10.3390/su10103636

A Comparative Analysis of Global Datasets and Initiatives for Urban Health and Sustainability
Cited by: 3
Author(s): Jonathon Taylor, Andy Haines, James Milner, Martin Davies, Paul Wilkinson
Software Mentions: 1
Published: almost 8 years ago

10.3390/toxins12090599

First Detection of Tetrodotoxin in Bivalves and Gastropods from the French Mainland Coasts
Cited by: 29
Author(s): Vincent Hort, Nathalie Arnich, Thierry Guérin, Gwenaëlle Lavison-Bompard, Marina Nicolas
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pgen.1004096

New MicroRNAs in Drosophila—Birth, Death and Cycles of Adaptive Evolution
Cited by: 52
Author(s): Yang Lyu, Yang Shen, Heng Li, Yuxin Chen, Li Guo, Yixin Zhao, Eric Hungate, Suhua Shi, Chung‐I Wu, Tian Tang
Software Mentions: 1
Published: over 12 years ago

10.1111/tgis.12329

A taxonomy of quality assessment methods for volunteered and crowdsourced geographic information
Cited by: 37
Author(s): Lívia Castro Degrossi, João Porto de Albuquerque, Roberto dos Santos Rocha, Alexander Zipf
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1007170

Cdc73 suppresses genome instability by mediating telomere homeostasis
Cited by: 14
Author(s): Rahul V. Nene, Christopher D. Putnam, Bin-Zhong Li, Katarina G. Nguyen, Anjana Srivatsan, Christopher S. Campbell, Arshad Desai, Richard D. Kolodner
Software Mentions: 1
Published: over 8 years ago

10.1016/j.trd.2020.102420

Level of traffic stress-based classification: A clustering approach for Bogotá, Colombia
Cited by: 10
Author(s): Jorge A. Huertas, Alejandro Peña Palacio, Marcelo Botero, Germán A. Carvajal, Thomas van Laake, Diana Higuera-Mendieta, Sergio Cabrales, Luis A. Guzman, Olga L. Sarmiento, Andrés L. Medaglia
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pgen.1004204

RBPJ, the Major Transcriptional Effector of Notch Signaling, Remains Associated with Chromatin throughout Mitosis, Suggesting a Role in Mitotic Bookmarking
Cited by: 70
Author(s): Robert J. Lake, Pei-Fang Tsai, In-Chan Choi, Kyoung Jae Won, Hua-Ying Fan
Software Mentions: 1
Published: over 12 years ago

10.1007/s11250-013-0534-9

Seropositivity and risk factors for Brucella in dairy cows in urban and peri-urban small-scale farming in Tajikistan
Cited by: 25
Author(s): Elisabeth Lindahl, Nosirjon Sattorov, Sofia Boqvist, Izzatullo Sattori, Ulf Magnusson
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pgen.1005064

Bacterial Infection Drives the Expression Dynamics of microRNAs and Their isomiRs
Cited by: 57
Author(s): Katherine J. Siddle, Ludovic Tailleux, Matthieu Deschamps, Yong-Hwee Eddie Loh, Cécile Deluen, Brigitte Gicquel, Christophe Antoniewski, Luis B. Barreiro, Laurent Farinelli, Lluı́s Quintana-Murci
Software Mentions: 1
Published: over 11 years ago

10.1016/j.isprsjprs.2021.04.006

Aerial scene understanding in the wild: Multi-scene recognition via prototype-based memory networks
Cited by: 10
Author(s): Yuansheng Hua, Lichao Mou, Jianzhe Lin, Konrad Heidler, Xiao Xiang Zhu
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pgen.1004355

A Lack of Parasitic Reduction in the Obligate Parasitic Green Alga Helicosporidium
Cited by: 49
Author(s): Jean‐François Pombert, Nicolas A. Blouin, Christopher E. Lane, Drion G. Boucias, Patrick J. Keeling
Software Mentions: 1
Published: over 12 years ago

10.1016/j.isprsjprs.2019.11.004

Building segmentation through a gated graph convolutional neural network with deep structured feature embedding
Cited by: 88
Author(s): Yilei Shi, Qingyu Li, Xiao Xiang Zhu
Software Mentions: 1
Published: over 6 years ago

10.1016/j.isprsjprs.2020.06.014

X-ModalNet: A semi-supervised deep cross-modal network for classification of remote sensing data
Cited by: 139
Author(s): Danfeng Hong, Naoto Yokoya, Gui-Song Xia, Jocelyn Chanussot, Xiao Xiang Zhu
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pgen.1003512

Drosophila Functional Elements Are Embedded in Structurally Constrained Sequences
Cited by: 11
Author(s): Ephraim Kenigsberg, Amos Tanay
Software Mentions: 1
Published: over 13 years ago

10.1186/s12966-019-0906-2

Neighbourhood drivability: environmental and individual characteristics associated with car use across Europe
Cited by: 17
Author(s): Nicolette R. den Braver, Julia G. Kok, Joreintje D. Mackenbach, Harry Rutter, Jean‐Michel Oppert, Sofie Compernolle, Jos W. R. Twisk, Johannes Brug, Joline W.J. Beulens, Jeroen Lakerveld
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pgen.1004515

