, Karen Pierce, Eric Courchesne, Nathan E. Lewis
Software Mentions: 11
Published: almost 4 years ago
10.3390/jof7070562
mRNA Inventory of Extracellular Vesicles from Ustilago maydisCited by: 21
Author(s): Seomun Kwon, Oliver Rupp, Andreas Brachmann, Christopher Blum, Anton Kraege, Alexander Goesmann, Michael Feldbrügge
Software Mentions: 5
Published: over 3 years ago
10.1186/s12967-020-02550-2
Classification models using circulating neutrophil transcripts can detect unruptured intracranial aneurysmCited by: 13
Author(s): Kerry E. Poppenberg, Vincent M. Tutino, Li Lü, Muhammad Waqas, Armond June, Lee Chaves, Kaiyu Jiang, James N. Jarvis, Yijun Sun, Kenneth V. Snyder, Elad I. Levy, Adnan H. Siddiqui, John Kolega, Hui Meng
Software Mentions: 3
Published: about 4 years ago
10.1186/s13059-019-1682-7
DegNorm: normalization of generalized transcript degradation improves accuracy in RNA-seq analysisCited by: 21
Author(s): Bin Xiong, Yiben Yang, Frank R. Fineis, Ji Ping Wang
Software Mentions: 2
Published: over 5 years ago