Projects: bioconductor: AMARETTO
https://packages.ecosyste.ms/registries/bioconductor.org/packages/AMARETTO
Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
1 version
Latest release: over 2 years ago
5,209 downloads total
Science Score: 70/100
Starting Score: 100 points
Bonuses:
Penalties:
-
-30
Corporate indicators
1 corporate/proprietary indicators found
Very Likely Science (70)
Papers Mentioning AMARETTO 5
10.3389/fonc.2020.00423
Computational Oncology in the Multi-Omics Era: State of the ArtCited by: 55
Author(s): Guillermo de Anda-Jáuregui, Enrique Hernández‐Lemus
Software Mentions: 46
Published: almost 6 years ago
10.3389/fgene.2016.00002
Strategies for Integrated Analysis of Genetic, Epigenetic, and Gene Expression Variation in Cancer: Addressing the ChallengesCited by: 16
Author(s): Louise B. Thingholm, Lars van Brakel Andersen, Enes Makalic, Melissa C. Southey, Mads Thomassen, Lise Lotte Hansen
Software Mentions: 6
Published: about 10 years ago
10.3389/fgene.2020.00844
Circulating Cell-Free Nucleic Acids as Epigenetic Biomarkers in Precision MedicineCited by: 29
Author(s): Beenish Rahat, Taqveema Ali, Divika Sapehia, Aatish Mahajan, Jyotdeep Kaur
Software Mentions: 2
Published: over 5 years ago
10.1200/CCI.19.00125
Imaging-AMARETTO: An Imaging Genomics Software Tool to Interrogate Multiomics Networks for Relevance to Radiography and Histopathology Imaging Biomarkers of Clinical OutcomesCited by: 6
Author(s): Olivier Gevaert, Mohsen Nabian, Shaimaa Bakr, Celine Everaert, Jayendra Shinde, Artur Manukyan, Ted Liefeld, Thorin Tabor, Jishu Xu, Joachim Lupberger, Brian J. Haas, Thomas F. Baumert, Mikel Hernáez, Michael Reich, Francisco J. Quintana, Erik J. Uhlmann, Anna M. Krichevsky, Jill P. Mesirov, Vincent J. Carey, Nathalie Pochet
Software Mentions: 2
Published: over 5 years ago
10.1186/1471-2164-15-S10-S8
CaMoDi: a new method for cancer module discoveryCited by: 18
Author(s): Alexandros Manolakos, Idoia Ochoa, Kartik Venkat, Andrea Goldsmith, Olivier Gevaert
Software Mentions: 1
Published: over 11 years ago