10.1038/s41598-021-92504-5

Comparative transcriptomic and physiological analyses of weedy rice and cultivated rice to identify vital differentially expressed genes and pathways regulating the ABA response
Cited by: 4
Author(s): Hong Lang, Yuting He, Faliang Zeng, Fan Xu, Mingzhu Zhao, Dianrong Ma
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pone.0183142

Minimally-invasive glaucoma surgeries (MIGS) for open angle glaucoma: A systematic review and meta-analysis
Cited by: 286
Author(s): Carlo Lavia, Laura Dallorto, Milena Maule, Manuela Ceccarelli, Antonio Maria Fea
Software Mentions: 1
Published: almost 9 years ago

10.1038/sdata.2017.204

The impact of new transportation modes on population distribution in Jing-Jin-Ji region of China
Cited by: 25
Author(s): Lizhe Wang, Lajiao Chen
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pgen.1005956

Deactivation of the GATA Transcription Factor ELT-2 Is a Major Driver of Normal Aging in C. elegans
Cited by: 43
Author(s): Frederick G. Mann, Eric L. Van Nostrand, Ari E. Friedland, Xiao Liu, Stuart K. Kim
Software Mentions: 1
Published: over 10 years ago

10.1186/s12711-016-0262-5

Semi-supervised learning for genomic prediction of novel traits with small reference populations: an application to residual feed intake in dairy cattle
Cited by: 19
Author(s): Chen Yao, Xiaojin Zhu, K.A. Weigel
Software Mentions: 1
Published: almost 10 years ago

10.3390/molecules24081629

Encoded Library Technologies as Integrated Lead Finding Platforms for Drug Discovery
Cited by: 67
Author(s): Johannes Ottl, Lukas Leder, Jonas V. Schaefer, Christoph E. Dumelin
Software Mentions: 1
Published: over 7 years ago

10.3389/fonc.2020.557643

New Drug Repositioning Candidates for T-ALL Identified Via Human/Murine Gene Signature Comparison
Cited by: 4
Author(s): Raphaël Bonnet, Marielle Nebout, Carine Brousse, Frédéric Reinier, Véronique Imbert, Pierre Röhrlich, Jean‐François Peyron
Software Mentions: 1
Published: almost 6 years ago

10.3390/jof7040295

Genome-Wide Identification and Analysis of Nilaparvata lugens microRNAs during Challenge with the Entomopathogenic Fungus Metarhizium anisopliae
Cited by: 3
Author(s): Jiaqin Xie, Yifan Peng, Yuxian Xia
Software Mentions: 1
Published: over 5 years ago

10.1186/s12933-021-01270-1

Sacubitril/valsartan inhibits obesity-associated diastolic dysfunction through suppression of ventricular-vascular stiffness
Cited by: 15
Author(s): Annayya R. Aroor, Srinivas Mummidi, Juan Carlos López-Alvarenga, Nitin A. Das, Javad Habibi, Guanghong Jia, Guido Lastra, Bysani Chandrasekar, Vincent G. DeMarco
Software Mentions: 1
Published: over 5 years ago

10.1038/s41398-021-01526-0

The continuity of effect of schizophrenia polygenic risk score and patterns of cannabis use on transdiagnostic symptom dimensions at first-episode psychosis: findings from the EU-GEI study
Cited by: 8
Author(s): Diego Quattrone, Ulrich Reininghaus, Alex Richards, Giada Tripoli, Laura Ferraro, Andrea Quattrone, Paolo Marino, Victoria Rodríguez, Edoardo Spinazzola, Charlotte Gayer‐Anderson, Hannah E Jongsma, Peter B. Jones, Caterina La Cascia, Daniele La Barbera, Ilaria Tarricone, Elena Bonora, Sarah Tosato, Antonio Lasalvia, Andreı̈ Szöke, Celso Arango, Miquel Bernardo, Julio Bobes, Cristina Marta Del Ben, Paulo Rossi Menezes, Pierre‐Michel Llorca, José Luís Santos, Julio Sanjuán, Manuel Arrojo, Andrea Tortelli, Eva Velthorst, Steven Berendsen, Lieuwe de Haan, Bart P. F. Rutten, Michael T. Lynskey, Tom P. Freeman, James Kirkbride, Pak C. Sham, Michael O’Donovan, Alastair G. Cardno, Evangelos Vassos, Jim van Os, Craig Morgan, Robin M. Murray, Cathryn M. Lewis, Marta Di Forti
Software Mentions: 1
Published: about 5 years ago

10.1155/2014/764218

Improving Rutting Resistance of Pavement Structures Using Geosynthetics: An Overview
Cited by: 16
Author(s): Sina Mirzapour Mounes, Mohamed Rehan Karim, Ali Khodaii, Mohammad Hadi Almasi
Software Mentions: 1
Published: over 12 years ago

10.1186/s12909-021-02619-6

Survey-based experiential learning as a new approach to strengthening non-technical skills in LMIC health care settings
Cited by: 0
Author(s): Ruhija Hodza-Beganovic, Peter Berggren, Karin Hugelius, Samuel Edelbring
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2019.01517

miRNA-Gene Regulatory Network in Gnotobiotic Mice Stimulated by Dysbiotic Gut Microbiota Transplanted From a Genetically Obese Child
Cited by: 8
Author(s): Liman Deng, Ruirui Wang, Hui Li, Chenhong Zhang, Liping Zhao, Menghui Zhang
Software Mentions: 1
Published: about 7 years ago

