10.1371/journal.pone.0019304

Diagnosis of Indian Visceral Leishmaniasis by Nucleic Acid Detection Using PCR
Cited by: 69
Author(s): Pankaj Srivastava, Sanjana Mehrotra, Puja Tiwary, Jaya Chakravarty, Shyam Sundar
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0049705

Whole-Transcriptome Sequencing Identifies Novel IRF2BP2-CDX1 Fusion Gene Brought about by Translocation t(1;5)(q42;q32) in Mesenchymal Chondrosarcoma
Cited by: 75
Author(s): Kaja Beate Nyquist, Ioannis Panagopoulos, Jim Thorsen, Lisbeth Haugom, Ludmila Gorunova, Bodil Bjerkehagen, Alexander Fosså, Marianne Guriby, Torfinn Nome, Ragnhild Lothe, Rolf Inge Skotheim, Sverre Heim, Francesca Micci
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0103020

IthaGenes: An Interactive Database for Haemoglobin Variations and Epidemiology
Cited by: 155
Author(s): Petros Kountouris, Carsten W. Lederer, Pavlos Fanis, Xenia Feleki, John Old, Marina Kleanthous
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0019212

Domestication of Transposable Elements into MicroRNA Genes in Plants
Cited by: 94
Author(s): Li V. Yang, Chaoqun Li, Jie Xia, Youxin Jin
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0032590

Gene Expression of the Tumour Suppressor LKB1 Is Mediated by Sp1, NF-Y and FOXO Transcription Factors
Cited by: 34
Author(s): Nicolas Lützner, Johanna De-Castro Arce, Frank Rösl
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0035839

The RIP140 Gene Is a Transcriptional Target of E2F1
Cited by: 22
Author(s): Aurélie Docquier, Patrick Augereau, Marion Lapierre, Pierre-Olivier Harmand, Éric Badia, Jean-Sébastien Annicotte, Lluís Fajas, Vincent Cavaillès
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0136749

Genome-Wide Scan for Visceral Leishmaniasis in Mixed-Breed Dogs Identifies Candidate Genes Involved in T Helper Cells and Macrophage Signaling
Cited by: 19
Author(s): Yuri Tani Utsunomiya, Érica S. Ribeiro, Amanda Pífano Neto Quintal, Juliano Rodrigues Sangalli, Valquiria R. Gazola, Henrique Borges de Paula, Cristiana T. Trinconi, Valéria Marçal Felix de Lima, S. H. V. Perri, Jeremy F. Taylor, Robert D. Schnabel, Tad S. Sonstegard, José Fernando Garcia, Cáris Maroni Nunes
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0018969

Variation in Array Size, Monomer Composition and Expression of the Macrosatellite DXZ4
Cited by: 19
Author(s): Deanna C. Tremblay, Shawn C. Moseley, Brian P. Chadwick
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0129811

A Novel Locus for Ectodermal Dysplasia of Hair, Nail and Skin Pigmentation Anomalies Maps to Chromosome 18p11.32-p11.31
Cited by: 2
Author(s): Rabia Habib, Muhammad Ansar, Manuel Mattheisen, Muhammad Shahid, Ghazanfar Ali, Wasim Ahmad, Regina C. Betz
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0153333

Neofunctionalization of Chromoplast Specific Lycopene Beta Cyclase Gene (CYC-B) in Tomato Clade
Cited by: 13
Author(s): Vijee Mohan, Arun K. Pandey, Yellamaraju Sreelakshmi, Rameshwar Sharma
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0046642

A Fish-Specific Transposable Element Shapes the Repertoire of p53 Target Genes in Zebrafish
Cited by: 17
Author(s): Lucia Micale, Maria Nicla Loviglio, Marta Manzoni, Carmela Fusco, Bartolomeo Augello, Eugenia Migliavacca, Grazia Cotugno, Eugenio Monti, Giuseppe Borsani, Alexandre Reymond, Giuseppe Merla
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0197322

Tissue inhibitor of metalloproteinases 1 enhances rod survival in the rd1 mouse retina
Cited by: 8
Author(s): Hwa Sun Kim, Andrew Vargas, Yun Sung Eom, Justin Li, Kyra Yamamoto, Cheryl M. Craft, Eun-Jin Lee
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0200854

Genome-wide analysis of ATP binding cassette (ABC) transporters in tomato
Cited by: 61
Author(s): Peter Amoako Ofori, Ayaka Mizuno, Mami Suzuki, Enrico Martinoia, Stefan Reuscher, Koh Aoki, Daisuke Shibata, Shungo Otagaki, Shogo Matsumoto, Katsuhiro Shiratake
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0035660

The Cobalamin-Binding Protein in Zebrafish Is an Intermediate between the Three Cobalamin-Binding Proteins in Human
Cited by: 23
Author(s): Eva Greibe, Sergey N. Fedosov, Ebba Nexö
Software Mentions: 1
Published: over 14 years ago