A System for Genome-Wide Histone Variant Dynamics In ES Cells Reveals Dynamic MacroH2A2 Replacement at Promoters
Cited by: 26
Author(s): Özlem Yıldırım, Jui-Hung Hung, Ryan J. Cedeno, Zhiping Weng, Christopher J. Lengner, Oliver J. Rando
Software Mentions: 1
Published: about 12 years ago

10.1080/17538947.2016.1275829

Modelling changing population distributions: an example of the Kenyan Coast, 1979–2009
Cited by: 17
Author(s): Catherine Linard, Caroline Kabaria, Marius Gilbert, Andrew J. Tatem, Andrea A.E. Gaughan, Forrest R. Stevens, Alessandro Sorichetta, Abdisalan Noor, Robert W. Snow
Software Mentions: 1
Published: over 9 years ago

10.1186/s12939-020-1123-y

Too poor or too far? Partitioning the variability of hospital-based childbirth by poverty and travel time in Kenya, Malawi, Nigeria and Tanzania
Cited by: 20
Author(s): Kerry L. M. Wong, Oliver J. Brady, Oona M. R. Campbell, Aduragbemi Banke-Thomas, Lenka Beňová
Software Mentions: 1
Published: over 6 years ago

10.1186/s12942-021-00278-w

Comparing different data sources by examining the associations between surrounding greenspace and children's weight status
Cited by: 7
Author(s): Yusheng Zhou, Thomas von Lengerke, Maren Dreier
Software Mentions: 1
Published: over 5 years ago

10.1186/s12942-017-0087-7

Development of a spatial sampling protocol using GIS to measure health disparities in Bobo-Dioulasso, Burkina Faso, a medium-sized African city
Cited by: 10
Author(s): Daouda Kassié, Anna Roudot, Nadine Dessay, Jean-Luc Piermay, Gérard Salem, Florence Fournet
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pntd.0002489

Whole Genome Sequencing of Field Isolates Reveals a Common Duplication of the Duffy Binding Protein Gene in Malagasy Plasmodium vivax Strains
Cited by: 103
Author(s): Didier Ménard, E. Ricky Chan, Christophe Benedet, Arsène Ratsimbasoa, Saorin Kim, Pheaktra Chim, Catherine Do, Benoît Witkowski, Rémy Durand, Marc Thellier, Carlo Severini, Eric Legrand, Lise Musset, Bakri Y. M. Nour, Odile Mercereau–Puijalon, David Serre, Peter A. Zimmerman
Software Mentions: 1
Published: almost 13 years ago

10.1186/s12942-017-0090-z

Characterisation of the natural environment: quantitative indicators across Europe
Cited by: 39
Author(s): Graham Smith, Marta Cirach, Wim Swart, Audrius Dėdelė, Christopher Gidlow, Elise van Kempen, Hanneke Kruize, Regina Gražulevičienė, Mark Nieuwenhuijsen
Software Mentions: 1
Published: over 9 years ago

10.1186/s12942-020-00208-2

GIS-modelled built-environment exposures reflecting daily mobility for applications in child health research
Cited by: 7
Author(s): Amy Mizen, Richard Fry, Sarah Rodgers
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0206110

Genomic heterogeneity differentiates clinical and environmental subgroups of Legionella pneumophila sequence type 1
Cited by: 8
Author(s): Jeffrey W. Mercante, Jason Caravas, Maliha K. Ishaq, Natalia A. Kozak-Muiznieks, Brian Raphael, Jonas M. Winchell
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0129190

p53 Represses the Oncogenic Sno-MiR-28 Derived from a SnoRNA
Cited by: 52
Author(s): Yu Feng, Cameron P. Bracken, Katherine A. Pillman, David Lawrence, Gregory J. Goodall, David F. Callen, Paul M. Neilsen
Software Mentions: 1
Published: over 11 years ago

10.1186/s12942-016-0037-9

Using a geographic information system to enhance patient access to point-of-care diagnostics in a limited-resource setting
Cited by: 30
Author(s): William J. Ferguson, Karen Kemp, Gerald J. Kost
Software Mentions: 1
Published: over 10 years ago

10.1186/s12942-021-00275-z

Context-aware heatstroke relief station placement and route optimization for large outdoor events
Cited by: 2
Author(s): Yan Wu, Tianqi Xia, Adam Jatowt, Haoran Zhang, Xiao Feng, Ryosuke Shibasaki, Kyoung-Sook Kim
Software Mentions: 1
Published: over 5 years ago

10.1186/s12942-017-0081-0

From urban planning and emergency training to Pokémon Go: applications of virtual reality GIS (VRGIS) and augmented reality GIS (ARGIS) in personal, public and environmental health
Cited by: 62
Author(s): Maged N. Kamel Boulos, Zhihan Lü, Paul Guerrero, Charlene Jennett, Anthony Steed
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0255914