10.3390/ht7020009

Recent Advances in Targeted and Untargeted Metabolomics by NMR and MS/NMR Methods
Cited by: 108
Author(s): Kerem Bingol
Software Mentions: 1
Published: over 8 years ago

10.1186/s12909-017-1029-6

What do Japanese residents learn from treating dying patients? The implications for training in end-of-life care
Cited by: 12
Author(s): Kozo Arai, Takuya Saiki, Rintaro Imafuku, Chihiro Kawakami, Kazuhiko Fujisaki, Yasuyuki Suzuki
Software Mentions: 1
Published: almost 9 years ago

10.1186/s12874-018-0559-x

Appropriate statistical methods for analysing partially nested randomised controlled trials with continuous outcomes: a simulation study
Cited by: 28
Author(s): Jane Candlish, M. Dawn Teare, Munyaradzi Dimairo, Laura Flight, Laura Mandefield, Stephen J. Walters
Software Mentions: 1
Published: almost 8 years ago

10.3390/s21103438

Improved In-Flight Estimation of Inertial Biases through CDGNSS/Vision Based Cooperative Navigation
Cited by: 4
Author(s): Flavia Causa, Giancarmine Fasano
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2021.710845

The Molecular Mechanism of Hemocyte Immune Response in Marsupenaeus japonicus Infected With Decapod Iridescent Virus 1
Cited by: 15
Author(s): Zihao He, Jichen Zhao, Xieyan Chen, Minze Liao, Yuan Xue, Jianing Zhou, Haozhen Chen, Guoliang Chen, Shuang Zhang, Chengbo Sun
Software Mentions: 1
Published: almost 5 years ago

10.29024/aogh.16

Clinical Supervision and Support: Exploring Pre-registration Nursing Students’ Clinical Practice in Malawi
Cited by: 11
Author(s): Nanzen Caroline Chinguwo Kaphagawani, Ushotanefe Useh
Software Mentions: 1
Published: over 8 years ago

10.1017/S0950268816000017

Exposure to viral and bacterial pathogens among Soay sheep (<i>Ovis aries</i>) of the St Kilda archipelago
Cited by: 7
Author(s): Andrea L. Graham, Daniel H. Nussey, James O. Lloyd‐Smith, David Longbottom, Madeleine Maley, Josephine M. Pemberton, Jill G. Pilkington, Katherine C. Prager, Lorraine P. Smith, Kathryn Watt, Kenneth Wilson, Tom N. McNeilly, Franz Brülisauer
Software Mentions: 1
Published: over 10 years ago

10.1038/s41598-021-92938-x

Unraveling regulatory divergence, heterotic malleability, and allelic imbalance switching in rice due to drought stress
Cited by: 3
Author(s): Nelzo C. Ereful, Antonio C. Laurena, Liyu Liu, Shu‐Fang Kao, Eric Tsai, Andy Greenland, W. Powell, Ian Mackay, Hei Leung
Software Mentions: 1
Published: about 5 years ago

10.3390/s19194087

Geophonino-W: A Wireless Multichannel Seismic Noise Recorder System for Array Measurements
Cited by: 6
Author(s): Juan Luis Soler-Llorens, Juan José Galiana-Merino, J. Giner-Caturla, S. Rosa-Cintas, Boualem Youcef Nassim-Benabdeloued
Software Mentions: 1
Published: almost 7 years ago

10.3389/fphys.2021.628264

Identification of Plasmatic Biomarkers of Foie Gras Qualities in Duck by Metabolomics
Cited by: 5
Author(s): Zohre Mozduri, Nathalie Marty-Gasset, Bara Lo, Ali Masoudi, Mireille Morisson, Cécile Canlet, Julien Arroyo, Agnès Bonnet, Cécile Bonnefont
Software Mentions: 1
Published: over 5 years ago

10.1098/rsos.190256

Repeatable glucocorticoid expression is associated with behavioural syndromes in males but not females in a wild primate
Cited by: 9
Author(s): Patrick J. Tkaczynski, Caroline Ross, Julia Lehmann, Mohamed Mouna, Bonaventura Majolo, Ann MacLarnon
Software Mentions: 1
Published: almost 7 years ago

10.1038/s41598-021-93107-w

A kinome-centered CRISPR-Cas9 screen identifies activated BRAF to modulate enzalutamide resistance with potential therapeutic implications in BRAF-mutated prostate cancer
Cited by: 6
Author(s): Sander Palit, Jeroen van Dorp, Daniël J. Vis, Cor Lieftink, Simon Linder, Roderick L. Beijersbergen, Andries M. Bergman, Wilbert Zwart, Michiel S. van der Heijden
Software Mentions: 1
Published: about 5 years ago

10.7717/peerj.1043

Life as a bachelor: quantifying the success of an alternative reproductive tactic in male blue monkeys
Cited by: 10
Author(s): Su-Jen Roberts, Marina Cords
Software Mentions: 1
Published: about 11 years ago

