bioconductor: ComplexHeatmap | Projects

10.1371/journal.pone.0234505

Comparative genomics of high grade neuroendocrine carcinoma of the cervix
Cited by: 21
Author(s): R. Tyler Hillman, Robert J. Cardnell, Junya Fujimoto, Won Chul Lee, Jianjun Zhang, Lauren A. Byers, Preetha Ramalingam, Mario M. Leitao, Elizabeth M. Swisher, P. Andrew Futreal, Michael Frumovitz
Software Mentions: 5
Published: over 4 years ago

10.1111/acel.13441

Youthful and age‐related matreotypes predict drugs promoting longevity
Cited by: 25
Author(s): Cyril Statzer, Elisabeth Jongsma, Sean X Liu, Alexander Dakhovnik, Franziska Wandrey, Pavlo Mozharovskyi, Fred Zülli, Collin Y. Ewald
Software Mentions: 5
Published: over 3 years ago

10.1016/j.bbrep.2021.101126

Cell-to-cell interaction analysis of prognostic ligand-receptor pairs in human pancreatic ductal adenocarcinoma
Cited by: 5
Author(s): Sayaka Suzuki, Akihiro Kuno, Haruka Ozaki
Software Mentions: 5
Published: almost 3 years ago

10.1371/journal.pgen.1008783

Conditional antagonism in co-cultures of Pseudomonas aeruginosa and Candida albicans: An intersection of ethanol and phosphate signaling distilled from dual-seq transcriptomics
Cited by: 23
Author(s): Georgia Doing, Katja Koeppen, Patricia Occipinti, Colleen E. Harty, Deborah A. Hogan
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pbio.2002940

The Ink4a/Arf locus operates as a regulator of the circadian clock modulating RAS activity
Cited by: 46
Author(s): Rukeia El-Athman, Nikolaï Genov, J Mazùch, Kaiyang Zhang, Yong A. Yu, Luise Fuhr, Marconi Abreu, Yin Li, Thomas Wallach, Achim Kramer, Clemens A. Schmitt, Angela Relógio
Software Mentions: 5
Published: almost 7 years ago

10.3390/microorganisms7120598

Environmental Filtering Drives the Assembly of Habitat Generalists and Specialists in the Coastal Sand Microbial Communities of Southern China
Cited by: 24
Author(s): Anyi Hu, Hongjie Wang, Meixian Cao, Abbas Rashid, Mingfeng Li, Chang‐Ping Yu
Software Mentions: 5
Published: about 5 years ago

10.1186/s12974-020-1706-y

Neonatal hypoxia-ischemia in rat elicits a region-specific neurotrophic response in SVZ microglia
Cited by: 14
Author(s): Urs Fisch, Catherine Brégère, Florian Geier, Laurie Chicha, Raphael Guzman
Software Mentions: 5
Published: almost 5 years ago

10.3390/plants9121775

Compositional Analyses Reveal Relationships among Components of Blue Maize Grains
Cited by: 4
Author(s): Amol N. Nankar, M. Paul Scott, Richard C. Pratt
Software Mentions: 5
Published: almost 4 years ago

10.3390/plants9121794

Nanopore RNA Sequencing Revealed Long Non-Coding and LTR Retrotransposon-Related RNAs Expressed at Early Stages of Triticale SEED Development
Cited by: 15
Author(s): Ilya Kirov, Maxim Dudnikov, Pavel Merkulov, Andrey Shingaliev, Murad Omarov, Elizaveta Kolganova, Alexandra Sigaeva, Г. И. Карлов, A. A. Soloviev
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-021-91962-1

OpiumPlex is a novel microsatellite system for profiling opium poppy (Papaver somniferum L.)
Cited by: 4
Author(s): Jakub Vašek, Daniela Čílová, Martina Melounová, Pavel Svoboda, Kamila Zdeňková, Eliška Čermáková, Jaroslava Ovesná
Software Mentions: 5
Published: over 3 years ago

10.3389/fonc.2021.729219

A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
Cited by: 5
Author(s): Diocésio Alves Pinto de Andrade, Luciane Sussuchi da Silva, Ana Carolina Laus, Marcos Alves de Lima, Gustavo Nóriz Berardinelli, Vinícius Duval da Silva, Graziela de Macêdo Matsushita, Murilo Bonatelli, Aline Larissa Virginio da Silva, Adriane Feijó Evangelista, Jesus Paula Carvalho, Rui Manuel Reis, Ricardo dos Reis
Software Mentions: 5
Published: over 3 years ago

10.3389/fcimb.2020.00072

Mucosal Microbiome Profiles Polygenic Irritable Bowel Syndrome in Mestizo Individuals
Cited by: 4
Author(s): René Arredondo‐Hernández, Max Schmulson, Patricia Orduña, Gamaliel López-Leal, Ángel-Mario Zárate, Gerardo J. Alanis-Funes, Luis David Alcaraz, Rubí Santiago-Cruz, Miguel A. Cevallos, Antonio Villa, Samuel Ponce-de-León Rosales, Yolanda López‐Vidal, Consorcio Mexicano para el Estudio del Microbioma Humano
Software Mentions: 5
Published: over 4 years ago

10.1186/s12859-020-03902-x

recoup: flexible and versatile signal visualization from next generation sequencing
Cited by: 5
Author(s): Panagiotis Moulos
Software Mentions: 5
Published: almost 4 years ago

10.1128/mBio.02287-16

Bacterial Topography of the Healthy Human Lower Respiratory Tract
Cited by: 306
Author(s): Robert P. Dickson, John R. Erb-Downward, Christine M. Freeman, Lisa McCloskey, Nicole R. Falkowski, Gary B. Huffnagle, Jeffrey L. Curtis
Software Mentions: 5
Published: over 7 years ago

10.3390/ijms22052738

Identification of Overexpressed Genes in Malignant Pleural Mesothelioma
Cited by: 11
Author(s): Federica Morani, Luisa Bisceglia, Giulia Rosini, Luciano Mutti, Ombretta Melaiu, Stefano Landi, Federica Gemignani
Software Mentions: 5
Published: over 3 years ago

10.1186/s12864-019-5887-7

Refinement of breast cancer molecular classification by miRNA expression profiles
Cited by: 59
Author(s): Rolf Søkilde, Helena Persson, Anna Ehinger, Anna Chiara Pirona, Mårten Fernö, Cecilia Hegardt, Christer Larsson, Niklas Loman, Martin Malmberg, Lisa Rydén, Lao H. Saal, Åke Borg, Johan Vallon-Christerson, Carlos Rovira
Software Mentions: 5
Published: over 5 years ago