Nested PCR followed by NGS: Validation and application for HPV genotyping of Tunisian cervical samples
Cited by: 6
Author(s): M. Ardhaoui, Emna Ennaifer, Anna Christina de Matos Salim, Flávio Marcom Gomez, T. Laasili, Mohamed Samir Boubaker, Ikram Guizani
Software Mentions: 1
Published: about 5 years ago

10.1186/s12942-019-0182-z

The linkage between the perception of neighbourhood and physical activity in Guangzhou, China: using street view imagery with deep learning techniques
Cited by: 34
Author(s): Ruoyu Wang, Ye Liu, Yi Lü, Yuan Yuan, Jinbao Zhang, Penghua Liu, Yao Yao
Software Mentions: 1
Published: about 7 years ago

10.1186/s12942-020-0197-5

Is the closest health facility the one used in pregnancy care-seeking? A cross-sectional comparative analysis of self-reported and modelled geographical access to maternal care in Mozambique, India and Pakistan
Cited by: 21
Author(s): Liberty Makacha, Prestige Tatenda Makanga, Yolisa Prudence Dube, Jeffrey Bone, Khátia Munguambe, Geetanjali Katageri, Sumedha Sharma, Marianne Vidler, Esperança Sevene, Umesh Y Ramadurg, Umesh Charantimath, Amit Revankar, Peter von Dadelszen
Software Mentions: 1
Published: over 6 years ago

10.1186/s12942-021-00263-3

Quantifying spatial accessibility of general practitioners by applying a modified huff three-step floating catchment area (MH3SFCA) method
Cited by: 15
Author(s): Julia Subal, Piret Paal, Jukka M. Krisp
Software Mentions: 1
Published: over 5 years ago

10.1186/s12942-017-0079-7

A direct observation method for auditing large urban centers using stratified sampling, mobile GIS technology and virtual environments
Cited by: 14
Author(s): Sean J. V. Lafontaine, M. Sawada, Elizabeth Kristjansson
Software Mentions: 1
Published: over 9 years ago

10.1186/s12942-021-00290-0

Development of a Web GIS for small-scale detection and analysis of COVID-19 (SARS-CoV-2) cases based on volunteered geographic information for the city of Cologne, Germany, in July/August 2020
Cited by: 4
Author(s): Fabian Schmidt, Arne Dröge-Rothaar, Andreas Rienow
Software Mentions: 1
Published: about 5 years ago

10.1186/s12942-018-0121-4

Measurement of the potential geographic accessibility from call to definitive care for patient with acute stroke
Cited by: 22
Author(s): Julie Freyssenge, Florent Renard, Anne-Marie Schott, Laurent Derex, Norbert Nighoghossian, Karim Tazarourte, Carlos El Khoury
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0028318

Comparative Analysis of Human Protein-Coding and Noncoding RNAs between Brain and 10 Mixed Cell Lines by RNA-Seq
Cited by: 27
Author(s): Geng Chen, Kangping Yin, Leming Shi, Yunzhang Fang, Ya Qi, Peng Li, Jian Luo, Bing He, Mingyao Liu, Tieliu Shi
Software Mentions: 1
Published: almost 15 years ago

10.1371/journal.pone.0184917

Comparative analysis of miRNAs of two rapeseed genotypes in response to acetohydroxyacid synthase-inhibiting herbicides by high-throughput sequencing
Cited by: 2
Author(s): Meijiao Hu, Pu Huang, Jianqin Gao, Wei Long, Feng Chen, Wei Zhang, Xiaoyin Zhou, Qi Peng, Song Chen, Jiefu Zhang
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pone.0072781

Genome-Wide SNP and STR Discovery in the Japanese Crested Ibis and Genetic Diversity among Founders of the Japanese Population
Cited by: 7
Author(s): Yoshinori Taniguchi, Hideaki Matsuda, Takahisa Yamada, Toshie Sugiyama, Kosuke Homma, Yoshinori Kaneko, Satoshi Yamagishi, Hiroaki Iwaisaki
Software Mentions: 1
Published: about 13 years ago

10.1186/s12942-020-00232-2

Modelling and mapping the intra-urban spatial distribution of Plasmodium falciparum parasite rate using very-high-resolution satellite derived indicators
Cited by: 11
Author(s): Stefanos Georganos, Oscar Brousse, Sébastien Dujardin, Catherine Linard, Daniel Casey, Marco Milliones, Benoît Parmentier, Nicole Van Lipzig, Matthias Demuzere, Taïs Grippa, Sabine Vanhuysse, Nicholus Mboga, Verónica Andreo, Robert W. Snow, Moritz Lennert
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pone.0166770

Intraluminal Flagellin Differentially Contributes to Gut Dysbiosis and Systemic Inflammation following Burn Injury
Cited by: 16
Author(s): Logan Grimes, Allie Doyle, Aaron L. Miller, Richard B. Pyles, Gábor Oláh, Csaba Szabó, Sarah Hoskins, Tonyia Eaves-Pyles
Software Mentions: 1
Published: almost 10 years ago