10.1186/s12874-016-0241-0

www.common-metrics.org: a web application to estimate scores from different patient-reported outcome measures on a common scale
Cited by: 17
Author(s): Felix Fischer, Matthias Rose
Software Mentions: 1
Published: almost 10 years ago

10.3390/s140815434

Estimation of Spatial-Temporal Gait Parameters Using a Low-Cost Ultrasonic Motion Analysis System
Cited by: 22
Author(s): Yongbin Qi, Christina Soh, E. Gunawan, Kay Soon Low, Rijil Thomas
Software Mentions: 1
Published: about 12 years ago

10.3390/s21124118

Integration of Remote Sensing and Mexican Water Quality Monitoring System Using an Extreme Learning Machine
Cited by: 16
Author(s): Leonardo F. Arias-Rodriguez, Zheng Duan, José de Jesús Díaz-Torres, Mónica Basilio Hazas, Jingshui Huang, Bapitha Udhaya Kumar, Ye Tuo, Markus Disse
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.695572

Functional Characterization of the Cell Division Gene Cluster of the Wall-less Bacterium Mycoplasma genitalium
Cited by: 11
Author(s): Carlos Martínez-Torró, Sergi Torres-Puig, Marina Marcos-Silva, Marta Huguet-Ramón, Carmen Muñoz-Navarro, María Lluch‐Senar, Luís Serrano, Enrique Querol, Jaume Piñol, Óscar Q. Pich
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0222163

Cryptic diversity of limestone karst inhabiting land snails (Cyclophorus spp.) in northern Vietnam, their evolutionary history and the description of four new species
Cited by: 8
Author(s): Katharina C. M. von Oheimb, Parm Viktor von Oheimb, Toshio Hirano, Tu Van Do, Jonathan D. Ablett, Hào Văn Lương, Sang Van Pham, Fred Naggs
Software Mentions: 1
Published: almost 7 years ago

10.3389/fgene.2021.633812

Immunogenomic Profiling Demonstrate AC003092.1 as an Immune-Related eRNA in Glioblastoma Multiforme
Cited by: 11
Author(s): Xiaoyu Guo, Sheng Zhong, Zhenning Wang, Tian Xie, Hao Duan, Jiayu Zhang, Guanhua Zhang, Lingming Liang, Run Cui, Hongrong Hu, Jie Lü, Yi Hui Wu, Jiajun Dong, Zhenqiang He, Yonggao Mou
Software Mentions: 1
Published: over 5 years ago

10.15252/embr.201949858

βH‐spectrin is required for ratcheting apical pulsatile constrictions during tissue invagination
Cited by: 13
Author(s): Daniel Krueger, Cristina Pallares Cartes, Thijs Makaske, Stefano De Renzis
Software Mentions: 1
Published: about 6 years ago

10.1021/acs.analchem.0c04233

Improved Automated Quantification Algorithm (AQuA) and Its Application to NMR-Based Metabolomics of EDTA-Containing Plasma
Cited by: 4
Author(s): Hanna E. Röhnisch, Jan W. Eriksson, Lan V. Tran, Ernst W. Müllner, Corine Sandström, Ali A. Moazzami
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-93364-9

Transcriptomic analysis of the black tiger shrimp (Penaeus monodon) reveals insights into immune development in their early life stages
Cited by: 5
Author(s): Pacharaporn Angthong, Tanaporn Uengwetwanit, Sopacha Arayamethakorn, Wanilada Rungrassamee
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.548737

Cryptosporidium parvum Infection Depletes Butyrate Producer Bacteria in Goat Kid Microbiome
Cited by: 15
Author(s): Mohamed Mammeri, Dasiel Obregón, Aurélie Chevillot, Bruno Polack, Christine Julien, Thomas V. Pollet, Alejandro Cabezas-Cruz, Karim Adjou
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0209060

A computational solution to improve biomarker reproducibility during long-term projects
Cited by: 7
Author(s): Feng Feng, Morgan Thompson, Beena Thomas, Elizabeth Duffy, Jiyoun Kim, Shinichiro Kurosawa, Joseph Y. Tashjian, Yibing Wei, Chris Andry
Software Mentions: 1
Published: over 7 years ago

10.3389/fmolb.2020.00055

The Small-Molecule Flunarizine in Spinal Muscular Atrophy Patient Fibroblasts Impacts on the Gemin Components of the SMN Complex and TDP43, an RNA-Binding Protein Relevant to Motor Neuron Diseases
Cited by: 3
Author(s): Delphine Sapaly, Perrine Delers, Jennifer Coridon, Badih Salman, Franck Letourneur, Florent Dumont, Suzie Lefebvre
Software Mentions: 1
Published: over 6 years ago

10.1186/s12014-017-9158-9

Clinical validation of a blood-based classifier for diagnostic evaluation of asymptomatic individuals with pulmonary nodules
Cited by: 2
Author(s): Charles E. Birse, Jennifer L. Tomic, Harvey I. Pass, William N. Rom, Robert Lagier
Software Mentions: 1
Published: about 9 years ago