10.1371/journal.pone.0023087

Copy Number Variation across European Populations
Cited by: 26
Author(s): Wanting Chen, Caroline Hayward, Alan F. Wright, Andrew A. Hicks, Véronique Vitart, Sara Knott, Sarah H. Wild, Peter P. Pramstaller, James F. Wilson, Igor Rudan, David J. Porteous
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0056195

Bridging Cancer Biology with the Clinic: Relative Expression of a GRHL2-Mediated Gene-Set Pair Predicts Breast Cancer Metastasis
Cited by: 37
Author(s): Xinan Yang, Prabhakaran Vasudevan, Vishwas Parekh, Aleks Penev, John M. Cunningham
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0014276

Molecular Evolution and Functional Divergence of the Cytochrome P450 3 (CYP3) Family in Actinopterygii (Ray-Finned Fish)
Cited by: 27
Author(s): Jun Yan, Zhonghua Cai
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0065016

N-Linked Glycosylation Supports Cross-Talk between Receptor Tyrosine Kinases and Androgen Receptor
Cited by: 40
Author(s): Harri M. Itkonen, Ian G. Mills
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0190834

Identification and functional analysis of SOX10 phosphorylation sites in melanoma
Cited by: 20
Author(s): Julia C. Cronin, Stacie K. Loftus, Laura L. Baxter, Steve Swatkoski, Marjan Guček, William J. Pavan
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pcbi.1005026

Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data
Cited by: 30
Author(s): Yuheng Lu, Christina Leslie
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pgen.1004353

Population Genomic Analysis of Ancient and Modern Genomes Yields New Insights into the Genetic Ancestry of the Tyrolean Iceman and the Genetic Structure of Europe
Cited by: 86
Author(s): Martin Sikora, Meredith L. Carpenter, Andrés Moreno‐Estrada, Brenna M. Henn, Peter A. Underhill, Federico Sánchez-Quinto, Ilenia Zara, Maristella Pitzalis, Carlo Sidore, Fabio Busonero, Andrea Maschio, Andrea Angius, Chris Jones, Javier Mendoza‐Revilla, Georgi Nekhrizov, Dessislava Dimitrova, Nikola Theodossiev, Timothy T. Harkins, Andreas Keller, Frank Maixner, Albert Zink, Gonçalo R. Abecasis, Serena Sanna, Francesco Cucca, Carlos D. Bustamante
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pgen.1004553

EF-P Dependent Pauses Integrate Proximal and Distal Signals during Translation
Cited by: 74
Author(s): Sara Elgamal, Assaf Katz, Steven J. Hersch, David E. Newsom, Peter White, William Wiley Navarre, Michael Ibba
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pgen.1004216

CDKN2D-WDFY2 Is a Cancer-Specific Fusion Gene Recurrent in High-Grade Serous Ovarian Carcinoma
Cited by: 40
Author(s): K. P. Kannan, Cristian Coarfa, Kimal Rajapakshe, Shannon M. Hawkins, Martin M. Matzuk, Aleksandar Milosavljevic, Laising Yen
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pgen.1005637

Mosaic and Intronic Mutations in TSC1/TSC2 Explain the Majority of TSC Patients with No Mutation Identified by Conventional Testing
Cited by: 193
Author(s): Magdalena E. Tyburczy, Kira Dies, Jennifer Glass, Susana Camposano, Yvonne Chekaluk, Aaron R. Thorner, Gang Li, Darcy A. Krueger, David Neal Franz, Elizabeth A. Thiele, Mustafa Şahin, David J. Kwiatkowski
Software Mentions: 1
Published: almost 11 years ago

10.7717/peerj.7839

Soil bacterial biodiversity is driven by long-term pasture management, poultry litter, and cattle manure inputs
Cited by: 31
Author(s): Yichao Yang, Amanda J. Ashworth, Jennifer M. DeBruyn, Cammy D. Willett, Lisa M. Durso, Kimberly J. Cook, P. Moore, Phillip R. Owens
Software Mentions: 1
Published: almost 7 years ago

10.7717/peerj.11340

New insight into the divergent responses of plants to warming in the context of root endophytic bacterial and fungal communities
Cited by: 6
Author(s): Xiaoting Wei, Fengyan Jiang, Bing Han, Hui Zhang, Ding Huang, Xinqing Shao
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.5619

Plant dominance in a subalpine montane meadow: biotic vs. abiotic controls of subordinate diversity within and across sites
Cited by: 3
Author(s): Erika LaPlante, Lara Souza
Software Mentions: 1
Published: almost 8 years ago