10.3390/v13050786

Age, Disease Severity and Ethnicity Influence Humoral Responses in a Multi-Ethnic COVID-19 Cohort
Cited by: 18
Author(s): Muneerah Smith, Houari Abdesselem, Michelle O. Mullins, Ti-Myen Tan, Andrew J. M. Nel, Maryam Al‐Nesf, Ilham Bensmail, Nour K. Majbour, Nishant N. Vaikath, Aleš Belič, Khalid Ouararhni, Vidya Mohamed‐Ali, Mohammed Al-Maadheed, Darien T. Schell, Seanantha S. Baros-Steyl, Nur Diana Anuar, Nur Hafiza Ismail, Priscilla E. Morris, Raja N. R. Mamat, Najwa Hanim Rosli, Arif Anwar, Kavithambigai Ellan, Rozainanee M. Zain, Wendy A. Burgers, Elizabeth Mayne, Omar M. A. El‐Agnaf, Jonathan M. Blackburn
Software Mentions: 1
Published: over 5 years ago

10.1186/s13071-020-3992-8

Exploring the relationship between susceptibility to canine leishmaniosis and anti-Phlebotomus perniciosus saliva antibodies in Ibizan hounds and dogs of other breeds in Mallorca, Spain
Cited by: 10
Author(s): Alexis C. Burnham, Laura Ordeix, M. Magdalena Alcover, Pamela Martínez-Orellana, Sara Montserrat‐Sangrà, Laura Willen, Tatiana Spitzová, Petr Volf, Laia Solano‐Gallego
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0169242

Generation of a Stable Transgenic Swine Model Expressing a Porcine Histone 2B-eGFP Fusion Protein for Cell Tracking and Chromosome Dynamics Studies
Cited by: 12
Author(s): Renan Sper, Sehwon Koh, Xia Zhang, Sean Simpson, Bruce Collins, Jeff Sommer, Robert M. Petters, Ignacio Caballero, Jeffrey L. Platt, Jorge A. Piedrahita
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0104395

Correlation of Prostatic Urethral Angle with the Severity of Urinary Symptom and Peak Flow Rate in Men with Small Prostate Volume
Cited by: 16
Author(s): Dong Hyuk Kang, Joo Yong Lee, Yoon Soo Hah, Doo Yong Chung, Dae Hun Lee, Kang Su Cho
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0193945

Stone heterogeneity index on single-energy noncontrast computed tomography can be a positive predictor of urinary stone composition
Cited by: 6
Author(s): Jong Soo Lee, Kang Su Cho, Seung Hwan Lee, Young Eun Yoon, Dong Hyuk Kang, Wooyoung Jeong, Hae Do Jung, Jong Kyou Kwon, Joo Yong Lee
Software Mentions: 1
Published: over 8 years ago

10.3389/fpsyg.2021.662991

Development of the Family Togetherness Scale: A Mixed-Methods Validation Study in Kenya
Cited by: 5
Author(s): Eve S. Puffer, Ali Giusto, Amber D. Rieder, Elsa A. Friis-Healy, David Ayuku, Eric Green
Software Mentions: 1
Published: over 5 years ago

10.1016/j.cell.2012.06.018

piRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. elegans
Cited by: 663
Author(s): Alyson Ashe, Alexandra Sapetschnig, Eva-Maria Weick, Jacinth Mitchell, Marloes P. Bagijn, Amy Cording, Anna-Lisa Doebley, Leonard D. Goldstein, Nicolas J Lehrbach, Jérémie Le Pen, Greta Pintacuda, Aisa Sakaguchi, Peter Sarkies, Shawn Ahmed, Eric A. Miska
Software Mentions: 1
Published: over 14 years ago

10.3390/jcm8020243

Predictors of Uric Acid Stones: Mean Stone Density, Stone Heterogeneity Index, and Variation Coefficient of Stone Density by Single-Energy Non-Contrast Computed Tomography and Urinary pH
Cited by: 7
Author(s): Jong Chan Kim, Kang Su Cho, Do Kyung Kim, Doo Yong Chung, Hae Do Jung, Joo Yong Lee
Software Mentions: 1
Published: over 7 years ago

10.1038/s41419-021-03636-5

A family harboring an MLKL loss of function variant implicates impaired necroptosis in diabetes
Cited by: 21
Author(s): Joanne M Hildebrand, Bernice Lo, Sara Tomei, Valentina Di Mattei, Samuel N. Young, Cheree Fitzgibbon, James M. Murphy, Abeer A. Fadda
Software Mentions: 1
Published: over 5 years ago

10.1136/thoraxjnl-2014-205766

Diagnostic accuracy of pulmonary host inflammatory mediators in the exclusion of ventilator-acquired pneumonia
Cited by: 57
Author(s): Thomas P Hellyer, Andrew Conway Morris, Daniel F. McAuley, Timothy Walsh, Niall Anderson, Suveer Singh, Paul Dark, Alistair Roy, Simon Baudouin, Stephen E. Wright, Gavin D. Perkins, Kallirroi Kefala, Melinda Jeffels, Ronan McMullan, Cecilia M O'Kane, Craig Spencer, Shondipon Laha, Nicole Robin, Savita Gossain, Kate Gould, Marie-Hélène Ruchaud-Sparagano, Jonathan Scott, Emma Browne, James G. MacFarlane, Sarah Wiscombe, John Widdrington, Ian Dimmick, Ian F. Laurenson, Frans Nauwelaers, A. John Simpson
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pbio.1000084

