10.3389/fimmu.2018.01687

Optimized Threshold Inference for Partitioning of Clones From High-Throughput B Cell Repertoire Sequencing Data
Cited by: 18
Author(s): Nima Nouri, Steven H. Kleinstein
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0176353

Intracellular signaling entropy can be a biomarker for predicting the development of cervical intraepithelial neoplasia
Cited by: 4
Author(s): Masakazu Sato, Kei Kawana, Katsuyuki Adachi, Asaha Fujimoto, Midori Yoshida, Hitomi Nakamura, Hidetoshi Nishida, Tatsuo Inoue, Ayumi Taguchi, Juri Ogishima, Shuichiro Eguchi, Aki Yamashita, Kensuke Tomio, Osamu Wada-Hiraike, Katsutoshi Oda, Takeshi Nagamatsu, Yutaka Osuga, Tomoyuki Fujii
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0207752

An assessment of the performance of the logistic mixed model for analyzing binary traits in maize and sorghum diversity panels
Cited by: 10
Author(s): Esperanza M. Shenstone, Julian Cooper, Brian R. Rice, Martin Bohn, Tiffany M. Jamann, Alexander E. Lipka
Software Mentions: 1
Published: almost 8 years ago

10.1007/s00125-021-05461-z

Physical activity attenuates postprandial hyperglycaemia in homozygous TBC1D4 loss-of-function mutation carriers
Cited by: 5
Author(s): Theresia M. Schnurr, Emil Jørsboe, Alexandra Chadt, Inger Katrine Dahl-Petersen, Jonas M. Kristensen, Jørgen F. P. Wojtaszewski, Christian Springer, Peter Bjerregaard, Søren Brage, Oluf Pedersen, Ida Moltke, Niels Grarup, Hadi Al‐Hasani, Anders Albrechtsen, Marit Eika Jørgensen, Torben Hansen
Software Mentions: 1
Published: over 5 years ago

10.3389/fnins.2018.00592

Targeted Sequencing of Alzheimer Disease Genes in African Americans Implicates Novel Risk Variants
Cited by: 24
Author(s): Mark W. Logue, Daniel Lancour, John Farrell, Irina Simkina, M. Daniele Fallin, Kathryn L. Lunetta, Lindsay A. Farrer
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0181812

Reprogramming human gallbladder cells into insulin-producing β-like cells
Cited by: 33
Author(s): Feorillo Galivo, Eric Benedetti, Yuhan Wang, Carl Pelz, Jonathan Schug, Klaus H. Kaestner, Markus Grompe
Software Mentions: 1
Published: about 9 years ago

10.1111/1477-9552.12403

Demand for Crop Insurance in Developing Countries: New Evidence from India
Cited by: 23
Author(s): Ranjan Ghosh, Shweta Gupta, Vartika Singh, Patrick S. Ward
Software Mentions: 1
Published: almost 6 years ago

10.15252/emmm.201911419

Cystatin B is essential for proliferation and interneuron migration in individuals with <scp>EPM</scp> 1 epilepsy
Cited by: 24
Author(s): Francesco Di Matteo, Fabrizia Pipicelli, Christina Kyrousi, Isabella Tovecci, Eduardo Penna, Marianna Crispino, Angela Chambery, Rosita Russo, Ane Cristina Ayo-Martin, Martina Giordano, Anke Hoffmann, Emilio Ciusani, Laura Canafoglia, Magdalena Götz, Rossella Di Giaimo, Silvia Cappello
Software Mentions: 1
Published: over 6 years ago

10.1186/s41181-018-0045-0

Synthesis, radiosynthesis, in vitro and first in vivo evaluation of a new matrix metalloproteinase inhibitor based on γ-fluorinated α-sulfonylaminohydroxamic acid
Cited by: 7
Author(s): Verena Hugenberg, Malte Behrends, Stefan Wagner, Sven Hermann, Michael Schäfers, Hartmuth C. Kolb, Katrin Szardenings, Joseph C. Walsh, Luis O. Gómez, Klaus Kopka, Günter Haufe
Software Mentions: 1
Published: about 8 years ago

10.3389/fmicb.2021.699415

Proteomics Analysis Reveals Bacterial Antibiotics Resistance Mechanism Mediated by ahslyA Against Enoxacin in Aeromonas hydrophila
Cited by: 1
Author(s): Zhen Li, Lishan Zhang, Qingli Song, Guibin Wang, Wenxiao Yang, Huamei Tang, S. Ramanathan, Gang Li, Xiangmin Lin
Software Mentions: 1
Published: about 5 years ago

10.1038/s41438-018-0116-0

Genome-wide comprehensive analysis of transcriptomes and small RNAs offers insights into the molecular mechanism of alkaline stress tolerance in a citrus rootstock
Cited by: 24
Author(s): Juxun Wu, Junying Cao, Mei Tsz Su, Guizhi Feng, Yu Xu, Hualin Yi
Software Mentions: 1
Published: over 7 years ago