10.3390/ani10040675

Quantifying the Geometric Shell Shape between Populations of True Limpets Lottia Mesoleuca (Mollusca: Lottidae) in Colombia
Cited by: 5
Author(s): Ana María Echeverry, Edgardo Londoño‐Cruz, Hugo A. Benítez
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0040916

Teamwork: Improved eQTL Mapping Using Combinations of Machine Learning Methods
Cited by: 10
Author(s): Marit Ackermann, Mathieu Clément-Ziza, Jacob J. Michaelson, Andreas Beyer
Software Mentions: 1
Published: about 14 years ago

10.3390/cells7120249

MicroRNAs as Diagnostic and Prognostic Biomarkers in Ischemic Stroke—A Comprehensive Review and Bioinformatic Analysis
Cited by: 110
Author(s): Ceren Eyileten, Zofia Wicik, Salvatore De Rosa, Dagmara Mirowska‐Guzel, Ciro Indolfi, Iwona Jastrzebska‐Kurkowska, Anna Członkowska, Marek Postuła
Software Mentions: 1
Published: over 7 years ago

10.3390/cancers13061230

Single-Cell Deconvolution of Head and Neck Squamous Cell Carcinoma
Cited by: 26
Author(s): Zongtai Qi, Yating Liu, Michael Mints, Riley Mullins, Reilly A. Sample, Travis Law, Thomas F. Barrett, Angela L. Mazul, Ryan Jackson, Stephen Y. Kang, Patrik Pipkorn, Anuraag S. Parikh, Joseph D. Dougherty, Sidharth V. Puram
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0121441

Extracellular Superoxide Dismutase Regulates the Expression of Small GTPase Regulatory Proteins GEFs, GAPs, and GDI
Cited by: 25
Author(s): Mikko O. Laukkanen, Francesca Cammarota, Tiziana Esposito, Marco Salvatore, Maria Domenica Castellone
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0177004

Gene expression of behaviorally relevant genes in the cerebral hemisphere changes after selection for tameness in Red Junglefowl
Cited by: 9
Author(s): Johan Bélteky, Beatrix Agnvall, Per Jensen
Software Mentions: 1
Published: over 9 years ago

10.3389/fmolb.2021.618869

miR-7b-3p Exerts a Dual Role After Spinal Cord Injury, by Supporting Plasticity and Neuroprotection at Cortical Level
Cited by: 8
Author(s): Matilde Ghibaudi, Marina Boido, Darrell Green, Elena Signorino, Gaia Berto, Soraya Pourshayesteh, Archana Archana, Ferdinando Di Cunto, Tamás Dalmay, Alessandro Vercelli
Software Mentions: 1
Published: over 5 years ago

10.1534/g3.119.400740

Network-Based Functional Prediction Augments Genetic Association To Predict Candidate Genes for Histamine Hypersensitivity in Mice
Cited by: 9
Author(s): Anna L. Tyler, Abbas Raza, Dimitry N. Krementsov, Laure K. Case, Rui Huang, Z. Runlin, Elizabeth P. Blankenhorn, Cory Teuscher, James Mahoney
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0115835

Focal Chromosomal Copy Number Aberrations Identify CMTM8 and GPR177 as New Candidate Driver Genes in Osteosarcoma
Cited by: 31
Author(s): Joeri Both, Oscar Krijgsman, Johannes Bras, Gerard R. Schaap, Frank Baas, Bauke Ylstra, Theo J.M. Hulsebos
Software Mentions: 1
Published: over 11 years ago

10.18632/oncotarget.17926

Increased transcriptional and metabolic capacity for lipid metabolism in the peripheral zone of the prostate may underpin its increased susceptibility to cancer
Cited by: 11
Author(s): Omar Al Kadhi, Μαρία Τράκα, Antonietta Melchini, Perla Troncoso‐Rey, Wiktor Jurkowski, Marianne Defernez, Purnima Pachori, Robert Mills, Richard Y. Ball, Richard Mithen
Software Mentions: 1
Published: over 9 years ago

10.1155/2021/8849568

Synthesis and Biological Screening of New 4-Hydroxycoumarin Derivatives and Their Palladium(II) Complexes
Cited by: 10
Author(s): Edina H. Avdović, Isidora Petrović, Milena Stevanović, Luciano Saso, Jasmina M. Dimitrić Marković, Nenad Filipović, Miroslav Živić, Tijana N. Cvetić Antić, Milan Žižić, Nataša Todorović, Milena Vukić, Srećko R. Trifunović, Zoran Marković
Software Mentions: 1
Published: over 5 years ago

10.1002/nop2.649

Collegial surface acting emotional labour, burnout and intention to leave in novice and pre‐retirement nurses in the United Kingdom: A cross‐sectional study
Cited by: 20
Author(s): Catherine Theodosius, Christina Koulouglioti, Paula Kersten, Claire Rosten
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12862-018-1335-6

Changes in ontogenetic patterns facilitate diversification in skull shape of Australian agamid lizards
Cited by: 17
Author(s): Jaimi A. Gray, Emma Sherratt, Mark N. Hutchinson, Marc E. H. Jones
Software Mentions: 1
Published: over 7 years ago