10.7717/peerj.4612

Evaluation of a therapy for Idiopathic Chronic Enterocolitis in rhesus macaques (<i>Macaca mulatta</i>) and linked microbial community correlates
Cited by: 5
Author(s): Joshua Taylor, Erik L. Clarke, Kate Baker, Abigail Lauder, Dorothy Kim, Aubrey Bailey, Gary D. Wu, Ronald G. Collman, Lara A. Doyle-Meyers, Kasi Russell‐Lodrigue, James Blanchard, Frederic D. Bushman, Rudolf P. Bohm
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1008911

The role of gene dosage in budding yeast centrosome scaling and spontaneous diploidization
Cited by: 5
Author(s): Jingjing Chen, Zhiyong Xiong, Danny E. Miller, Zulin Yu, Scott McCroskey, W. David Bradford, Ann M. Cavanaugh, Sue L. Jaspersen
Software Mentions: 1
Published: over 5 years ago

10.7717/peerj.3437

Postmortem succession of gut microbial communities in deceased human subjects
Cited by: 86
Author(s): Jennifer M. DeBruyn, Kathleen A. Hauther
Software Mentions: 1
Published: about 9 years ago

10.1371/journal.pgen.1001236

Noisy Splicing Drives mRNA Isoform Diversity in Human Cells
Cited by: 264
Author(s): Joseph K. Pickrell, Athma A. Pai, Yoav Gilad, Jonathan K. Pritchard
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pgen.1005607

Mapping of Craniofacial Traits in Outbred Mice Identifies Major Developmental Genes Involved in Shape Determination
Cited by: 67
Author(s): Luisa F. Pallares, Peter Carbonetto, Shyam Gopalakrishnan, Clarissa C. Parker, Cheryl Ackert‐Bicknell, Abraham A. Palmer, Diethard Tautz
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pgen.1007111

Novel pedigree analysis implicates DNA repair and chromatin remodeling in multiple myeloma risk
Cited by: 26
Author(s): Rosalie Griffin, Todd M. Darlington, Xiaomu Wei, Michael J. Madsen, Alun Thomas, Karen Curtin, Hilary Coon, Venkatesh Rajamanickam, Justin Musinsky, David Jayabalan, Djordje Atanackovic, S. Vincent Rajkumar, Shaji Kumar, Susan L. Slager, Mridu Middha, Perrine Galia, Delphine Demangel, Mohamed E. Salama, Joseph Vijai, James McKay, Robert J. Klein, Steven M. Lipkin, Charles Dumontet, Celine M. Vachon, Nicola J. Camp
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1006601

Excess of genomic defects in a woolly mammoth on Wrangel island
Cited by: 103
Author(s): Rebekah L. Rogers, Montgomery Slatkin
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.804

Wild plant species growing closely connected in a subalpine meadow host distinct root-associated bacterial communities
Cited by: 63
Author(s): Kristin Aleklett, Jonathan W. Leff, Noah Fierer, Miranda M. Hart
Software Mentions: 1
Published: over 11 years ago

10.1186/1478-7547-7-16

Estimating average inpatient and outpatient costs and childhood pneumonia and diarrhoea treatment costs in an urban health centre in Zambia
Cited by: 33
Author(s): Lumbwe Chola, Bjarne Robberstad
Software Mentions: 1
Published: over 17 years ago

10.7717/peerj.1747

Microphytoplankton variations during coral spawning at Los Roques, Southern Caribbean
Cited by: 1
Author(s): Francoise Cavada-Blanco, Ainhoa L. Zubillaga, Carolina Bastidas
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pntd.0001811

Whole Genome Sequencing of Field Isolates Provides Robust Characterization of Genetic Diversity in Plasmodium vivax
Cited by: 65
Author(s): E. Ricky Chan, Didier Ménard, Peter H. David, Arsène Ratsimbasoa, Saorin Kim, Pheaktra Chim, Catherine Do, Benoît Witkowski, Odile Mercereau–Puijalon, Peter A. Zimmerman, David Serre
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pntd.0005091

Independent Origin and Global Distribution of Distinct Plasmodium vivax Duffy Binding Protein Gene Duplications
Cited by: 42
Author(s): Jessica B. Hostetler, Eugenia Lo, Usheer Kanjee, Chanaki Amaratunga, Seila Suon, Sokunthea Sreng, Sivanna Mao, Delenasaw Yewhalaw, Anjali Mascarenhas, Dominic P. Kwiatkowski, Marcelo U. Ferreira, Pradipsinh K. Rathod, Guiyun Yan, Rick M. Fairhurst, Manoj T. Duraisingh, Julian C. Rayner
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0192377

Prospecting for viral natural enemies of the fire ant Solenopsis invicta in Argentina
Cited by: 21
Author(s): Steven M. Valles, Sanford D. Porter, Luis A. Calcaterra
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0192062

