Projects: bioconductor: ChIPXpress
https://packages.ecosyste.ms/registries/bioconductor.org/packages/ChIPXpress
ChIPXpress: enhanced transcription factor target gene identification from ChIP-seq and ChIP-chip data using publicly available gene expression profiles
1 version
Latest release: almost 2 years ago
14,910 downloads total
Science Score: 85/100
Starting Score: 100 points
Bonuses:
Penalties:
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-15
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Very Likely Science (85)
Papers Mentioning ChIPXpress 3
10.1186/1471-2105-14-188
ChIPXpress: using publicly available gene expression data to improve ChIP-seq and ChIP-chip target gene rankingCited by: 14
Author(s): George Y. Wu, Hongkai Ji
Software Mentions: 4
Published: about 12 years ago
10.1038/srep11432
TRRUST: a reference database of human transcriptional regulatory interactionsCited by: 289
Author(s): Heonjong Han, Hongseok Shim, Donghyun Shin, Jung Eun Shim, Yun-Hee Ko, Junha Shin, Hanhae Kim, Ara Cho, Eiru Kim, Tak H. Lee, Hyojin Kim, Kyung-Soo Kim, Sunmo Yang, Dasom Bae, Ayoung Yun, Sunphil Kim, Chan Yeong Kim, Hyeon Jin Cho, Byung Ha Kang, Seunghwan Shin, Insuk Lee
Software Mentions: 2
Published: about 10 years ago
10.1038/s41598-018-23417-z
Transcription factor PAX6 as a novel prognostic factor and putative tumour suppressor in non-small cell lung cancerCited by: 10
Author(s): Yury Kiselev, Sigve Andersen, Charles Johannessen, Bjørn Fjukstad, Karina Standahl Olsen, Helge Stenvold, Samer Al-Saad, Tom Dønnem, Elin Richardsen, Roy M. Bremnes, Lill-Tove Busund
Software Mentions: 1
Published: over 7 years ago