Sir2 Paralogues Cooperate to Regulate Virulence Genes and Antigenic Variation in Plasmodium falciparum
Cited by: 215
Author(s): Christopher J. Tonkin, Céline Carret, Manoj T. Duraisingh, Till S. Voss, Stuart A. Ralph, Mirja Hommel, Michael Duffy, Liliana Mancio da Silva, Artur Scherf, Alasdair Ivens, Terence P. Speed, James G. Beeson, Alan F. Cowman
Software Mentions: 1
Published: over 17 years ago

10.1016/j.celrep.2014.11.033

Rfx6 Maintains the Functional Identity of Adult Pancreatic β Cells
Cited by: 106
Author(s): Julie Piccand, Perrine Strasser, David J. Hodson, A. Meunier, Tao Ye, Céline Keime, Marie‐Christine Birling, Guy A. Rutter, Gérard Gradwohl
Software Mentions: 1
Published: almost 12 years ago

10.1186/s13058-018-1082-z

Overdiagnosis in the population-based organized breast cancer screening program estimated by a non-homogeneous multi-state model: a cohort study using individual data with long-term follow-up
Cited by: 17
Author(s): Wendy Wu, Sven Törnberg, K. Miriam Elfström, Xijia Liu, Lennarth Nyström, Håkan Jonsson
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0205152

Downscaling of national crop area statistics using drivers of cropland productivity measured at fine resolutions
Cited by: 2
Author(s): Jingyu Song, Michael S. Delgado, Paul V. Preckel, Nelson B. Villoria
Software Mentions: 1
Published: almost 8 years ago

10.1016/j.stem.2017.09.004

Distinct Cell-Cycle Control in Two Different States of Mouse Pluripotency
Cited by: 61
Author(s): Menno ter Huurne, James Chappell, Stephen Dalton, Hendrik G. Stunnenberg
Software Mentions: 1
Published: about 9 years ago

10.1155/2015/863874

From Heuristic to Mathematical Modeling of Drugs Dissolution Profiles: Application of Artificial Neural Networks and Genetic Programming
Cited by: 17
Author(s): Aleksander Mendyk, Sinan Güres, Renata Jachowicz, Jakub Szlęk, Sebastian Polak, Barbara Wiśniowska, Peter Kleinebudde
Software Mentions: 1
Published: over 11 years ago

10.1039/d0sc03509b

Single-nucleotide resolution of <i>N</i>⁶-adenine methylation sites in DNA and RNA by nitrite sequencing
Cited by: 21
Author(s): Yasaman Mahdavi‐Amiri, Kimberley Chung, Ryan Hili
Software Mentions: 1
Published: over 5 years ago

10.1186/s13148-021-01134-1

Genome wide DNA methylation analysis of alveolar capillary dysplasia lung tissue reveals aberrant methylation of genes involved in development including the FOXF1 locus
Cited by: 5
Author(s): E Slot, Ruben Boers, Joachim Boers, Wilfred F. J. van IJcken, Dick Tibboel, Joost Gribnau, Robbert J. Rottier, Annelies de Klein
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93159-y

A momentary assessment study on emotional and biological stress in adult males and females with autism spectrum disorder
Cited by: 8
Author(s): Kim van der Linden, Claudia Simons, Wolfgang Viechtbauer, Emmy Ottenheijm, Thérèse van Amelsvoort, Machteld Marcelis
Software Mentions: 1
Published: about 5 years ago

10.1038/s42003-019-0500-9

Genome assembly of Nannochloropsis oceanica provides evidence of host nucleus overthrow by the symbiont nucleus during speciation
Cited by: 26
Author(s): Li Guo, Sijie Liang, Zhongyi Zhang, Huan Liu, Songwen Wang, Kehou Pan, Jian Xu, Xue Ren, Surui Pei, Guanpin Yang
Software Mentions: 1
Published: about 7 years ago

10.1038/s42003-020-01125-7

Improving the diversity of captured full-length isoforms using a normalized single-molecule RNA-sequencing method
Cited by: 8
Author(s): Yueming Hu, Xing-sheng Shu, Jiaxian Yu, Ming-an Sun, Zewei Chen, Xianming Liu, Qiongfang Fang, Wei Zhang, Xinjie Hui, Ying Ying, Li Fu, Desheng Lu, Rakesh Kumar, Yejun Wang
Software Mentions: 1
Published: about 6 years ago

10.3390/ani11082356

Estimation of Population-Specific Genetic Parameters Important for Long-Term Optimum Contribution Selection—Case Study on a Dairy Istrian Sheep Breed
Cited by: 2
Author(s): Ante Kasap, Jelena Ramljak, Marija Špehar
Software Mentions: 1
Published: about 5 years ago