10.3389/fmicb.2021.711359

Circulating Levels of the Short-Chain Fatty Acid Acetate Mediate the Effect of the Gut Microbiome on Visceral Fat
Cited by: 67
Author(s): Ana Nogal, Panayiotis Louca, Mengjie Zhang, Philippa M Wells, Claire J. Steves, Tim D. Spector, Mario Falchi, Ana M. Valdes, Cristina Menni
Software Mentions: 5
Published: over 3 years ago

10.3390/cells9061436

Sex Chromosomes and Sex Phenotype Contribute to Biased DNA Methylation in Mouse Liver
Cited by: 14
Author(s): Qinwei Kim-Wee Zhuang, José Héctor Gálvez, Qian Xiao, Najla AlOgayil, Jeffrey Hyacinthe, Teruko Taketo, Guillaume Bourque, Anna K. Naumova
Software Mentions: 5
Published: over 4 years ago

10.3389/fcell.2020.580848

Adherent Intestinal Cells From Atlantic Salmon Show Phagocytic Ability and Express Macrophage-Specific Genes
Cited by: 5
Author(s): Youngjin Park, Qirui Zhang, G.F. Wiegertjes, Jorge M. O. Fernandes, Viswanath Kiron
Software Mentions: 5
Published: about 4 years ago

10.3390/cells9030665

Dysregulated Antibody, Natural Killer Cell and Immune Mediator Profiles in Autoimmune Thyroid Diseases
Cited by: 17
Author(s): Tiphaine Martin, Kristina M. Ilieva, Alessia Visconti, Michelle Beaumont, Steven Kiddle, Richard Dobson, Massimo Mangino, Ee Mun Lim, Marija Pezer, Claire J. Steves, Jordana T. Bell, Scott G. Wilson, Gordan Lauc, Mario Roederer, John P. Walsh, Tim D. Spector, Sophia N. Karagiannis
Software Mentions: 5
Published: over 4 years ago

10.3390/biology9090251

Differential Expression and miRNA–Gene Interactions in Early and Late Mild Cognitive Impairment
Cited by: 20
Author(s): Leonardo Miranda Brito, Ândrea Ribeiro-dos-Santos, Amanda Ferreira Vidal, Gilderlanio Santana de Araújo
Software Mentions: 5
Published: about 4 years ago

10.1186/s13287-021-02508-1

Transcriptome-wide m6A methylome during osteogenic differentiation of human adipose-derived stem cells
Cited by: 4
Author(s): Weihao Sun, Yidan Song, Kai Xia, Liyuan Yu, Xinqi Huang, Zhihe Zhao, Jun Liu
Software Mentions: 5
Published: about 3 years ago

10.3389/fmolb.2021.682084

Comprehensive Molecular Analyses of a Novel Mutational Signature Classification System with Regard to Prognosis, Genomic Alterations, and Immune Landscape in Glioma
Cited by: 26
Author(s): Xinwei Han, Taoyuan Lu, Libo Wang, Long Liu, Lifeng Li, Xinwei Han
Software Mentions: 5
Published: over 3 years ago