10.2174/1874104500701010004

Synthesis of Novel 3-Aryl--Methyl-1,2,5,6-Tetrahydropyridine Derivatives by Suzuki coupling: As Acetyl Cholinesterase Inhibitors
Cited by: 2
Author(s): S. Prasad, Y.C. Sunil Kumar, C. S. Ananda Kumar, C. T. Sadashiva, K. Vinaya, Kanchugarakoppal S. Rangappa
Software Mentions: 1
Published: almost 19 years ago

10.18632/oncotarget.11215

Frequency of expression and generation of T-cell responses against antigens on multiple myeloma cells in patients included in the GMMG-MM5 trial
Cited by: 5
Author(s): Michael Schmitt, Angela Hückelhoven, Michael Hundemer, Anita Schmitt, Susanne Lipp, Martina Emde, Hans Salwender, Mathias Hänel, Katja Weisel, Uta Bertsch, Jan Dürig, Anthony D. Ho, Igor Wolfgang Blau, Hartmut Goldschmidt, Anja Seckinger, Dirk Hose
Software Mentions: 1
Published: about 10 years ago

10.7554/eLife.16851

Detection of transient synchrony across oscillating receptors by the central electrosensory system of mormyrid fish
Cited by: 11
Author(s): Alejandro Vélez, Bruce A. Carlson
Software Mentions: 1
Published: about 10 years ago

10.1186/s13073-018-0545-2

Integrated time course omics analysis distinguishes immediate therapeutic response from acquired resistance
Cited by: 24
Author(s): Genevieve Stein-O’Brien, Luciane T. Kagohara, Sijia Li, Manjusha Thakar, Ruchira S. Ranaweera, Hiroyuki Ozawa, Haixia Cheng, Michael Considine, Sandra Schmitz, Alexander V. Favorov, Ludmila Danilova, Joseph A. Califano, Evgeny Izumchenko, Daria A. Gaykalova, Christine H. Chung, Elana J. Fertig
Software Mentions: 1
Published: over 8 years ago

10.3389/fcell.2020.00698

Extracellular Vesicles Released by Tumor Endothelial Cells Spread Immunosuppressive and Transforming Signals Through Various Recipient Cells
Cited by: 17
Author(s): Tatiana Lopatina, Enrica Favaro, Ludmila Danilova, Elana J. Fertig, Alexander V. Favorov, Luciane T. Kagohara, Tiziana Martone, Benedetta Bussolati, Renato Romagnoli, Roberto Albera, Giancarlo Pecorari, Maria Felice Brizzi, Giovanni Camussi, Daria A. Gaykalova
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-92633-x

Seasonal influence on the bathymetric distribution of an endangered fish within a marine protected area
Cited by: 6
Author(s): A Brazo, Raquel Marques, Mark Zimmermann, Eneko Aspillaga, Bernat Hereu, Gilles Saragoni, Alexandre Mercière, Romain Crec’hriou, Manon Mercader, Marion Verdoit‐Jarraya, Frederic Cadene, Philippe Lenfant
Software Mentions: 1
Published: about 5 years ago

10.1016/j.tig.2018.07.003

Enter the Matrix: Factorization Uncovers Knowledge from Omics
Cited by: 177
Author(s): Genevieve Stein-O’Brien, Raman Arora, Aedín C. Culhane, Alexander V. Favorov, Lana X. Garmire, Casey S. Greene, Loyal A. Goff, Yifeng Li, Aloune Ngom, Michael F. Ochs, Yanxun Xu, Elana J. Fertig
Software Mentions: 1
Published: almost 8 years ago

10.1186/1741-7015-10-43

A new analysis approach of epidermal growth factor receptor pathway activation patterns provides insights into cetuximab resistance mechanisms in head and neck cancer
Cited by: 1
Author(s): Silvia von der Heyde, Tim Beißbarth
Software Mentions: 1
Published: over 14 years ago

10.18632/oncotarget.12075

CoGAPS matrix factorization algorithm identifies transcriptional changes in AP-2alpha target genes in feedback from therapeutic inhibition of the EGFR network
Cited by: 18
Author(s): Elana J. Fertig, Hiroyuki Ozawa, Manjusha Thakar, Jason D. Howard, Luciane T. Kagohara, Gabriel Krigsfeld, Ruchira S. Ranaweera, Robert M. Hughes, Jimena Pérez, Siân Jones, Alexander V. Favorov, Jacob Carey, Genevieve Stein-O’Brien, Daria A. Gaykalova, Michael F. Ochs, Christine H. Chung
Software Mentions: 1
Published: almost 10 years ago

10.1186/s12859-020-03796-9

CoGAPS 3: Bayesian non-negative matrix factorization for single-cell analysis with asynchronous updates and sparse data structures
Cited by: 20
Author(s): Thomas D. Sherman, Tiger Gao, Elana J. Fertig
Software Mentions: 1
Published: almost 6 years ago

10.3390/toxins9020062

Variable Cyanobacterial Toxin and Metabolite Profiles across Six Eutrophic Lakes of Differing Physiochemical Characteristics
Cited by: 68
Author(s): Lucas J. Beversdorf, Chelsea A. Weirich, Sarah L. Bartlett, Todd R. Miller
Software Mentions: 1
Published: over 9 years ago