10.1038/srep46578

Influenza C in Lancaster, UK, in the winter of 2014–2015
Cited by: 10
Author(s): Kate V. Atkinson, L.A. Bishop, Glenn Rhodes, Nicolas Salez, Neil R. McEwan, Matthew J. Hegarty, Julie Robey, Nicola Harding, Simon Wetherell, Robert M. Lauder, Roger W. Pickup, Mark Wilkinson, Derek Gatherer
Software Mentions: 1
Published: over 9 years ago

10.1038/s42003-019-0519-y

Amplification-free library preparation with SAFE Hi-C uses ligation products for deep sequencing to improve traditional Hi-C analysis
Cited by: 16
Author(s): Longjian Niu, Wei Shen, Yingzhang Huang, Na He, Yuedong Zhang, Jialei Sun, Wan J, Daxin Jiang, Manyun Yang, Yu Chung Tse, Li Li, Chaoqi Hou
Software Mentions: 1
Published: about 7 years ago

10.3389/fgene.2020.00710

Genomic Breed Composition of Selection Signatures in Brangus Beef Cattle
Cited by: 17
Author(s): Tiago do Prado Paim, El Hamidi Hay, C. Wilson, M. G. Thomas, L. A. Kuehn, Samuel Rezende Paiva, Concepta McManus, Harvey D. Blackburn
Software Mentions: 1
Published: about 6 years ago

10.1534/g3.117.300272

Long-Term Impact of Optimum Contribution Selection Strategies on Local Livestock Breeds with Historical Introgression Using the Example of German Angler Cattle
Cited by: 15
Author(s): Yu Wang, Dierck Segelke, Reiner Emmerling, Jörn Bennewitz, Robin Wellmann
Software Mentions: 1
Published: almost 9 years ago

10.1080/19420889.2020.1776568

Putative genome features of relic green alga-derived nuclei in dinoflagellates and future perspectives as model organisms
Cited by: 6
Author(s): Takuro Nakayama, Kazuya Takahashi, Ryoma Kamikawa, Mitsunori Iwataki, Yuji Inagaki, Goro Tanifuji
Software Mentions: 1
Published: over 6 years ago

10.1016/j.dib.2018.12.042

Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina
Cited by: 1
Author(s): Lian Chee Foong, Anthony Siong Hock Ho, Brandon Pei Hui Yeo, Yang Mooi Lim, Sheh May Tam
Software Mentions: 1
Published: over 7 years ago

10.1016/j.dib.2016.11.022

Dataset for a Dugesia japonica de novo transcriptome assembly, utilized for defining the voltage-gated like ion channel superfamily
Cited by: 12
Author(s): John D. Chan, Dan Zhang, Xiaolong Liu, Magdalena Zarowiecki, Matthew Berriman, Jonathan S. Marchant
Software Mentions: 1
Published: almost 10 years ago

10.1093/database/baab025

Human IRES Atlas: an integrative platform for studying IRES-driven translational regulation in humans
Cited by: 16
Author(s): Tzu-Hsien Yang, Chung‐Yu Wang, Hsiu-Chun Tsai, Cheng-Tse Liu
Software Mentions: 1
Published: over 5 years ago

10.1093/database/baz134

SGID: a comprehensive and interactive database of the silkworm
Cited by: 10
Author(s): Zhenglin Zhu, Zhufen Guan, Gexin Liu, Yawang Wang, Ze Zhang
Software Mentions: 1
Published: over 7 years ago

10.1016/j.devcel.2012.06.011

Smchd1-Dependent and -Independent Pathways Determine Developmental Dynamics of CpG Island Methylation on the Inactive X Chromosome
Cited by: 153
Author(s): Anne-Valérie Gendrel, Anwyn Apedaile, Heather Coker, Ausma Termanis, Ilona Zvetkova, Jonathan Godwin, Y. Amy Tang, Derek Huntley, Giovanni Montana, Steven L. Taylor, Eleni Giannoulatou, Edith Heard, Irina Stancheva, Neil Brockdorff
Software Mentions: 1
Published: about 14 years ago

10.15252/embj.2020105280

Intrinsically disordered protein PID‐2 modulates Z granules and is required for heritable piRNA‐induced silencing in the <i>Caenorhabditis elegans</i> embryo
Cited by: 11
Author(s): Maria Placentino, António Miguel de Jesus Domingues, Jan Schreier, Sabrina Dietz, Svenja Hellmann, Bruno F.M. de Albuquerque, Falk Butter, René F. Ketting
Software Mentions: 1
Published: almost 6 years ago

10.15252/emmm.201606523

Sequence variation in <i> <scp>PPP</scp> 1R13L </i> results in a novel form of cardio‐cutaneous syndrome
Cited by: 17
Author(s): Tzipora C. Falik‐Zaccai, Yiftah Barsheshet, Hanna Mandel, Meital Segev, Avraham Lorber, Shachaf Gelberg, Limor Kalfon, Shani Ben Haroush, Adel Shalata, Liat Gelernter‐Yaniv, Sarah Chaim, Dorith Raviv Shay, Morad Khayat, Michal Werbner, Itzhak Levi, Yishay Shoval, Galit Tal, Stavit A. Shalev, Eli Reuveni, Emily Avitan‐Hersh, Eugene Vlodavsky, Liat Appl‐Sarid, Dorit Goldsher, Reuven Bergman, Zvi Segal, Ora Bitterman‐Deutsch, Orly Avni
Software Mentions: 1
Published: over 9 years ago