10.1126/science.abe9403

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms
Cited by: 461
Author(s): David E. Gordon, Joseph Hiatt, Mehdi Bouhaddou, Veronica V. Rezelj, Svenja Ulferts, Hannes Braberg, Alexander S. Jureka, Kirsten Obernier, Jeffrey Z. Guo, Jyoti Batra, Robyn M. Kaake, Andrew Weckstein, Tristan W. Owens, Meghna Gupta, Sergei Pourmal, Erron W. Titus, Merve Çakır, Margaret Soucheray, Michael McGregor, Zeynep Çakır, Gwendolyn Μ. Jang, Matthew J. O’Meara, Tia A. Tummino, Ziyang Zhang, Helene Foussard, Ajda Rojc, Yuan Zhou, Dmitry Kuchenov, Ruth Hüttenhain, Jiewei Xu, Manon Eckhardt, Danielle L. Swaney, Jacqueline M. Fabius, Manisha R. Ummadi, Beril Tutuncuoglu, Ujjwal Rathore, Maya Modak, Paige Haas, Kelsey M. Haas, Zun Zar Chi Naing, Ernst H. Pulido, Ying Shi, Iñigo Barrio-Hernandez, Danish Memon, Eirini Petsalaki, Alistair S. Dunham, Miguel Marrero, David F. Burke, Cassandra Koh, Thomas Vallet, Jesus A. Silvas, Caleigh M. Azumaya, Christian Billesboelle, Axel F. Brilot, Melody G. Campbell, Amy Diallo, Miles Sasha Dickinson, Devan Diwanji, Nadia Herrera, Nick Hoppe, Huong T. Kratochvil, Yanxin Liu, Gregory E. Merz, Michelle Moritz, Henry C. Nguyen, Carlos Nowotny, Cristina Puchades, Alexandrea N. Rizo, Ursula Schulze‐Gahmen, Amber M. Smith, Ming Sun, I.D. Young, Jianhua Zhao, Daniel Asarnow, J.T. Biel, Alisa Bowen, Julian R. Braxton, Jen Chen, Cynthia M. Chio, Un Seng Chio, Ishan Deshpande, Loan Doan, Bryan Faust, Sebastián Flores, Mingliang Jin, Sun Kyung Kim, Victor Lam, Fei Li, J Li, Yen-Li Li, Yang Li, Xi Liu, Megan Lo, Kyle E. Lopez, Arthur A. Melo, Frank R. Moss, Phuong T. Nguyen, Joana Paulino, Komal Ishwar Pawar, Jessica K. Peters, Thomas H. Pospiech, Maliheh Safari, Smriti Sangwan, Kaitlin Schaefer, Paul Thomas, Aye C. Thwin, Raphael Trenker, Eric Tse, Tsz Kin Martin Tsui, Feng Wang, Natalie Whitis, Zanlin Yu, Kaihua Zhang, Sunny Zhang, Fengbo Zhou, Daniel J. Saltzberg, Anthony J. Hodder, Amber S Shun-Shion, Daniel M. Williams, Kris M. White, Romel Rosales, Thomas Kehrer, Lisa Miorin, Elena Moreno, Arvind H. Patel, Suzannah J. Rihn, Mir M. Khalid, Albert Vallejo-Gracia, Parinaz Fozouni, Camille R. Simoneau, Theodore L. Roth, David Wu, Mohd Anisul Karim, Maya Ghoussaini, Ian Dunham, Francesco Berardi, Sebastian Weigang, Maxime Chazal, Jisoo Park, James Logue, Marisa E. McGrath, Stuart Weston, Robert Haupt, C. James Hastie, Matthew Elliott, Fiona Brown, Kerry Burness, Elaine Reid, Mark Dorward, Clare Johnson, Stuart G. Wilkinson, Anna Geyer, Daniel M. Giesel, Carla Baillie, Samantha L. Raggett, Hannah Leech, Rachel Toth, Nicola Goodman, Kathleen C. Keough, Abigail Lind, Reyna Klesh, Kafi Hemphill, Jared Carlson-Stevermer, Jennifer Oki, Kevin Holden, Travis J. Maures, Katherine S. Pollard, Andrej S̆ali, David A. Agard, Yifan Cheng, James S. Fraser, Adam Frost, Natalia Jura, Tanja Kortemme, Aashish Manglik, Daniel R. Southworth, Robert M. Stroud, Dario R. Alessi, Paul Davies, Matthew B. Frieman, Trey Ideker, Carmen Abate, Nolwenn Jouvenet, Georg Kochs, Brian K Shoichet, Melanie Ott, Massimo Palmarini, Kevan M. Shokat, Adolfo Garcı́a-Sastre, Jeremy A. Rassen, Robert Grosse, Oren S. Rosenberg, Kliment A. Verba, Christopher F. Basler, Marco Vignuzzi, Andrew A. Peden, Pedro Beltrão, Nevan J. Krogan, Tristan W. Owens, Meghna Gupta, Sergei Pourmal, Erron W. Titus, Caleigh M. Azumaya, Christian B. Billesbølle, Axel F. Brilot, Melody G. Campbell, Amy Diallo, Miles Sasha Dickinson, Devan Diwanji, Nadia Herrera, Nick Hoppe, Huong T. Kratochvil, Yanxin Liu, Gregory E. Merz, Michelle Moritz, Henry C. Nguyen, Carlos Nowotny, Cristina Puchades, Alexandrea N. Rizo, Ursula Schulze‐Gahmen, Amber M. Smith, Ming Sun, I.D. Young, Jianhua Zhao, Daniel Asarnow, J.T. Biel, Alisa Bowen, Julian R. Braxton, Jen Chen, Cynthia M. Chio, Un Seng Chio, Ishan Deshpande, Loan Doan, Bryan Faust, Sebastián Flores, Mingliang Jin, Kate Kim, Victor Lam, Fēi Li, Junrui Li, Yen-Li Li, Yang Li, Xi Liu, Megan Lo, Kyle E. Lopez, Arthur A. Melo, Frank R. Moss, Phuong T. Nguyen, Joana Paulino, Komal Ishwar Pawar, Jessica K. Peters, Thomas H. Pospiech, Maliheh Safari, Smriti Sangwan, Kaitlin Schaefer, Paul Thomas, Aye C. Thwin, Raphael Trenker, Eric Tse, Tsz Kin Martin Tsui, Feng Wang, Natalie Whitis, Zanlin Yu, Kaihua Zhang, Zifeng Yang, Fengbo Zhou, Donovan Trinidad, David A. Agard, Yifan Cheng, James S. Fraser, Adam Frost, Natalia Jura, Tanja Kortemme, Aashish Manglik, Daniel R. Southworth, Robert M. Stroud, Oren S. Rosenberg, Kliment A. Verba, Joana Damas, Graham M. Hughes, Kathleen C. Keough, Corrie Painter, Nicole S. Persky, Marco Corbo, Bodgan Kirilenko, Michael Hiller, Klaus‐Peter Koepfli, Irene M. Kaplow, Morgan Wirthlin, Andreas R. Pfenning, Huabin Zhao, Diane P. Genereux, Ross Swofford, Abigail Lind, Katherine S. Pollard, Oliver A. Ryderq, Martin Nweeia, Jennifer R. S. Meadows, Michael X. Dong, Ola Wallerman, Vikki Marinescu, Kerstin Lindblad‐Toh, David A. Ray, Sarahjane Power, Emma C. Teeling, Gaurav Chauhan, Shirley Xue Li, Elinor K. Karlsson, Harris A. Lewin
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-020-77318-1

Improving existing analysis pipeline to identify and analyze cancer driver genes using multi-omics data
Cited by: 9
Author(s): Quang-Huy Nguyen, Duc-Hau Le
Software Mentions: 5
Published: almost 4 years ago

10.1186/s42523-021-00084-6

Probiotics mediated gut microbiota diversity shifts are associated with reduction in histopathology and shedding of Lawsonia intracellularis
Cited by: 5
Author(s): Adrian Muwonge, Anbu K. Karuppannan, Tanja Opriessnig
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-020-77289-3

Evaluation of the upper airway microbiome and immune response with nasal epithelial lining fluid absorption and nasal washes
Cited by: 4
Author(s): Meghan H. Shilts, Christian Rosas‐Salazar, Christian Edward Cyril Lynch, Andrey Tovchigrechko, Helen H. Boone, Patty Russell, Alexandra Connolly, Kaitlin Costello, Megan D McCollum, Annie Mai, Derek Wiggins, Seesandra V. Rajagopala, Shibu Yooseph, R. Stokes Peebles, Tina V. Hartert, Suman Das
Software Mentions: 5
Published: almost 4 years ago

10.1186/s12864-020-06811-8

VviERF6Ls: an expanded clade in Vitis responds transcriptionally to abiotic and biotic stresses and berry development
Cited by: 3
Author(s): Haley S. Toups, Noé Cochetel, D. J. Gray, Grant R. Cramer
Software Mentions: 5
Published: over 4 years ago

10.3390/vaccines8030438

Distinct miRNA Profile of Cellular and Extracellular Vesicles Released from Chicken Tracheal Cells Following Avian Influenza Virus Infection
Cited by: 4
Author(s): Kelsey O’Dowd, Mehdi Emam, Mohamed Reda El Khili, Amin Emad, Eveline M. Ibeagha‐Awemu, Carl A. Gagnon, Neda Barjesteh
Software Mentions: 5
Published: over 4 years ago

10.3390/foods9091247

Application of a High-Throughput Amplicon Sequencing Method to Chart the Bacterial Communities that Are Associated with European Fermented Meats from Different Origins
Cited by: 14
Author(s): Emiel Van Reckem, Christina Charmpi, David Van der Veken, Wim Borremans, Luc De Vuyst, Stefan Weckx, Frédéric Leroy
Software Mentions: 5
Published: about 4 years ago

10.3389/fnins.2020.607215

Unraveling Targetable Systemic and Cell-Type-Specific Molecular Phenotypes of Alzheimer’s and Parkinson’s Brains With Digital Cytometry
Cited by: 5
Author(s): Marie Catherine Bordone, Nuno L. Barbosa‐Morais
Software Mentions: 5
Published: almost 4 years ago

10.1002/cam4.4206

Key sunitinib‐related biomarkers for renal cell carcinoma
Cited by: 9
Author(s): Yun Peng, Shiqiang Dong, Yuxuan Song, Dingkun Hou, Lili Wang, Bowen Li, Haitao Wang
Software Mentions: 5
Published: over 3 years ago