10.3390/jcm8122026

Human Ovarian Granulosa Cells Isolated during an IVF Procedure Exhibit Differential Expression of Genes Regulating Cell Division and Mitotic Spindle Formation
Cited by: 3
Author(s): Maciej Brązert, Wiesława Kranc, Błażej Chermuła, Katarzyna Kowalska, Maurycy Jankowski, Piotr Celichowski, Michal Ješeta, Hanna Piotrowska‐Kempisty, Leszek Pawełczyk, Maciej Zabel, Paul Mozdziak, Bartosz Kempisty
Software Mentions: 1
Published: almost 7 years ago

10.1186/1868-7083-5-16

Methylation profiling and evaluation of demethylating therapy in renal cell carcinoma
Cited by: 34
Author(s): Christopher J. Ricketts, Mark R. Morris, Dean Gentle, Salwati Shuib, Michael D. Brown, Noel W. Clarke, Wenbin Wei, Paul Nathan, Farida Latif, Eamonn R. Maher
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0004955

A Cross-Study Transcriptional Analysis of Parkinson's Disease
Cited by: 79
Author(s): Greg T. Sutherland, Nicholas Matigian, Alistair M. Chalk, Matthew Anderson, Peter A. Silburn, Alan Mackay‐Sim, Christine A. Wells, George D. Mellick
Software Mentions: 1
Published: over 17 years ago

10.1186/gb-2008-9-5-r86

GeneCount: genome-wide calculation of absolute tumor DNA copy numbers from array comparative genomic hybridization data
Cited by: 15
Author(s): Heidi Lyng, Malin Lando, Runar S Brøvig, Debbie Hege Svendsrud, Morten Johansen, Eivind Galteland, Odd Terje Brustugun, Leonardo A. Meza‐Zepeda, Ola Myklebost, Gunnar B. Kristensen, Eivind Hovig, Trond Stokke
Software Mentions: 1
Published: over 18 years ago

10.7150/thno.50571

KDM6A promotes imatinib resistance through YY1-mediated transcriptional upregulation of TRKA independently of its demethylase activity in chronic myelogenous leukemia
Cited by: 19
Author(s): Chengwan Zhang, Li Shen, Yifu Zhu, Ran Xu, Zhong‐Liang Deng, Xiaoning Liu, Yihan Ding, Chunling Wang, Yuye Shi, Liye Bei, Dongping Wei, Rick F. Thorne, Xu Dong Zhang, Liang Yu, Song Chen
Software Mentions: 1
Published: over 5 years ago

10.7150/ijbs.56657

SARS-CoV-2-induced Overexpression of miR-4485 Suppresses Osteogenic Differentiation and Impairs Fracture Healing
Cited by: 23
Author(s): Bobin Mi, Yuan Xiong, Chenming Zhang, Wu Zhou, Lang Chen, Faqi Cao, Fenghua Chen, Zhi Geng, Adriana C. Panayi, Yun-Fan Sun, Lin Wang, Guohui Liu
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms18122673

Expression Profile of Genes Regulating Steroid Biosynthesis and Metabolism in Human Ovarian Granulosa Cells—A Primary Culture Approach
Cited by: 25
Author(s): Wiesława Kranc, Maciej Brązert, Katarzyna Ożegowska, Mariusz J. Nawrocki, Joanna Budna, Piotr Celichowski, Marta Dyszkiewicz-Konwińska, Maurycy Jankowski, Michal Ješeta, Leszek Pawełczyk, M Bruska, Michał Nowicki, Maciej Zabel, Bartosz Kempisty
Software Mentions: 1
Published: over 8 years ago

10.1111/1751-7915.13395

Effect of forest fire prevention treatments on bacterial communities associated with productive<i>Boletus edulis</i>sites
Cited by: 18
Author(s): Olaya Mediavilla, József Geml, Jaime Olaizola, Juan Rueda, Petr Baldrián, Pablo Martín‐Pinto
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0091840

Selection of Higher Order Regression Models in the Analysis of Multi-Factorial Transcription Data
Cited by: 3
Author(s): Olivia Prazeres da Costa, Arthur Hoffman, Johannes W. Rey, Ulrich Mansmann, Thorsten Buch, Achim Tresch
Software Mentions: 1
Published: over 12 years ago

10.1186/s12859-018-2418-5

miRTissue: a web application for the analysis of miRNA-target interactions in human tissues
Cited by: 7
Author(s): Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Alfonso Urso
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2407-13-245

IR/IGF1R signaling as potential target for treatment of high-grade osteosarcoma
Cited by: 70
Author(s): Marieke L. Kuijjer, Elisabeth F. P. Peterse, Brendy E.W.M. van den Akker, Inge H. Briaire-de Bruijn, Massimo Serra, Leonardo A. Meza‐Zepeda, Ola Myklebost, A. Bassim Hassan, Pancras C.W. Hogendoorn, Anne Marie Cleton-Jansen
Software Mentions: 1
Published: over 13 years ago

10.1186/1471-2164-14-96

Ultra-deep mutant spectrum profiling: improving sequencing accuracy using overlapping read pairs
Cited by: 43
Author(s): Haiyin Chen-Harris, Monica K. Borucki, Clinton Torres, Tom Slezak, Jonathan Allen
Software Mentions: 1
Published: over 13 years ago