10.7717/peerj.11823

Transcriptional landscape in rat intestines under hypobaric hypoxia
Cited by: 6
Author(s): Liuyang Tian, Zhilong Jia, Zhenguo Xu, Jianxin Shi, Xiaojing Zhao, Kunlun He
Software Mentions: 1
Published: about 5 years ago

10.1186/scrt192

Profiling of transcriptional and epigenetic changes during directed endothelial differentiation of human embryonic stem cells identifies FOXA2 as a marker of early mesoderm commitment
Cited by: 13
Author(s): Lynsey Howard, Ruth M. Mackenzie, Nikolay A. Pchelintsev, Tony McBryan, John McClure, Martin W. McBride, Nicole M. Kane, Peter D. Adams, Graeme Milligan, Andrew H. Baker
Software Mentions: 1
Published: over 13 years ago

10.1038/s41398-019-0567-6

Dynamical properties of elemental metabolism distinguish attention deficit hyperactivity disorder from autism spectrum disorder
Cited by: 17
Author(s): Christine Austin, Paul Curtin, Austen Curtin, Chris Gennings, Manish Arora, Kristiina Tammimies, Johan Isaksson, Charlotte Willfors, Sven Bölte
Software Mentions: 1
Published: almost 7 years ago

10.3390/nu12030812

Development and Validation of Surveys to Estimate Food Additive Intake
Cited by: 2
Author(s): Gina L. Trakman, Weitao Lin, Amy Wilson-O’Brien, Annalise Stanley, Amy L. Hamilton, Whitney Tang, Leo Or, Jessica Y. L. Ching, Mark Morrison, Jun Yu, Siew C. Ng, Michael A. Kamm
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0198139

Elevated Nrf-2 responses are insufficient to mitigate protein carbonylation in hepatospecific PTEN deletion mice
Cited by: 12
Author(s): Dennis R. Petersen, Laura Saba, Volkan I. Sayin, Thales Papagiannakopoulos, Edward E. Schmidt, Gary F. Merrill, David J. Orlicky, Colin T. Shearn
Software Mentions: 1
Published: about 8 years ago

10.1038/s41598-021-84638-3

Comparative transcriptome and metabolome profiling reveal molecular mechanisms underlying OsDRAP1-mediated salt tolerance in rice
Cited by: 22
Author(s): Yinxiao Wang, Liying Huang, Fengping Du, Juan Wang, Xiuqin Zhao, Zhikang Li, Wensheng Wang, Jianlong Xu, Binying Fu
Software Mentions: 1
Published: over 5 years ago

10.3390/ijerph18158030

In Situ Neutral System Synthesis, Spectroscopic, and Biological Interpretations of Magnesium(II), Calcium(II), Chromium(III), Zinc(II), Copper(II) and Selenium(IV) Sitagliptin Complexes
Cited by: 8
Author(s): Samy M. El‐Megharbel, Moamen S. Refat, Fawziah A. Al-Salmi, Reham Z. Hamza
Software Mentions: 1
Published: about 5 years ago

10.2196/jmir.6678

Behavioral Indicators on a Mobile Sensing Platform Predict Clinically Validated Psychiatric Symptoms of Mood and Anxiety Disorders
Cited by: 98
Author(s): Skyler Place, Danielle Blanch‐Hartigan, Channah Rubin, Cristina Gorrostieta, Caroline Mead, John M. Kane, Brian P. Marx, Joshua Feast, Thilo Deckersbach, Alex Pentland, Andrew A. Nierenberg, A. Azarbayejani
Software Mentions: 1
Published: over 9 years ago

10.3390/pharmaceutics6030467

Temperature Dependence of the Complexation Mechanism of Celecoxib and Hydroxyl-β-cyclodextrin in Aqueous Solution
Cited by: 9
Author(s): Po-Chiang Chiang, Yue Shi, Yong Cui
Software Mentions: 1
Published: about 12 years ago

10.3390/pharmaceutics12060500

Development and Evaluation of Matrices Composed of β-cyclodextrin and Biodegradable Polyesters in the Controlled Delivery of Pindolol
Cited by: 6
Author(s): Agnieszka Lis-Cieplak, Filip Charuk, Marcin Sobczak, Anna Zgadzaj, Agata Drobniewska, Łukasz Szeleszczuk, Ewa Olędzka
Software Mentions: 1
Published: about 6 years ago

10.3390/pharmaceutics10010035

Orally Disintegrating Tablets Containing Melt Extruded Amorphous Solid Dispersion of Tacrolimus for Dissolution Enhancement
Cited by: 19
Author(s): P. N. Poovizhi, Parijat Kanaujia, Yin Yani, Wai Kiong Ng, Reginald B. H. Tan
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms8040512

Symbioflor2® Escherichia coli Genotypes Enhance Ileal and Colonic Gene Expression Associated with Mucosal Defense in Gnotobiotic Mice
Cited by: 2
Author(s): Unai Escribano-Vázquez, Claudia Beimfohr, Déborah Bellet, Muriel Thomas, Kurt Zimmermann, Philippe Langella, Claire Cherbuy
Software Mentions: 1
Published: over 6 years ago