10.1186/s13073-020-00783-w

The murine Microenvironment Cell Population counter method to estimate abundance of tissue-infiltrating immune and stromal cell populations in murine samples using gene expression
Cited by: 50
Author(s): Florent Petitprez, Sacha Lévy, Chengming Sun, Maxime Meylan, Christophe Linhard, Étienne Becht, Nabila Elarouci, David Tavel, Lubka T. Roumenina, Mira Ayadi, Catheriné Sautès-Fridman, Aurélien de Reyniès
Software Mentions: 5
Published: about 4 years ago

10.3390/ijms21113770

Transcriptional Activity and Stability of CD39+CD103+CD8+ T Cells in Human High-Grade Endometrial Cancer
Cited by: 13
Author(s): Hagma H. Workel, Nienke van Rooij, Annechien Plat, Diana C.J. Spierings, Rudolf S.N. Fehrmann, Hans W. Nijman, Marco de Bruyn
Software Mentions: 5
Published: over 4 years ago

10.3389/fimmu.2018.02055

Molecular and Cellular Response to Experimental Anisakis pegreffii (Nematoda, Anisakidae) Third-Stage Larval Infection in Rats
Cited by: 19
Author(s): Ivana Bušelić, Željka Trumbić, Jerko Hrabar, Anamarija Vrbatović, Ivana Bočina, Ivona Mladineo
Software Mentions: 5
Published: about 6 years ago

10.1038/s41385-020-0305-7

γδ T cells compose a developmentally regulated intrauterine population and protect against vaginal candidiasis
Cited by: 32
Author(s): Leticia Monin, Dmitry S. Ushakov, Henriette Arnesen, Nourdine Bah, Anett Jandke, Miguel Muñoz-Ruiz, Joana Carvalho, Susan Joseph, Bruna Almeida, M. J. Green, Emma Nye, Shoji Hatano, Yasunobu Yoshikai, Michael Curtis, Harald Carlsen, Ulrich Steinhoff, Preben Boysen, Adrian Hayday
Software Mentions: 5
Published: about 4 years ago

10.1186/s12916-020-01806-4

ADAM22/LGI1 complex as a new actionable target for breast cancer brain metastasis
Cited by: 7
Author(s): Sara Charmsaz, Ben Doherty, Sinéad Cocchiglia, Damir Varešlija, Attilio Marino, Nicola Cosgrove, Ricardo Marques, Nolan Priedigkeit, Siobhan Purcell, Fiona T. Bane, Jarlath Bolger, Christopher Byrne, Philip J. O’Halloran, Francesca Brett, Katherine M. Sheehan, Kieran Brennan, Ann M. Hopkins, Stephen Keelan, Petra Jagušt, Stephen F. Madden, Chiara Martinelli, Matteo Battaglini, Steffi Oesterreich, Adrian V. Lee, Gianni Ciofani, Arnold D. Hill, Leonie S. Young
Software Mentions: 5
Published: about 4 years ago

10.1186/s13073-021-00879-x

Whole-genome sequencing of phenotypically distinct inflammatory breast cancers reveals similar genomic alterations to non-inflammatory breast cancers
Cited by: 7
Author(s): Xiaotong Li, Sushant Kumar, Arif Harmanci, Shantao Li, Robert Kitchen, Yan Zhang, Vikram B. Wali, Sangeetha M. Reddy, Wendy A. Woodward, James M. Reuben, Joel Rozowsky, Christos Hatzis, Naoto T. Ueno, Savitri Krishnamurthy, Lajos Pusztai, Mark Gerstein
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0231999

The genomic landscape of metastatic breast cancer: Insights from 11,000 tumors
Cited by: 28
Author(s): Jacob Rinaldi, Ethan S. Sokol, Ryan J. Hartmaier, Sally E. Trabucco, Garrett M. Frampton, Michael E. Goldberg, Lee A. Albacker, Anneleen Daemen, Gerard Manning
Software Mentions: 5
Published: over 4 years ago

10.1101/2020.12.05.20244442

Seroconversion stages COVID19 into distinct pathophysiological states
Cited by: 3
Author(s): Matthew D. Galbraith, Kohl T Kinning, Kelly D. Sullivan, Ryan M. Baxter, Paula Araya, Kimberly R. Jordan, Seth Russell, Keith P Smith, Ross E Granrath, Jessica Shaw, Monika Dzieciątkowska, Tusharkanti Ghosh, Andrew A. Monte, Angelo D’Alessandro, Kirk C. Hansen, Tellen D. Bennett, Elena W.Y. Hsieh, Joaquín M. Espinosa
Software Mentions: 5
Published: almost 4 years ago

10.3389/fimmu.2021.639965

Inflammatory Determinants of Differential Tuberculosis Risk in Pre-Adolescent Children and Young Adults
Cited by: 7
Author(s): Richard Baguma, Stanley Kimbung Mbandi, Miguel Rodo, Mzwandile Erasmus, Jonathan Day, Lebohang Makhethe, Marwou de Kock, Michele van Rooyen, Lynnett Stone, Nicole Bilek, Marcia Steyn, Hadn Africa, Fatoumatta Darboe, Novel N. Chegou, Gerard Tromp, Gerhard Walzl, Mark Hatherill, Adam Penn-Nicholson, Thomas J. Scriba
Software Mentions: 5
Published: over 3 years ago

10.3390/ijms21124302

Identification and Characterization of Circular Intronic RNAs Derived from Insulin Gene
Cited by: 11
Author(s): Debojyoti Das, Aniruddha Das, Mousumi Sahu, Smruti Sambhav Mishra, Shaheerah Khan, Pruthvi Raj Bejugam, Pranita K Rout, Arundhoti Das, Shehnaz Bano, Gyan P. Mishra, Sunil K. Raghav, Anshuman Dixit, Amaresh C. Panda
Software Mentions: 5
Published: over 4 years ago

10.7150/jca.47698

Mass Spectrometry Imaging Differentiates Chromophobe Renal Cell Carcinoma and Renal Oncocytoma with High Accuracy
Cited by: 7
Author(s): Mark Kriegsmann, Rita Casadonte, Nadine Maurer, Christine Stoehr, Franziska Erlmeier, Holger Moch, Kerstin Junker, Christiane Zgorzelski, Wilko Weichert, Kristina Schwamborn, Sören‐Oliver Deininger, Matthias M. Gaida, Gunhild Mechtersheimer, Albrecht Stenzinger, Peter Schirmacher, Arndt Hartmann, Joerg Kriegsmann, Katharina Kriegsmann
Software Mentions: 5
Published: almost 5 years ago