10.15252/embr.201948925

Transfer of extracellular vesicle‐micro <scp>RNA</scp> controls germinal center reaction and antibody production
Cited by: 41
Author(s): Lola Fernández-Messina, Ana Rodríguez-Galán, Virginia G. de Yébenes, Cristina Gutiérrez-Vázquez, Sandra Tenreiro, Miguel C. Seabra, Almudena R. Ramiro, Francisco Sánchez-Madrid
Software Mentions: 1
Published: over 6 years ago

10.1186/s13027-016-0106-5

Changing Patterns of lung, liver, and head and neck non-AIDS-defining cancers relative to HIV status in Tanzania between 2002-2014
Cited by: 5
Author(s): Julee A. Campbell, Amr S. Soliman, Crispin Kahesa, Sioḃán D. Harlow, Diwani Msemo
Software Mentions: 1
Published: almost 10 years ago

10.1200/GO.20.00264

Feasibility Study of a Smartphone Application for Detecting Skin Cancers in People With Albinism
Cited by: 9
Author(s): Fidel Rubagumya, Sarah Kutika Nyagabona, Ahuka N Longombe, Achille Manirakiza, John R. Ngowi, Theoneste Maniragaba, Doriane Sabushimike, Sandra Urusaro, Diane A. Ndoli, Nazima Dharsee, Julius Mwaiselage, Daudi Mavura, Timothy P. Hanna, Nazik Hammad
Software Mentions: 1
Published: almost 6 years ago

10.1186/s13072-018-0210-4

Key role of piRNAs in telomeric chromatin maintenance and telomere nuclear positioning in Drosophila germline
Cited by: 31
Author(s): Elizaveta Radion, Valeriya Morgunova, Sergei Ryazansky, Natalia Akulenko, Sergey Lavrov, Yuri Abramov, Pavel A Komarov, Sergey I. Glukhov, Ivan Olovnikov, Alla Kalmykova
Software Mentions: 1
Published: about 8 years ago

10.1111/eva.12412

Genomic signatures among <i>Oncorhynchus nerka</i> ecotypes to inform conservation and management of endangered Sockeye Salmon
Cited by: 44
Author(s): Krista M. Nichols, Christine C. Kozfkay, Shawn R. Narum
Software Mentions: 1
Published: almost 10 years ago

10.12688/f1000research.15931.2

FastQ Screen: A tool for multi-genome mapping and quality control
Cited by: 682
Author(s): Steven Wingett, Simon Andrews
Software Mentions: 1
Published: about 8 years ago

10.1002/2211-5463.13139

CRISPR‐based knock‐in mutagenesis of the pioneer transcription factor FOXA1: optimization of strategies for multi‐allelic proteins in cancer cells
Cited by: 4
Author(s): Li Shen, Joseph P. Garay, Colby A. Tubbs, Hector L. Franco
Software Mentions: 1
Published: over 5 years ago

10.3389/fbioe.2015.00007

Computational Prediction of miRNA Genes from Small RNA Sequencing Data
Cited by: 33
Author(s): Wenjing Kang, Marc R. Friedländer
Software Mentions: 1
Published: over 11 years ago

10.3389/fcell.2021.679325

Meis2 Is Required for Inner Ear Formation and Proper Morphogenesis of the Cochlea
Cited by: 6
Author(s): María Beatriz Durán Alonso, Victor Vendrell, Iris López‐Hernández, Donna M. Martin, Fernando Giráldez, Laura Carramolino, Giovanna Giovinazzo, Enrique Vázquez, Miguel Torres, Thomas Schimmang
Software Mentions: 1
Published: over 5 years ago

10.3389/fendo.2019.00485

Growth Hormone Promotes in vitro Maturation of Human Oocytes
Cited by: 29
Author(s): Yue Li, Hui Liu, Qingqing Yu, Hongbin Liu, Tao Huang, Shigang Zhao, Jinlong Ma, Han Zhao
Software Mentions: 1
Published: about 7 years ago

10.3389/fgene.2020.00947

MicroRNA Expression Profiling of Bone Marrow–Derived Proangiogenic Cells (PACs) in a Mouse Model of Hindlimb Ischemia: Modulation by Classical Cardiovascular Risk Factors
Cited by: 3
Author(s): Michel Desjarlais, Sylvie Dussault, José Carlos Rivera, Sylvain Chemtob, Alain Rivard
Software Mentions: 1
Published: about 6 years ago

10.1530/REP-17-0592

Identification and verification of potential piRNAs from domesticated yak testis
Cited by: 16
Author(s): Jishang Gong, Quanwei Zhang, Qi Wang, Youji Ma, Jiaxiang Du, Yong Zhang, Xingxu Zhao
Software Mentions: 1
Published: over 8 years ago