Comparative analysis of genetic diversity and differentiation of cauliflower (Brassica oleracea var. botrytis) accessions from two ex situ genebanks
Cited by: 23
Author(s): Eltohamy A. A. Yousef, Thomas Müller, Andreas Börner, Karl Schmid
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0215912

Characterization of the Candida orthopsilosis agglutinin-like sequence (ALS) genes
Cited by: 13
Author(s): Lisa Lombardi, Marina Zoppo, Cosmeri Rizzato, Daria Bottai, Álvaro González Hernández, Lois L. Hoyer, Arianna Tavanti
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0115152

Profiling of Exome Mutations Associated with Progression of HBV-Related Hepatocellular Carcinoma
Cited by: 16
Author(s): Hyun Goo Woo, Soon Sun Kim, Hyunwoo Cho, So Mee Kwon, Hyo Jung Cho, Sung Jun Ahn, Eun Sung Park, Ju Seog Lee, Sung Won Cho, Jae Youn Cheong
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0137690

Molecular Profiling of a Rare Rosette-Forming Glioneuronal Tumor Arising in the Spinal Cord
Cited by: 26
Author(s): Lucas Tadeu Bidinotto, Cristovam Scapulatempo‐Neto, Alan Mackay, Gisele Caravina de Almeida, Bernd W. Scheithauer, Gustavo Nóriz Berardinelli, Raul Torrieri, Carlos Afonso Clara, Leonir Terezinha Feltrin, Marta Viana-Pereira, Marileila Varella‐Garcia, Chris Jones, Rui Manuel Reis
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0106388

Genetic Diagnosis of Two Dopa-Responsive Dystonia Families by Exome Sequencing
Cited by: 9
Author(s): Zhanfang Sun, Yuhan Zhang, Jifeng Guo, Qiying Sun, Junpu Mei, Hanlin Zhou, Liping Guan, Jing Tian, Zhengmao Hu, Jia‐Da Li, Kun Xia, Xinxiang Yan, Beisha Tang
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0210529

Criteria for evaluating molecular markers: Comprehensive quality metrics to improve marker-assisted selection
Cited by: 53
Author(s): John Damien Platten, Joshua N. Cobb, Rochelle Endegado Zantua
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0139582

Genome-Wide Epigenetic Regulation of Gene Transcription in Maize Seeds
Cited by: 28
Author(s): Xiaoduo Lu, Weixuan Wang, Wen Ren, Zhenguang Chai, Wu Guo, Rumei Chen, Lei Wang, Jun Zhao, Zhihong Lang, Yanting Fan, Jiuran Zhao, Chunyi Zhang
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0102645

The South Asian Genome
Cited by: 41
Author(s): John C. Chambers, James Abbott, Weihua Zhang, Ernest Turro, William R. Scott, Sian-Tsung Tan, Uzma Afzal, Saima Afaq, Marie Loh, Benjamin Lehne, Paul F. O’Reilly, Kyle J. Gaulton, Richard D. Pearson, Xinzhong Li, Anita Lavery, Jana Vandrovcová, Mark N. Wass, Kathryn Miller, Joban Sehmi, Laticia Oozageer, Ishminder K. Kooner, Abtehale Al-Hussaini, Rebecca Mills, Jagvir Grewal, Vasileios F. Panoulas, Arie Y. Lewin, Korrinne Northwood, Gurpreet Singh Wander, Frank Geoghegan, Yingrui Li, Jun Wang, Timothy J. Aitman, Mark I. McCarthy, James A. Scott, Sarah Butcher, Paul Elliott, Jaspal S. Kooner
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0019838

The Sensitivity of Massively Parallel Sequencing for Detecting Candidate Infectious Agents Associated with Human Tissue
Cited by: 55
Author(s): Richard A. Moore, René L. Warren, Jamie Freeman, Julia Gustavsen, Caroline Chénard, Jan M. Friedman, Curtis A. Suttle, Yongjun Zhao, Robert A. Holt
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0122636

Target-Dependent Enrichment of Virions Determines the Reduction of High-Throughput Sequencing in Virus Discovery
Cited by: 26
Author(s): Randi Holm Jensen, Sarah Mollerup, Tobias Mourier, Thomas Arn Hansen, Helena Fridholm, Lars Peter Nielsen, Eske Willerslev, Anders J. Hansen, Lasse Vinner
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0241997

High genetic diversity of ancient horses from the Ukok Plateau
Cited by: 5
Author(s): Nadezhda V. Vorobieva, Alexey I Makunin, Anna S. Druzhkova, Mariya A. Kusliy, Владимир Трифонов, Kseniya O. Popova, N.V. Polosmak, В.И. Молодин, S. Vasiliev, M.V. Shunkov, Alexander S. Graphodatsky
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0164212