10.3390/cancers11121951

Novel and Rare Fusion Transcripts Involving Transcription Factors and Tumor Suppressor Genes in Acute Myeloid Leukemia
Cited by: 17
Author(s): Antonella Padella, Giorgia Simonetti, Giulia Paciello, George Giotopoulos, Carmen Baldazzi, Simona Righi, Martina Ghetti, Anna Stengel, Viviana Guadagnuolo, Rossella De Tommaso, Cristina Papayannidis, Valentina Robustelli, Eugenia Franchini, Andrea Ghelli Luserna di Rorà, Anna Ferrari, Maria Chiara Fontana, Samantha Bruno, Emanuela Ottaviani, Simona Soverini, Clelia Tiziana Storlazzi, Claudia Haferlach, Elena Sabattini, Nicoletta Testoni, Ilaria Iacobucci, Brian J.P. Huntly, Elisa Ficarra, Giovanni Martinelli
Software Mentions: 5
Published: almost 5 years ago

10.1111/jcmm.15109

Development and validation of a 10‐gene prognostic signature for acute myeloid leukaemia
Cited by: 11
Author(s): Zaixing Yang, Jun Shang, Ning Li, Liang Zhang, Tingting Tang, Guoyan Tian, Xiaohui Chen
Software Mentions: 5
Published: over 4 years ago

10.3390/cancers12040792

Analysis of HPV-Positive and HPV-Negative Head and Neck Squamous Cell Carcinomas and Paired Normal Mucosae Reveals Cyclin D1 Deregulation and Compensatory Effect of Cyclin D2
Cited by: 7
Author(s): Jiří Novotný, Veronika Bandúrová, Hynek Strnad, Martin Chovanec, Miluše Hradilová, Jana Šáchová, Martin Šteffl, Josipa Grušanović, Roman Kodet, Václav Pačes, Lukáš Lacina, Karel Smetana, Jan Plzák, Michal Kolář, Tomáš Vomastek
Software Mentions: 5
Published: over 4 years ago

10.3390/cancers13030365

Genome-Wide Circular RNA Expression Patterns Reflect Resistance to Immunomodulatory Drugs in Multiple Myeloma Cells
Cited by: 18
Author(s): Theresa Jakobsen, Mette Dahl, Konstantinos Dimopoulos, Kirsten Grønbæk, Jørgen Kjems, Lasse Sommer Kristensen
Software Mentions: 5
Published: almost 4 years ago

10.1002/cam4.3481

Integrated genomic analysis identifies a genetic mutation model predicting response to immune checkpoint inhibitors in melanoma
Cited by: 22
Author(s): Junjie Jiang, Yongfeng Ding, Mengjie Wu, Yanyan Chen, Xiadong Lyu, Jun Lü, Haiyong Wang, Lisong Teng
Software Mentions: 5
Published: about 4 years ago

10.1186/s12967-021-02858-7

Deconvolution of sarcoma methylomes reveals varying degrees of immune cell infiltrates with association to genomic aberrations
Cited by: 5
Author(s): Malte Simon, Sadaf S. Mughal, Peter Horak, Sebastian Uhrig, Jonas Buchloh, Bogac Aybey, Albrecht Stenzinger, Hanno Glimm, Stefan Fröhling, Benedikt Brors, Charles D. Imbusch
Software Mentions: 4
Published: over 3 years ago

10.1002/advs.202000486

Machine Learning‐Assisted Evaluation of Circulating DNA Quantitative Analysis for Cancer Screening
Cited by: 17
Author(s): Rita Tanos, Guillaume Tosato, Amaëlle Otandault, Zahra Al Amir Dache, Laurence Lasorsa, Geoffroy Tousch, Safia El Messaoudi, Romain Meddeb, Mona Diab Assaf, Marc Ychou, Stanislas du Manoir, Denis Pezet, Johan Gagnière, Pierre Colombo, William Jacot, Eric Assénat, Marie Dupuy, Antoine Adenis, Thibault Mazard, Caroline Mollévi, José María Sayagués, Jacques Colinge, Alain R. Thierry
Software Mentions: 4
Published: over 4 years ago

10.1016/j.ajpath.2017.11.007

Fibroblasts Promote Inflammation and Pain via IL-1α Induction of the Monocyte Chemoattractant Chemokine (C-C Motif) Ligand 2
Cited by: 22
Author(s): Hannah L Paish, Nicolas Stewart Kalson, Graham R. Smith, Alicia del Carpio Pons, Thomas E. Baldock, Nicholas I. Smith, Katarzyna Swist-Szulik, David J. Weir, Michelle Bardgett, David J. Deehan, Derek A. Mann, Lee A. Borthwick
Software Mentions: 4
Published: over 6 years ago

10.3390/antiox10030498

Characterization of NADPH Oxidase Expression and Activity in Acute Myeloid Leukemia Cell Lines: A Correlation with the Differentiation Status
Cited by: 10
Author(s): Hassan Dakik, Maya El Dor, Joan Leclerc, Farah Kouzi, Ali Nehme, Margaux Deynoux, Christelle Debeissat, Georges Khamis, Elfi Ducrocq, Aida Ibrik, Marie‐José Stasia, Houssam Raad, Hamid Reza Rezvani, Fabrice Gouilleux, Kazem Zibara, Olivier Hérault, Frédéric Mazurier
Software Mentions: 4
Published: over 3 years ago

10.1186/s12870-018-1611-z

Phytohormone treatment induces generation of cryptic peptides with antimicrobial activity in the Moss Physcomitrella patens
Cited by: 25
Author(s): Igor Fesenko, Regina Azarkina, Ilya Kirov, Andrei Kniazev, Anna Filippova, Ekaterina N. Grafskaia, В. Н. Лазарев, Victor G. Zgoda, Ivan Butenko, Olga Bukato, Irina Lyapina, Dmitry Nazarenko, S. N. Elansky, Anna Mamaeva, В. Т. Иванов, Vadim M. Govorun
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12870-020-2268-y

Modulation of volatile compound metabolome and transcriptome in grape berries exposed to sunlight under dry-hot climate
Cited by: 24
Author(s): Lei He, Xiaoqing Xu, Yu Wang, Wei-Kai Chen, Ruonan Sun, Guodong Cheng, Bin Liu, Changyong Wu, Chang‐Qing Duan, Jun Wang, Qiu-Hong Pan
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12870-019-2012-7

Drought tolerance of the grapevine, Vitis champinii cv. Ramsey, is associated with higher photosynthesis and greater transcriptomic responsiveness of abscisic acid biosynthesis and signaling
Cited by: 18
Author(s): Noé Cochetel, Ryan Ghan, Haley S. Toups, Asfaw Degu, Richard L. Tillett, Karen Schlauch, Grant R. Cramer
Software Mentions: 4
Published: almost 5 years ago