10.18632/oncotarget.20284

Downregulation of microRNA-31 inhibits proliferation and induces apoptosis by targeting <i>HIF1AN</i> in human keloid
Cited by: 21
Author(s): Juan Zhang, Dan Xu, Na Li, Yan Li, Yongjing He, Xingbo Hu, Lechun Lyu, Li He
Software Mentions: 1
Published: about 9 years ago

10.7554/eLife.31657

Highly multiplexed immunofluorescence imaging of human tissues and tumors using t-CyCIF and conventional optical microscopes
Cited by: 418
Author(s): Jia-Ren Lin, Benjamin Izar, Shu Wang, Clarence Yapp, Shaolin Mei, Parin Shah, Sandro Santagata, Peter K. Sorger
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pbio.2003080

Witnessing extinction in real time
Cited by: 4
Author(s): Karen R. Lips
Software Mentions: 1
Published: over 8 years ago

10.3390/microorganisms9071507

2019 Survey of Antimicrobial Drug Use and Stewardship Practices in Adult Cows on California Dairies: Post Senate Bill 27
Cited by: 8
Author(s): Essam M. Abdelfattah, Pius S. Ekong, Emmanuel Okello, D. E. Williams, Betsy M. Karle, Joan D Rowe, Edith S. Marshall, Terry W. Lehenbauer, Sharif S. Aly
Software Mentions: 1
Published: about 5 years ago

10.1038/s41598-021-81425-y

Population genetics and forensic utility of 23 autosomal PowerPlex Fusion 6C STR loci in the Kuwaiti population
Cited by: 5
Author(s): Mahdi Haidar, Fatimah A. Abbas, Hussain Alsaleh, Penelope R. Haddrill
Software Mentions: 1
Published: over 5 years ago

10.1002/iub.2195

Systematic integration of GATA transcription factors and epigenomes via IDEAS paints the regulatory landscape of hematopoietic cells
Cited by: 6
Author(s): Ross C. Hardison, Yu Zhang, Cheryl A. Keller, Guanjue Xiang, Elisabeth F. Heuston, Lin An, Jens Lichtenberg, Belinda Giardine, David M. Bodine, Shaun Mahony, Qunhua Li, Feng Yue, Mitchell J. Weiss, Gerd A. Blobel, James Taylor, Jim R. Hughes, Douglas R. Higgs, Berthold Göttgens
Software Mentions: 1
Published: over 6 years ago

10.1186/s12862-017-0975-2

Morphological modularity in the vertebral column of Felidae (Mammalia, Carnivora)
Cited by: 41
Author(s): Marcela Randau, Anjali Goswami
Software Mentions: 1
Published: about 9 years ago

10.1186/s40246-018-0167-1

Whole-exome sequencing identifies novel pathogenic mutations and putative phenotype-influencing variants in Polish limb-girdle muscular dystrophy patients
Cited by: 37
Author(s): Jakub Piotr Fichna, Anna Macias, Marcin Piechota, Michał Korostyński, Anna Potulska‐Chromik, Maria Jolanta Redowicz, Cezary Żekanowski
Software Mentions: 1
Published: about 8 years ago

10.3389/fnmol.2019.00284

Transcriptional Profiling of Non-injured Nociceptors After Spinal Cord Injury Reveals Diverse Molecular Changes
Cited by: 10
Author(s): J. Yasko, Isaac L. Moss, Richard E. Mains
Software Mentions: 1
Published: over 6 years ago

10.1186/s13229-018-0229-1

Clustering the autisms using glutamate synapse protein interaction networks from cortical and hippocampal tissue of seven mouse models
Cited by: 18
Author(s): Emily Brown, Jonathan D. Lautz, Tessa R. Davis, Edward P. Gniffke, Alison VanSchoiack, Steven C. Neier, Noah Tashbook, Chiara Nicolini, Margaret Fahnestock, Adam G. Schrum, Stephen Smith
Software Mentions: 1
Published: almost 8 years ago

10.3389/fnmol.2020.602638

Krüppel-Like Factors 9 and 13 Block Axon Growth by Transcriptional Repression of Key Components of the cAMP Signaling Pathway
Cited by: 12
Author(s): José Ávila-Mendoza, Arasakumar Subramani, Robert J. Denver
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pgen.1005490

Protein Composition of Infectious Spores Reveals Novel Sexual Development and Germination Factors in Cryptococcus
Cited by: 23
Author(s): Mu-Shun Huang, Alexander S. Hebert, Joshua J. Coon, Christina M. Hull
Software Mentions: 1
Published: almost 11 years ago

10.1186/s12862-016-0782-1

Getting a head in hard soils: Convergent skull evolution and divergent allometric patterns explain shape variation in a highly diverse genus of pocket gophers (Thomomys)
Cited by: 36
Author(s): Ariel E. Marcy, Elizabeth A. Hadly, Emma Sherratt, Kathleen Garland, Vera Weisbecker
Software Mentions: 1
Published: almost 10 years ago

10.3390/ijerph18126279

Validation of the Emotional Literacy Program in Croatian Elementary Schools
Cited by: 0
Author(s): Tamara Mohorić, Vladimir Takšić, Ana Ćosić Pilepić
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pgen.1002952