Paternal Age Explains a Major Portion of De Novo Germline Mutation Rate Variability in Healthy Individuals
Cited by: 40
Author(s): Simon L. Girard, Cynthia V. Bourassa, Louis‐Philippe Lemieux Perreault, Marc‐André Legault, Amina Barhdadi, Amirthagowri Ambalavanan, Mara Brendgen, Frank Vitaro, Anne Noreau, Ginette Dionne, Richard E. Tremblay, Patrick A. Dion, Michel Boivin, Marie‐Pierre Dubé, Guy A. Rouleau
Software Mentions: 1
Published: almost 10 years ago

10.3390/cancers13102446

Generation of Non-Small Cell Lung Cancer Patient-Derived Xenografts to Study Intratumor Heterogeneity
Cited by: 4
Author(s): Zoi Kanaki, Alexandra Voutsina, Athina Markou, Ioannis S. Pateras, Konstantinos Potaris, Margaritis Avgeris, Periklis Makrythanasis, Emmanouil Athanasiadis, Ioannis Vamvakaris, Eleni Patsea, Konstantinos Vachlas, Evi Lianidou, Vassilis Georgoulias, Athanasios Κotsakis, Apostolos Klinakis
Software Mentions: 1
Published: over 5 years ago

10.3389/fnhum.2013.00605

Approaches to local connectivity in autism using resting state functional connectivity MRI
Cited by: 87
Author(s): Jose O. Maximo, Christopher L. Keown, Aarti Nair, Ralph‐Axel Müller
Software Mentions: 1
Published: over 13 years ago

10.3390/curroncol28040234

36th Annual CAPO Conference: Advocating for All: Psychosocial Oncology at the Intersections of Equity, Diversity, and Inclusion, 8–10 June 2021
Cited by: 1
Author(s): Peter Traversa
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.8705

Alternative dietary protein and water temperature influence the skin and gut microbial communities of yellowtail kingfish (<i>Seriola lalandi</i>)
Cited by: 19
Author(s): Jack Horlick, Mark A. Booth, Sasha G. Tetu
Software Mentions: 1
Published: over 6 years ago

10.7717/peerj.2052

Response of marine copepods to a changing tropical environment: winners, losers and implications
Cited by: 17
Author(s): Li Lee Chew, Ving Ching Chong
Software Mentions: 1
Published: about 10 years ago

10.7717/peerj.11522

Freshwater-adapted sea bass <i>Dicentrarchus labrax</i> feeding frequency impact in a lettuce <i>Lactuca sativa</i> aquaponics system
Cited by: 5
Author(s): Paraskevi Stathopoulou, Panagiotis Berillis, Nikolaos Vlahos, Eleni Nikouli, Konstantinos Ar. Kormas, Efi Levizou, Ν. Katsoulas, Eleni Mente
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.4194

Crustacean amphipods from marsh ponds: a nutritious feed resource with potential for application in Integrated Multi-Trophic Aquaculture
Cited by: 21
Author(s): Pablo Jiménez‐Prada, Ismael Hachero‐Cruzado, Inmaculada Giráldez, Catalina Fernández‐Díaz, César Vílas, José Pedro Cañavate, José M. Guerra-García
Software Mentions: 1
Published: over 8 years ago

10.3390/pharmaceutics12060515

Cationic Dendrimer G2-S16 Inhibits Herpes Simplex Type 2 Infection and Protects Mice Vaginal Microbiome
Cited by: 9
Author(s): Carlos Enrique Guerrero-Beltrán, Inmaculada García-Heredia, Rafael Ceña‐Diez, Ignacio Rodríguez‐Izquierdo, Ma Jesús Serramía, Francisco Martínez-Hernández, Mónica Lluesma-Gomez, Manuel Martínez‐García, María Ángeles Muñoz‐Fernández
Software Mentions: 1
Published: about 6 years ago

10.1007/s00425-021-03637-w

Factors contributing to ice nucleation and sequential freezing of leaves in wheat
Cited by: 4
Author(s): David P. Livingston, Annick Bertrand, Michael Wisniewski, Ripley H. Tisdale, Tan D. Tuong, L. V. Gusta, Timothy S. Artlip
Software Mentions: 1
Published: over 5 years ago

10.3390/plants9121797

Salinity-Induced Changes of Photosynthetic Performance, Lawsone, VOCs, and Antioxidant Metabolism in Lawsonia inermis L.
Cited by: 3
Author(s): Basma Najar, Laura Pistelli, Ilaria Marchioni, Luisa Pistelli, Beatrice Muscatello, Marinella De Leo, Andrea Scartazza
Software Mentions: 1
Published: over 5 years ago

10.3390/plants8060169

Fungal Communities Associated with Peacock and Cercospora Leaf Spots in Olive
Cited by: 19
Author(s): Carla Varanda, Patrick Materatski, Miguel Landum, Maria Doroteia Campos, Maria do Rosário Félix
Software Mentions: 1
Published: about 7 years ago