10.1155/2019/2601271

Integrative Analysis of ceRNA Network Reveals Functional lncRNAs in Intrahepatic Cholangiocarcinoma
Cited by: 10
Author(s): Dongkai Zhou, Bo Gao, Qifan Yang, Yahui Kong, Weilin Wang
Software Mentions: 4
Published: almost 5 years ago

10.1186/s13058-019-1170-8

Claudin-low-like mouse mammary tumors show distinct transcriptomic patterns uncoupled from genomic drivers
Cited by: 17
Author(s): Christian Fougner, Helga Bergholtz, Raoul V. Kuiper, Jens Henrik Norum, Thérese Sørlie
Software Mentions: 4
Published: over 5 years ago

10.1007/s00262-020-02778-3

IL-10, IL-13, Eotaxin and IL-10/IL-6 ratio distinguish breast implant-associated anaplastic large-cell lymphoma from all types of benign late seromas
Cited by: 12
Author(s): Arianna Di Napoli, Daniele Greco, Giorgia Scafetta, Francesca Ascenzi, Alessandro Gulino, Luigi Aurisicchio, Fabio Santanelli di Pompeo, Adriana Bonifacino, Enrico Giarnieri, John Morgan, Rita Mancini, Marshall E. Kadin
Software Mentions: 4
Published: about 4 years ago

10.1002/cam4.2035

Dysregulation, functional implications, and prognostic ability of the circadian clock across cancers
Cited by: 19
Author(s): Yi Li, Kai Yu, Jian Zheng, Huan Lin, Qi Zhao, Xiaolong Zhang, Wei Feng, Li-Yu Wang, Jianjun Xu, Dawei Xie, Zhixiang Zuo, Zexian Liu, Qi Zheng
Software Mentions: 4
Published: almost 6 years ago

10.26508/lsa.202101135

UVB mutagenesis differs in Nras- and Braf-mutant mouse models of melanoma
Cited by: 7
Author(s): Robert L. Bowman, Rebecca C. Hennessey, Tirzah J. Weiss, David Tallman, Emma R. Crawford, Brandon Murphy, Amy Webb, Souhui Zhang, Krista M. La Perle, Craig J. Burd, Ross L. Levine, A. Hunter Shain
Software Mentions: 4
Published: over 3 years ago

10.1186/s12934-021-01658-4

Transcriptomics reveal different metabolic strategies for acid resistance and gamma-aminobutyric acid (GABA) production in select Levilactobacillus brevis strains
Cited by: 7
Author(s): Sagarika Banerjee, M. H. Poore, Svetlana Gerdes, Derek Nedveck, Lene Lauridsen, Heidi Thomsen Kristensen, Henrik Max Jensen, Phillip M. Byrd, Arthur C. Ouwehand, Elaine Patterson, Wesley Morovic
Software Mentions: 4
Published: about 3 years ago

10.3390/microorganisms9071411

Enterocin Cross-Resistance Mediated by ABC Transport Systems
Cited by: 4
Author(s): Claudia Teso-Pérez, Manuel Martínez‐Bueno, Juan Manuel Peralta‐Sánchez, Eva Valdivia, Mercedes Maqueda, María Esther Fárez-Vidal, Antonio Manuel Martín-Platero
Software Mentions: 4
Published: over 3 years ago

10.3390/microorganisms9040751

Characterization and Performance of Lactate-Feeding Consortia for Reductive Dechlorination of Trichloroethene
Cited by: 10
Author(s): Jiangwei Li, Anyi Hu, Shaoping Bai, Xiaoyang Yang, Qian Sun, Xu Liao, Chang‐Ping Yu
Software Mentions: 4
Published: over 3 years ago

10.14202/vetworld.2018.1203-1209

An innovative approach to predict immune-associated genes mutually targeted by cow and human milk microRNAs expression profiles
Cited by: 6
Author(s): Kaj Chokeshaiusaha, Thanida Sananmuang, Denis Puthier, Catherine Nguyen
Software Mentions: 4
Published: about 6 years ago

10.3390/v12101065

Genome Sequence and Characterization of Five Bacteriophages Infecting Streptomyces coelicolor and Streptomyces venezuelae: Alderaan, Coruscant, Dagobah, Endor1 and Endor2
Cited by: 14
Author(s): Aël Hardy, Vikas Sharma, Larissa Kever, Julia Frunzke
Software Mentions: 4
Published: about 4 years ago

10.14814/phy2.13133

Hypothalamic transcriptomic alterations in male and female California mice (Peromyscus californicus) developmentally exposed to bisphenol A or ethinyl estradiol
Cited by: 25
Author(s): Sarah A. Johnson, William G. Spollen, Lindsey K. Manshack, Nathan J. Bivens, Scott A. Givan, Cheryl S. Rosenfeld
Software Mentions: 4
Published: almost 8 years ago

10.1111/tpj.14205

Identification and characterization of a core set of ROS wave‐associated transcripts involved in the systemic acquired acclimation response of Arabidopsis to excess light
Cited by: 84
Author(s): Sara I. Zandalinas, Soham Sengupta, David J. Burks, Rajeev K. Azad, Ron Mittler
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pbio.3000591

Yap suppresses T-cell function and infiltration in the tumor microenvironment
Cited by: 50
Author(s): Eleni Stampouloglou, Nan Cheng, Anthony Federico, Emily M. Slaby, Stefano Monti, Gregory L. Szeto, Xaralabos Varelas
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pone.0251396

Fullerenol changes metabolite responses differently depending on the iron status of cucumber plants
Cited by: 5
Author(s): Nikolai P. Bityutskii, Kirill L. Yakkonen, Roman Puzanskiy, Kseniia A. Lukina, А. Л. Шаварда, Konstantin N. Semenov
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0239827

Impact of a candidate vaccine on the dynamics of salmon lice (Lepeophtheirus salmonis) infestation and immune response in Atlantic salmon (Salmo salar L.)
Cited by: 16
Author(s): Jaya Kumari Swain, Yamila Carpio, Lill-Heidi Johansen, Janet Velázquez, Liz Hernández, Yeny Leal, Ajey Kumar, Mario Pablo Estrada
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0239677

Genomic characterization of a diazotrophic microbiota associated with maize aerial root mucilage
Cited by: 9
Author(s): Shawn M. Higdon, Tania Pozzo, Nguyet Kong, Bihua C. Huang, Mai Lee Yang, Richard Jeannotte, C. Titus Brown, A. B. Bennett, Bart C. Weimer
Software Mentions: 4
Published: about 4 years ago

