Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: AMARETTO

https://packages.ecosyste.ms/registries/bioconductor.org/packages/AMARETTO

Regulatory Network Inference and Driver Gene Evaluation using Integrative Multi-Omics Analysis and Penalized Regression
1 version
Latest release: 7 months ago
5,209 downloads total

Papers Mentioning AMARETTO 5

10.3389/fonc.2020.00423

Computational Oncology in the Multi-Omics Era: State of the Art
Cited by: 55
Author(s): Guillermo de Anda-Jáuregui, Enrique Hernández‐Lemus
Software Mentions: 46
Published: about 4 years ago

Strategies for Integrated Analysis of Genetic, Epigenetic, and Gene Expression Variation in Cancer: Addressing the Challenges
Cited by: 16
Author(s): Louise B. Thingholm, Lars van Brakel Andersen, Enes Makalic, Melissa C. Southey, Mads Thomassen, Lise Lotte Hansen
Software Mentions: 6
Published: over 8 years ago

10.3389/fgene.2020.00844

Circulating Cell-Free Nucleic Acids as Epigenetic Biomarkers in Precision Medicine
Cited by: 29
Author(s): Beenish Rahat, Taqveema Ali, Divika Sapehia, Aatish Mahajan, Jyotdeep Kaur
Software Mentions: 2
Published: almost 4 years ago

10.1200/CCI.19.00125

Imaging-AMARETTO: An Imaging Genomics Software Tool to Interrogate Multiomics Networks for Relevance to Radiography and Histopathology Imaging Biomarkers of Clinical Outcomes
Cited by: 6
Author(s): Olivier Gevaert, Mohsen Nabian, Shaimaa Bakr, Celine Everaert, Jayendra Shinde, Artur Manukyan, Ted Liefeld, Thorin Tabor, Jishu Xu, Joachim Lupberger, Brian J. Haas, Thomas F. Baumert, Mikel Hernáez, Michael Reich, Francisco J. Quintana, Erik J. Uhlmann, Anna M. Krichevsky, Jill P. Mesirov, Vincent J. Carey, Nathalie Pochet
Software Mentions: 2
Published: over 3 years ago

10.1186/1471-2164-15-S10-S8

CaMoDi: a new method for cancer module discovery
Cited by: 18
Author(s): Alexandros Manolakos, Idoia Ochoa, Kartik Venkat, Andrea Goldsmith, Olivier Gevaert
Software Mentions: 1
Published: over 9 years ago