10.3390/plants10050942

Influence of Land Use on the C and N Status of a C4 Invasive Grass in a Semi-Arid Region: Implications for Biomonitoring
Cited by: 1
Author(s): Edison A. Díaz-Álvarez, Erick de la Barrera
Software Mentions: 1
Published: over 5 years ago

10.3390/plants9101297

Intraspecific Variation in Nectar Chemistry and Its Implications for Insect Visitors: The Case of the Medicinal Plant, Polemonium Caeruleum L.
Cited by: 12
Author(s): Justyna Ryniewicz, Mateusz Skłodowski, Magdalena Chmur, Andrzej Bajguz, Katarzyna Roguz, Agata Roguz, Marcin Zych
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pbio.3000788

Glycan cross-feeding supports mutualism between Fusobacterium and the vaginal microbiota
Cited by: 28
Author(s): Kavita Agarwal, Linda J. Robinson, Somya Aggarwal, Lynne Foster, Ariel Hernandez-Leyva, Hueylie Lin, Brett A. Tortelli, Valerie P. O’Brien, Liza Miller, Andrew L. Kau, Hilary Reno, Nicole M. Gilbert, Warren G. Lewis, Amanda L. Lewis
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pcbi.1008913

A statistical model for describing and simulating microbial community profiles
Cited by: 19
Author(s): Siyuan Ma, Boyu Ren, Himel Mallick, Yo Sup Moon, Emma Schwager, Sagun Maharjan, Timothy L. Tickle, Yiren Lu, Rachel N. Carmody, Eric A. Franzosa, Lucas Janson, Curtis Huttenhower
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pntd.0008531

Dengue infection modulates locomotion and host seeking in Aedes aegypti
Cited by: 28
Author(s): Anaïs Karine Tallon, Marcelo G. Lorenzo, Luciano Andrade Moreira, Luís Eduardo Martinez Villegas, Sharon R. Hill, Rickard Ignell
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pntd.0002453

Microarray Analysis of Microbiota of Gingival Lesions in Noma Patients
Cited by: 28
Author(s): Antoine Huyghe, Patrice François, Andrea Mombelli, Manuela Tangomo, Myriam Girard, Denise Baratti-Mayer, Ignacio Bolívar, Didier Pittet, Jacques Schrenzel
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0233189

Large-scale metabarcoding analysis of epipelagic and mesopelagic copepods in the Pacific
Cited by: 17
Author(s): Junya Hirai, Aiko Tachibana, Atsushi Tsuda
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0158785

Density of Key-Species Determines Efficiency of Macroalgae Detritus Uptake by Intertidal Benthic Communities
Cited by: 15
Author(s): Agnes M. L. Karlson, Clarisse Niemand, Candida Savage, Conrad A. Pilditch
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0103641

The Colonization Dynamics of the Gut Microbiota in Tilapia Larvae
Cited by: 67
Author(s): Christos Giatsis, Detmer Sipkema, Hauke Smidt, J.A.J. Verreth, Marc Verdegem
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0043843

Diel Variability in Seawater pH Relates to Calcification and Benthic Community Structure on Coral Reefs
Cited by: 135
Author(s): Nichole N. Price, Todd R. Martz, Russell E. Brainard, Jennifer E. Smith
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0177415

Proteomic analysis in the Dufour’s gland of Africanized Apis mellifera workers (Hymenoptera: Apidae)
Cited by: 3
Author(s): Aparecida das Dores Teixeira, Patrícia Dias Games, Benjamin B. Katz, John M. Tomich, José Cola Zanúncio, José Éduardo Serrão
Software Mentions: 1
Published: about 9 years ago

10.1038/s42003-018-0034-6

Light-activated cell identification and sorting (LACIS) for selection of edited clones on a nanofluidic device
Cited by: 34
Author(s): Annamaria Mocciaro, Theodore L. Roth, Hayley M. Bennett, Magali Soumillon, Abhik Shah, Joseph Hiatt, Kevin Chapman, Alexander Marson, Grégory Lavieu
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0015854

Variation in Symbiodinium ITS2 Sequence Assemblages among Coral Colonies
Cited by: 85
Author(s): Michael Stat, Christopher E. Bird, Xavier Pochon, Luis Chasqui, Leonard J. Chauka, Gregory T. Concepcion, Dan Logan, Misaki Takabayashi, Robert J. Toonen, Ruth D. Gates
Software Mentions: 1
Published: over 15 years ago

10.1002/ece3.5496

Evolution and diversity of two cisco forms in an outlet of glacial Lake Algonquin
Cited by: 13
Author(s): Gabriel Piette‐Lauzière, Allan H. Bell, Mark S. Ridgway, Jean Turgeon
Software Mentions: 1
Published: about 7 years ago