10.3390/cancers12123639

Single-Cell RNA Sequencing of a Postmenopausal Normal Breast Tissue Identifies Multiple Cell Types That Contribute to Breast Cancer
Cited by: 13
Author(s): Sen Peng, Lora L. Hebert, Jennifer Eschbacher, Suwon Kim
Software Mentions: 4
Published: almost 4 years ago

10.3390/cancers11040561

Expression Profiling of Calcium Channels and Calcium-Activated Potassium Channels in Colorectal Cancer
Cited by: 47
Author(s): İbrahim Şehitoğlu, Hassan Dakik, Christophe Vandier, Romain Chautard, Gilles Paintaud, Frédéric Mazurier, Thierry Lecomte, Maxime Guéguinou, William Raoul
Software Mentions: 4
Published: over 5 years ago

10.1038/s41418-020-00733-4

Control of replication stress and mitosis in colorectal cancer stem cells through the interplay of PARP1, MRE11 and RAD51
Cited by: 18
Author(s): Gwenola Manic, Martina Musella, Francesca Corradi, Antonella Sistigu, Sara Vitale, Sara Soliman Abdel Rehim, Luca Mattiello, Eva Malacaria, Claudia Galassi, Michele Signore, Matteo Pallocca, Stefano Scalera, Frauke Goeman, Francesca De Nicola, Andrea Guarracino, Rosa Pennisi, Fabrizio Antonangeli, Francesca Sperati, Marta Baiocchi, Mauro Biffoni, Maurizio Fanciulli, Marcello Maugeri‐Saccà, Annapaola Franchitto, Pietro Pichierri, Ruggero De Maria, Ilio Vitale
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41419-020-02884-1

NLRP7 plays a functional role in regulating BMP4 signaling during differentiation of patient-derived trophoblasts
Cited by: 18
Author(s): Aybuke Alici-Garipcan, Burcu Özçimen, Ilke Süder, Volkan Ülker, Tamer T. Önder, Nesrin Özören
Software Mentions: 4
Published: over 4 years ago

10.3390/cells10051008

Transcriptome Analysis of Hypoxic Lymphatic Endothelial Cells Indicates Their Potential to Contribute to Extracellular Matrix Rearrangement
Cited by: 18
Author(s): Jürgen Becker, Sonja Schwoch, Christina Zelent, Maren Sitte, Gabriela Salinas, Jörg Wilting
Software Mentions: 4
Published: over 3 years ago

10.1186/s13148-021-01176-5

DNA methylation profiling identifies two distinct subgroups in breast cancers with low hormone receptor expression, mainly associated with HER2 amplification status
Cited by: 1
Author(s): Philipp Jurmeister, Karsten E. Weber, Sonia L. Villegas, Thomas Karn, Michael Untch, Anne Thieme, Volkmar Müller, Eliane Tabea Taube, Peter A. Fasching, Wolfgang Schmitt, Frederik Marmé, Elmar Stickeler, Bruno Valentin Sinn, Paul Jank, Christian Schem, Frederick Klauschen, Marion van Mackelenbergh, Carsten Denkert, Sibylle Loibl, David Capper
Software Mentions: 4
Published: about 3 years ago

10.1016/j.csbj.2020.12.011

Active phase prebiotic feeding alters gut microbiota, induces weight-independent alleviation of hepatic steatosis and serum cholesterol in high-fat diet-fed mice
Cited by: 11
Author(s): Shreya Ghosh, Yifan Yang, Linghua Wang, Chenhong Zhang, Liping Zhao
Software Mentions: 4
Published: almost 4 years ago

10.1016/j.crimmu.2021.07.002

Tissue macrophages and interferon-gamma signalling control blood-stage Plasmodium chabaudi infections derived from mosquito-transmitted parasites
Cited by: 2
Author(s): Katrien Deroost, Christopher Alder, Caroline Hosking, Sarah McLaughlin, Jing-wen Lin, Matthew D. Lewis, Yolanda Saavedra-Torres, John W.G. Addy, Prisca Lévy, Maria Giorgalli, Jean Langhorne
Software Mentions: 4
Published: almost 4 years ago

10.15252/embj.2019103894

<scp>SCHENGEN</scp> receptor module drives localized <scp>ROS</scp> production and lignification in plant roots
Cited by: 67
Author(s): Satoshi Fujita, Damien De Bellis, Kai H. Edel, Philipp Köster, Tonni Grube Andersen, Emanuel Schmid‐Siegert, Valérie Dénervaud Tendon, Alexandre Pfister, Peter Marhavý, Robertas Ursache, Verónica G. Doblas, Marie Barberon, Jean Daraspe, Audrey Creff, Gwyneth Ingram, Jörg Kudla, Niko Geldner
Software Mentions: 4
Published: over 4 years ago

10.15252/embj.2019103932

<scp>RNF</scp> 43 truncations trap <scp>CK</scp> 1 to drive niche‐independent self‐renewal in cancer
Cited by: 24
Author(s): Maureen Spit, Nicola Fenderico, Ingrid Jordens, Tomasz Radaszkiewicz, Rik G.H. Lindeboom, Jeroen M. Bugter, Alba Cristobal, Lars Ootes, Max van Osch, Eline Janssen, Kim E. Boonekamp, Kateřina Hanáková, David Potěšil, Zbyněk Zdráhal, Sylvia F. Boj, Jan Paul Medema, Vı́tězslav Bryja, Bon‐Kyoung Koo, Michiel Vermeulen, Madelon M. Maurice
Software Mentions: 4
Published: over 4 years ago

10.3389/fnagi.2017.00383

Hippocampal Transcriptomic Profiles: Subfield Vulnerability to Age and Cognitive Impairment
Cited by: 38
Author(s): Lara Ianov, Matt De Both, Monica K. Chawla, Asha Rani, Andrew Kennedy, Ignazio S. Piras, Jeremy J. Day, Ashley L. Siniard, Ashok Kumar, J. David Sweatt, Carol A. Barnes, Matthew J. Huentelman, Thomas C. Foster
Software Mentions: 4
Published: almost 7 years ago

10.3389/fcell.2021.628957

Comparative RNA-Seq Transcriptome Analysis on Pulmonary Inflammation in a Mouse Model of Asthma–COPD Overlap Syndrome
Cited by: 6
Author(s): Pei Ma, Shuyi Li, Hui Yang, Jing Yuan, Ziqian Zhang, Xuyu Li, Nan Fang, Mingbao Lin, Qi Hou
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2021.702877

Mapping Autoantibodies in Children With Acute Rheumatic Fever
Cited by: 7
Author(s): Reuben McGregor, Mei Lin Tay, Lauren H. Carlton, Paulina Hanson‐Manful, Jeremy M Raynes, Wasan Forsyth, Diane Brewster, Martin Middleditch, Julie Bennett, William J. Martin, Nigel Wilson, Polly Atatoa Carr, Michael G Baker, Nicole J. Moreland
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2020.594540