10.1186/s12284-019-0287-9

Comparative study of the mycorrhizal root transcriptomes of wild and cultivated rice in response to the pathogen Magnaporthe oryzae
Cited by: 28
Author(s): Lei Tian, Chunguang Chang, Lina Ma, Fahad Nasir, Jianfeng Zhang, Weiqiang Li, Lam-Son Phan Tran, Chunjie Tian
Software Mentions: 1
Published: over 7 years ago

10.1038/sdata.2019.13

MicroRNA expression profiles across blood and different tissues in cattle
Cited by: 26
Author(s): Hui-Zeng Sun, Yanhong Chen, Le Luo Guan
Software Mentions: 1
Published: over 7 years ago

10.3402/meo.v21.32610

Speaking up: using OSTEs to understand how medical students address professionalism lapses
Cited by: 10
Author(s): Constance Tucker, Beth Choby, Andrew Moore, Robert Scott Parker, Benjamin R. Zambetti, Sarah Naids, Jillian Scott, Jennifer Loome, Sierra Gaffney
Software Mentions: 1
Published: over 10 years ago

10.1080/10872981.2019.1620544

Promoting innovation in the objective structured teaching examination and feedback: clustering teachers to aid teaching evaluation
Cited by: 4
Author(s): Ming-Chen Hsieh, Tsung-Ying Chen
Software Mentions: 1
Published: over 7 years ago

10.1038/srep22687

High throughput sequencing of small RNAs transcriptomes in two Crassostrea oysters identifies microRNAs involved in osmotic stress response
Cited by: 39
Author(s): Xuelin Zhao, Hong Yu, Lingfeng Kong, Shikai Liu, Qi Li
Software Mentions: 1
Published: over 10 years ago

10.1080/10872981.2017.1320186

Using Objective Structured Teaching Encounters (OSTEs) to prepare chief residents to be emotionally intelligent leaders
Cited by: 21
Author(s): Sara Cerrone, Patti Adelman, Salaahuddin Akbar, Andrew C. Yacht, Alice Fornari
Software Mentions: 1
Published: over 9 years ago

10.3390/mi12030260

Dry Film Photoresist-Based Microfabrication: A New Method to Fabricate Millimeter-Wave Waveguide Components
Cited by: 6
Author(s): Sadia Farjana, M. Ghaderi, Sofia Rahiminejad, Sjoerd Haasl, Peter Enoksson
Software Mentions: 1
Published: over 5 years ago

10.1038/srep32479

Effects of early feeding on the host rumen transcriptome and bacterial diversity in lambs
Cited by: 74
Author(s): Weimin Wang, Chong Li, Fadi Li, Xiaojuan Wang, Xiaoxue Zhang, Ting Liu, Fang Nian, Xiangpeng Yue, Fĕi Li, Xiangyu Pan, Yongfu La, Futao Mo, Fangbin Wang, Baosheng Li
Software Mentions: 1
Published: about 10 years ago

10.3390/mi12050546

Lung on a Chip Development from Off-Stoichiometry Thiol–Ene Polymer
Cited by: 3
Author(s): Roberts Rimša, Artis Galvanovskis, Jānis Plūme, Felikss Rumnieks, Karlis Grindulis, Gunita Paidere, Sintija Erentraute, Gatis Mozoļevskis, Artūrs Ābols
Software Mentions: 1
Published: over 5 years ago

10.1038/srep33510

Global analysis of transcription in castration-resistant prostate cancer cells uncovers active enhancers and direct androgen receptor targets
Cited by: 30
Author(s): Sari Toropainen, Einari A. Niskanen, Marjo Malinen, Päivi Sutinen, Minna U. Kaikkonen, Jorma J. Palvimo
Software Mentions: 1
Published: about 10 years ago

10.3389/fnins.2020.00095

Second Harmonic Generation Imaging of Collagen in Chronically Implantable Electrodes in Brain Tissue
Cited by: 13
Author(s): Corinne R. Esquibel, Kristy D. Wendt, Heui Chang Lee, Janak Gaire, Andrew J. Shoffstall, Morgan E. Urdaneta, Jenu V. Chacko, Sarah K. Brodnick, Kevin J. Otto, Jeffrey R. Capadona, Justin Williams, Kevin W. Eliceiri
Software Mentions: 1
Published: about 6 years ago

10.1038/srep35873

Comparative venomics of Psyttalia lounsburyi and P. concolor, two olive fruit fly parasitoids: a hypothetical role for a GH1 β-glucosidase
Cited by: 25
Author(s): Hugo Mathé-Hubert, Dominique Colinet, Emeline Deleury, Maya Belghazi, Marc Ravallec, Julie Poulain, Carole Dossat, Marylène Poirié, Jean‐Luc Gatti
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0152211

Shaking B Mediates Synaptic Coupling between Auditory Sensory Neurons and the Giant Fiber of Drosophila melanogaster
Cited by: 25
Author(s): Adeline Pézier, Sami H. Jezzini, Jonathan P. Bacon, Jonathan M. Blagburn
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0232300

A new linear regression-like residual for survival analysis, with application to genome wide association studies of time-to-event data
Cited by: 6
Author(s): Veronica J. Vieland, Sang-Cheol Seok, William C. Stewart
Software Mentions: 1
Published: over 6 years ago