10.1002/ece3.2574

Transcriptomic comparison of invasive bigheaded carps ( Hypophthalmichthys nobilis and Hypophthalmichthys molitrix ) and their hybrids
Cited by: 5
Author(s): Jun Wang, James T. Lamer, Sarah Gaughan, Michael Wachholtz, Chenghui Wang, Guoquing Lu
Software Mentions: 1
Published: almost 10 years ago

10.1530/EC-20-0460

Genetic predisposition to neural crest-derived tumors: revisiting the role of KIF1B
Cited by: 4
Author(s): C. Bauters, Emmanuelle Leteurtre, B. Carnaille, Christine Do Cao, Stéphanie Espiard, Malo Penven, Evelyne Destailleur, Isabelle Szuster, Tonio Lovecchio, Julie Leclerc, Frédéric Frénois, Emmanuel Esquivel, Patricia L.M. Dahia, Emilie Ait‐Yahya, Michel Crépin, Pascal Pigny
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41431-019-0551-x

A bird’s-eye view of Italian genomic variation through whole-genome sequencing
Cited by: 26
Author(s): Massimiliano Cocca, Caterina Barbieri, Maria Pina Concas, Antonietta Robino, Marco Brumat, Ilaria Gandin, Matteo Trudu, Cinzia Sala, Dragana Vuckovic, Giorgia Girotto, Giuseppe Matullo, Ozren Polašek, Ivana Kolčić, Paolo Gasparini, Nicole Soranzo, Daniela Toniolo, Massimo Mezzavilla
Software Mentions: 1
Published: over 6 years ago

10.1002/evl3.29

Inconsistent reproductive isolation revealed by interactions between<i>Catostomus</i>fish species
Cited by: 46
Author(s): Elizabeth G. Mandeville, Thomas L. Parchman, Kevin G. Thompson, Robert I. Compton, Kevin R. Gelwicks, Se Jin Song, C. Alex Buerkle
Software Mentions: 1
Published: almost 9 years ago

10.12688/f1000research.1-3.v1

Low budget analysis of Direct-To-Consumer genomic testing familial data
Cited by: 11
Author(s): Gustavo Glusman, Mike Cariaso, Rafael C. Jiménez, Daniel Swan, Bastian Greshake, Jong Bhak, Darren W. Logan, Manuel Corpas
Software Mentions: 1
Published: about 14 years ago

10.1002/2211-5463.13225

Establishment and characterization of a primary cell culture derived from external auditory canal squamous cell carcinoma
Cited by: 3
Author(s): Yuki Sekino, Akira Imaizumi, Noritaka Komune, Masahiro Ono, Kuniaki Sato, S. Masuda, Akiko Fujimura, Kensuke Koike, Takahiro Hongo, Ryutaro Uchi, Hideya Onishi, Takashi Nakagawa
Software Mentions: 1
Published: about 5 years ago

10.3389/fcell.2019.00201

NUMT Confounding Biases Mitochondrial Heteroplasmy Calls in Favor of the Reference Allele
Cited by: 35
Author(s): Hannah Maude, Mira S. Davidson, Natalie Charitakis, Léo P. M. Diaz, William H. T. Bowers, Eva Gradovich, Toby Andrew, Derek Huntley
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2020.00440

The Whole-Genome Sequencing and Hybrid Assembly of Mytilus coruscus
Cited by: 38
Author(s): Ronghua Li, Weijia Zhang, Junkai Lu, Zhouyi Zhang, Changkao Mu, Weiwei Song, Hervé Migaud, Michaël Bekaert
Software Mentions: 1
Published: over 6 years ago

10.3389/fonc.2019.00450

Utility of Immunophenotypic Measurable Residual Disease in Adult Acute Myeloid Leukemia—Real-World Context
Cited by: 12
Author(s): Nikhil Patkar, Chinmayee Kakirde, Prasanna Bhanshe, Shalik Ram Joshi, Shruti Chaudhary, Yajamanam Badrinath, Sitaram Ghoghale, Nilesh Deshpande, Shraddha Kadechkar, Gaurav Chatterjee, Sadhana Kannan, Dhanalaxmi Shetty, Anant Gokarn, Sachin Punatkar, Avinash Bonda, Lingaraj Nayak, Hasmukh Jain, Bhausaheb Bagal, Hari Menon, Manju Sengar, Syed Khizer Hasan, Navin Khattry, Prashant Tembhare, Sumeet Gujral, Papagudi Ganesan Subramanian
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2018.00724

Red Clover (Trifolium pratense) and Zigzag Clover (T. medium) – A Picture of Genomic Similarities and Differences
Cited by: 18
Author(s): Jana Dluhošová, Jan Ištvánek, J. Nedêlník, Jana Řepková
Software Mentions: 1
Published: about 8 years ago