The Monocytes That Repopulate in Mice After Cyclophosphamide Treatment Acquire a Neutrophil Precursor Gene Signature and Immunosuppressive Activity
Cited by: 5
Author(s): Zhi Chun Ding, Nada S. Aboelella, Locke J. Bryan, Huidong Shi, Gang Zhou
Software Mentions: 4
Published: almost 4 years ago

10.3389/fimmu.2021.709466

Human Placental Trophoblasts Infected by Listeria monocytogenes Undergo a Pro-Inflammatory Switch Associated With Poor Pregnancy Outcomes
Cited by: 15
Author(s): Lauren J. Johnson, Siavash Azari, Amy Webb, Xiaoli Zhang, Mikhail A. Gavrilin, James L. Marshall, Kara M. Rood, Stéphanie Seveau
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2021.599805

Innate Lymphoid Cells Activation and Transcriptomic Changes in Response to Human Dengue Infection
Cited by: 6
Author(s): Tiraput Poonpanichakul, Wilawan Chan-in, Anunya Opasawatchai, Fabien Loison, Oranart Matangkasombut, Varodom Charoensawan, Ponpan Matangkasombut, Denfree Thailand
Software Mentions: 4
Published: over 3 years ago

10.3389/fimmu.2021.689051

Individuality in the Immune Repertoire and Induced Response of the Sponge Halichondria panicea
Cited by: 11
Author(s): Lara Schmittmann, Sören Franzenburg, Lucía Pita
Software Mentions: 4
Published: over 3 years ago

10.3389/fmed.2021.656827

Molecular Epidemiology of Salmonellosis in Florida, USA, 2017–2018
Cited by: 6
Author(s): Nitya Singh, Xiaolong Li, Elizabeth Beshearse, Jason Blanton, Jamie DeMent, Arie H. Havelaar
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2020.588264

Pretreatment of Rapeseed Meal Increases Its Recalcitrant Fiber Fermentation and Alters the Microbial Community in an in vitro Model of Swine Large Intestine
Cited by: 5
Author(s): Long Cheng, Koen Venema
Software Mentions: 4
Published: about 4 years ago

10.3389/fmicb.2020.616875

Curing of Cocoa Beans: Fine-Scale Monitoring of the Starter Cultures Applied and Metabolomics of the Fermentation and Drying Steps
Cited by: 19
Author(s): Cristian Díaz-Muñoz, Dario Van de Voorde, Andrea Comasio, Marko Verce, Carlos Eduardo Hernandez, Stefan Weckx, Luc De Vuyst
Software Mentions: 4
Published: almost 4 years ago

10.3389/fphar.2021.692454

Unsupervised Hierarchical Clustering Identifies Immune Gene Subtypes in Gastric Cancer
Cited by: 9
Author(s): Jing Cao, Jiao Gong, Xinhua Li, Zhaoxia Hu, Yingjun Xu, Huading Shi, Danyang Li, Guangjian Liu, Yusheng Jie, Bo Hu, Yutian Chong
Software Mentions: 4
Published: over 3 years ago

10.3389/fpls.2020.01118

Cysteine and Methionine Biosynthetic Enzymes Have Distinct Effects on Seed Nutritional Quality and on Molecular Phenotypes Associated With Accumulation of a Methionine-Rich Seed Storage Protein in Rice
Cited by: 6
Author(s): Sarah J. Whitcomb, Apidet Rakpenthai, Franziska Brückner, Axel Fischer, S. Parmar, Alexander Erban, Joachim Kopka, Malcolm J. Hawkesford, Rainer Hoefgen
Software Mentions: 4
Published: over 4 years ago

10.3389/fpls.2020.588846

Genome-Wide Identification of Populus Malectin/Malectin-Like Domain-Containing Proteins and Expression Analyses Reveal Novel Candidates for Signaling and Regulation of Wood Development
Cited by: 8
Author(s): Vikash Kumar, Evgeniy N. Donev, Félix Barbut, Sunita Kushwah, Chanaka Mannapperuma, János Urbancsok, Ewa J. Mellerowicz
Software Mentions: 4
Published: almost 4 years ago

10.1534/g3.119.400729

Regeneration Rosetta: An Interactive Web Application To Explore Regeneration-Associated Gene Expression and Chromatin Accessibility
Cited by: 2
Author(s): Andrea Rau, Sumona P. Dhara, Ava J. Udvadia, Paul L. Auer
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41436-019-0519-9

Comorbidity landscape of the Danish patient population affected by chromosome abnormalities
Cited by: 10
Author(s): Isabella Friis Jørgensen, Francesco Russo, Anders B. Jensen, David Westergaard, Mette Lademann, Jessica Xin Hu, Søren Brunak, Kirstine Belling
Software Mentions: 4
Published: about 5 years ago

10.1093/gbe/evz158

Geography Shapes the Population Genomics of Salmonella enterica Dublin
Cited by: 19
Author(s): Gavin Fenske, Anil J. Thachil, Patrick L. McDonough, Amy L. Glaser, Joy Scaria
Software Mentions: 4
Published: over 5 years ago

10.1155/2020/1949415

Serum Irisin Levels, Endothelial Dysfunction, and Inflammation in Pediatric Patients with Type 2 Diabetes Mellitus and Metabolic Syndrome
Cited by: 21
Author(s): Anna Sofia Huerta Delgado, Daniel N Roffe-Vazquez, Adrian M. Gonzalez‐Gil, José R Villarreal-Calderón, Oscar Tamez-Rivera, Nora A. Rodríguez-Gutiérrez, Elena C. Castillo, Christian Silva-Platas, Gerardo García‐Rivas, Leticia Elizondo‐Montemayor
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.ppat.1009132

Memory like NK cells display stem cell like properties after Zika virus infection
Cited by: 8
Author(s): Weshely Kujur, Oscar Murillo, Sitaramaraju Adduri, Ramakrishna Vankayalapati, Nagarjun V. Konduru, Sachin Mulik
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.ppat.1009734

Divergent metabolism between Trypanosoma congolense and Trypanosoma brucei results in differential sensitivity to metabolic inhibition
Cited by: 10
Author(s): Pieter C. Steketee, Emily A. Dickie, James Iremonger, Kathryn Crouch, Edith Paxton, Siddharth Jayaraman, Omar A. Alfituri, Georgina Awuah‐Mensah, Ryan Ritchie, Achim Schnaufer, T.G. Rowan, Harry P. de Koning, Catarina Gadelha, Bill Wickstead, Michael P. Barrett, Liam J. Morrison
Software Mentions: 4
Published: over 3 years ago

Projects: bioconductor: ComplexHeatmap

Papers Mentioning ComplexHeatmap 565