Two Distinct Repressive Mechanisms for Histone 3 Lysine 4 Methylation through Promoting 3′-End Antisense Transcription
Cited by: 118
Author(s): Thanasis Margaritis, Vincent Oréal, Nathalie Brabers, Laetitia Maestroni, Adeline Vitaliano-Prunier, Joris J. Benschop, Sander van Hooff, Dik van Leenen, Catherine Dargemont, Vincent Géli, Frank C. P. Holstege
Software Mentions: 1
Published: almost 14 years ago

10.3390/molecules25102400

Composition, Seasonal Variation, and Biological Activities of Lantana camara Essential Oils from Côte d’Ivoire
Cited by: 18
Author(s): Fatimata Nea, Didjour Albert Kambiré, Manon Genva, Evelyne Amenan Tanoh, Esse Leon Wognin, Henri Martin, Yves Brostaux, Félix Tomi, Georges Lognay, Zanahi Félix Tonzibo, Marie‐Laure Fauconnier
Software Mentions: 1
Published: over 6 years ago

10.1089/cmb.2019.0340

Modeling Multiplexed Images with <i>Spatial-LDA</i> Reveals Novel Tissue Microenvironments
Cited by: 32
Author(s): Zhenghao Chen, Ilya Soifer, Hugo G. Hilton, Leeat Keren, Vladimir Jojic
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pgen.1002109

A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in Caenorhabditis elegans
Cited by: 46
Author(s): Richard J. Poole, Enkelejda Bashllari, Luisa Cochella, Eileen B. Flowers, Oliver Hobert
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pmed.1003619

Gender-equitable caregiver attitudes and education and safety of adolescent girls in South Kivu, DRC: A secondary analysis from a randomized controlled trial
Cited by: 3
Author(s): Ilana Seff, Kathryn Falb, Gary Yu, Debbie Landis, Lindsay Stark
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pmed.1003038

Safety and immune responses after a 12-month booster in healthy HIV-uninfected adults in HVTN 100 in South Africa: A randomized double-blind placebo-controlled trial of ALVAC-HIV (vCP2438) and bivalent subtype C gp120/MF59 vaccines
Cited by: 24
Author(s): Fatima Laher, Zoe Moodie, Kristen W. Cohen, Nicole Grunenberg, Linda‐Gail Bekker, Mary Allen, Nicole Frahm, Nicole L. Yates, Lynn Morris, Mookho Malahleha, Kathryn Mngadi, Brodie Daniels, Craig Innes, Kevin O. Saunders, Shannon Grant, Chenchen Yu, Peter B. Gilbert, Sanjay Phogat, Carlos A. DiazGranados, Marguerite Koutsoukos, Olivier Van Der Meeren, Carter Bentley, Nonhlanhla N. Mkhize, Michael Pensiero, Vishu Mehra, James G. Kublin, Lawrence Corey, David C. Montefiori, Glenda Gray, M. Juliana McElrath, Georgia D. Tomaras
Software Mentions: 1
Published: over 6 years ago

10.3390/molecules25225485

Comprehensive Review on Application of FTIR Spectroscopy Coupled with Chemometrics for Authentication Analysis of Fats and Oils in the Food Products
Cited by: 33
Author(s): Abdul Rohman, Mohd. Al'Ikhsan Ghazali, Anjar Windarsih, Irnawati Irnawati, Sugeng Riyanto, Farahwahida Mohd Yusof, Shuhaimi Mustafa
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0013402

Of Bits and Bugs — On the Use of Bioinformatics and a Bacterial Crystal Structure to Solve a Eukaryotic Repeat-Protein Structure
Cited by: 20
Author(s): Almut Graebsch, Stéphane Roche, Dirk Kostrewa, Johannes Söding, Dierk Niessing
Software Mentions: 1
Published: almost 16 years ago

10.1002/mnfr.201900189

Application of Volatile Organic Compound Analysis in a Nutritional Intervention Study: Differential Responses during Five Hours Following Consumption of a High‐ and a Low‐Fat Dairy Drink
Cited by: 10
Author(s): Jeske H. J. Hageman, Arie G. Nieuwenhuizen, Saskia M. van Ruth, Jos A. Hageman, Jaap Keijer
Software Mentions: 1
Published: about 7 years ago

10.1002/mds.26992

metabolic profiling of Parkinson's disease and mild cognitive impairment
Cited by: 52
Author(s): Florence Burté, David Houghton, Hannah Lowes, Angela Pyle, Sarah Nesbitt, Alison J. Yarnall, Patrick Yu‐Wai‐Man, David J. Burn, Mauro Santibanez‐Koref, Gavin Hudson
Software Mentions: 1
Published: over 9 years ago

10.3390/jcm9072119

The Use of Demoralization Scale in Italian Kidney Transplant Recipients
Cited by: 10
Author(s): Yuri Battaglia, Luigi Zerbinati, Giulia Piazza, Elena Martino, Sara Massarenti, Michele Provenzano, Pasquale Esposito, Michele Andreucci, Alda Storari, Luigi Grassi
Software Mentions: 1
Published: about 6 years ago