10.3389/fpls.2016.02055

Simultaneous Identification of Multiple Causal Mutations in Rice
Cited by: 35
Author(s): Yan Wang, Zhufeng Chen, Jian Lü, Chengpei Xu, Gang Xie, Yiqi Li, Xing Wang Deng, Hang He, Xiaoyan Tang
Software Mentions: 1
Published: over 9 years ago

10.3389/fvets.2019.00175

Genetic and Phenotypic Characterization of the Etiological Agent of Canine Orchiepididymitis Smooth Brucella sp. BCCN84.3
Cited by: 10
Author(s): Caterina Guzmán-Verri, Marcela Suárez-Esquivel, Nazareth Ruíz-Villalobos, Michel S. Zygmunt, Mathieu Gonnet, Elena Campos, Eunice Víquez-Ruiz, Carlos Chacón-Díaz, Beatriz Aragón-Aranda, Raquel Conde-Álvarez, Ignacio Moriyón, J.M. Blasco, Pilar M. Muñoz, Kate S. Baker, Nicholas R. Thomson, Axel Cloeckaert, Edgardo Moreno
Software Mentions: 1
Published: about 7 years ago

10.1186/cc9260

Intensive care diaries reduce new onset post traumatic stress disorder following critical illness: a randomised, controlled trial
Cited by: 388
Author(s): Christina Jones, Carl Bäckman, Maurizia Capuzzo, Ingrid Egerod, Hans Flaatten, Cristina Granja, Christian Rylander, Richard D. Griffiths
Software Mentions: 1
Published: over 16 years ago

10.1186/gb-2005-6-5-r47

Cited by: 263
Author(s): Ilya G. Goldberg, Chris Allan, Jean‐Marie Burel, Doug Creager, Andrea Falconi, Harry Hochheiser, Josiah Johnston, Jeff Mellen, Peter K. Sorger, Jason R. Swedlow
Software Mentions: 1
Published: over 21 years ago

10.1186/2047-217X-2-5

Sequence squeeze: an open contest for sequence compression
Cited by: 14
Author(s): Richard Holland, Nick Lynch
Software Mentions: 1
Published: over 13 years ago

10.3390/s21155160

Energy and Performance Analysis of Lossless Compression Algorithms for Wireless EMG Sensors
Cited by: 7
Author(s): Giorgio Biagetti, Paolo Crippa, Laura Falaschetti, Ali Mansour, Claudio Turchetti
Software Mentions: 1
Published: about 5 years ago

10.2196/13559

Development and Implementation of the Portable Operating Room Tracker App With Vital Signs Streaming Infrastructure: Operational Feasibility Study
Cited by: 6
Author(s): Matthias Görges, Nicholas West, Chris Petersen, J. Mark Ansermino
Software Mentions: 1
Published: about 7 years ago

10.1107/S1600577520007353

Impact of lossy compression of X-ray projections onto reconstructed tomographic slices
Cited by: 0
Author(s): Federica Marone, Jakob Vogel, Marco Stampanoni
Software Mentions: 1
Published: about 6 years ago

10.1007/978-3-319-35072-1_9

Applications of the BLEND Software to Crystallographic Data from Membrane Proteins
Cited by: 7
Author(s): Pierre Aller, Tao Geng, Gwyndaf Evans, James Foadi
Software Mentions: 1
Published: over 10 years ago

10.1186/s12864-015-1377-8

Genomic factors related to tissue tropism in Chlamydia pneumoniae infection
Cited by: 9
Author(s): Thomas Weinmaier, Jonathan Hoser, Sebastian Eck, Inga Kaufhold, Kensuke Shima, Tim M. Strom, Thomas Rattei, Jan Rupp
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0232781

Bacillus subtilis PB6 based probiotic supplementation plays a role in the recovery after the necrotic enteritis challenge
Cited by: 21
Author(s): Mashael R. Aljumaah, Manal M. Alkhulaifi, Alaeldein M. Abudabos, Riyadh S. Aljumaah, Asma N. Alsaleh, Dragana Stanley
Software Mentions: 1
Published: about 6 years ago

10.3390/molecules25194398

Anthocyanin Intake and Physical Activity: Associations with the Lipid Profile of a US Working Population
Cited by: 7
Author(s): María Soledad Hershey, Mercedes Sotos-Prieto, Miguel Ruiz‐Canela, Miguel Ángel Martínez‐González, Aedín Cassidy, Steven Moffatt, Stefanos N. Kales
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0070495

The Influence of Relatives on the Efficiency and Error Rate of Familial Searching
Cited by: 22
Author(s): Rori V. Rohlfs, Erin Murphy, Yun S. Song, Montgomery Slatkin
Software Mentions: 1
Published: about 13 years ago