10.3390/ijms22042082

New Gene Markers Expressed in Porcine Oviductal Epithelial Cells Cultured Primary In Vitro Are Involved in Ontological Groups Representing Physiological Processes of Porcine Oocytes
Cited by: 1
Author(s): Magdalena Kulus, Wiesława Kranc, Katarzyna Wojtanowicz-Markiewicz, Piotr Celichowski, Agata Światły-Błaszkiewicz, Eliza Matuszewska, Patrycja Sujka‐Kordowska, Aneta Konwerska, Maciej Zdun, Rut Bryl, Maria Wieczorkiewicz, Jakub Kulus, Boguslawa A. Stelmach, Katarzyna Stefańska, Joanna Budna‐Tukan, James N. Petitte, Paul Mozdziak, K. Ratajczak, Jan Matysiak, J. M. Jaśkowski, Michał Nowicki, Bartosz Kempisty
Software Mentions: 1
Published: over 5 years ago

10.1038/s41598-020-73326-3

Graph-based exploitation of gene ontology using GOxploreR for scrutinizing biological significance
Cited by: 15
Author(s): Kalifa Manjang, Shailesh Tripathi, Olli Yli‐Harja, Matthias Dehmer, Frank Emmert‐Streib
Software Mentions: 1
Published: almost 6 years ago

10.1007/s11306-020-01712-z

Distinct serum metabolomic signatures of multiparous and primiparous dairy cows switched from a moderate to high-grain diet during early lactation
Cited by: 5
Author(s): Cátia Pacífico, A. Stauder, Nicole Reisinger, Heidi E. Schwartz-Zimmermann, Qendrim Zebeli
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.26014

MicroCT-based phenomics in the zebrafish skeleton reveals virtues of deep phenotyping in a distributed organ system
Cited by: 56
Author(s): Matthew Hur, Charlotte Gistelinck, Philippe Huber, Jane Lee, Marjorie H. Thompson, Adrian T. Monstad-Rios, Claire J. Watson, Sarah K. McMenamin, Andy Willaert, David M. Parichy, Paul Coucke, Ronald Y. Kwon
Software Mentions: 1
Published: almost 9 years ago

10.1093/gbe/evaa166

Genomic Evidence for Sensorial Adaptations to a Nocturnal Predatory Lifestyle in Owls
Cited by: 8
Author(s): Pamela Espíndola‐Hernández, Jakob C. Mueller, Martina Carrete, Stefan Boerno, Bart Kempenaers
Software Mentions: 1
Published: about 6 years ago

10.1038/srep27244

Quantifying promoter activity during the developmental cycle of Chlamydia trachomatis
Cited by: 7
Author(s): Yanguang Cong, Leiqiong Gao, Yan Zhang, Yuqi Xian, Hua Zeng, Hiba Elaasar, Li Shen
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0141369

Whole-Genome Sequencing and Comparative Genome Analysis of Bacillus subtilis Strains Isolated from Non-Salted Fermented Soybean Foods
Cited by: 28
Author(s): Masao Kamada, Sumitaka Hase, Kazushi Fujii, Masato Miyake, Kengo Sato, Keitarou Kimura, Yasubumi Sakakibara
Software Mentions: 1
Published: almost 11 years ago

10.1186/s40478-016-0364-x

Telomere shortening leads to an acceleration of synucleinopathy and impaired microglia response in a genetic mouse model
Cited by: 35
Author(s): Annika Scheffold, Inge R. Holtman, Sandra Dieni, Nieske Brouwer, Sarah‐Fee Katz, Billy Michael Chelliah Jebaraj, Philipp J. Kahle, Bastian Hengerer, André Lechel, Stephan Stilgenbauer, Erik Boddeke, Bart J. L. Eggen, K. Lenhard Rudolph, Knut Biber
Software Mentions: 1
Published: about 10 years ago

10.1186/s12859-015-0789-4

Inferring plant microRNA functional similarity using a weighted protein-protein interaction network
Cited by: 12
Author(s): Jun Meng, Dong Liu, Yushi Luan
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2105-11-562

An improved method for scoring protein-protein interactions using semantic similarity within the gene ontology
Cited by: 156
Author(s): Shobhit Jain, Gary D. Bader
Software Mentions: 1
Published: almost 16 years ago

10.1186/1471-2164-11-704

Human transcriptional interactome of chromatin contribute to gene co-expression
Cited by: 25
Author(s): Xiao Dong, Chao Li, Yunqin Chen, Guohui Ding, Yixue Li
Software Mentions: 1
Published: over 15 years ago

10.1186/s12864-021-07864-z

Identifying potential association on gene-disease network via dual hypergraph regularized least squares
Cited by: 3
Author(s): Hongpeng Yang, Yongsheng Ding, Jijun Tang, Fei Guo
Software Mentions: 1
Published: about 5 years ago

10.1186/1755-8794-6-57

Integrating human omics data to prioritize candidate genes
Cited by: 32
Author(s): Yong Chen, Xuebing Wu, Rui Jiang
Software Mentions: 1
Published: over 12 years ago

10.1186/1752-0509-4-S2-S1

Optimization meets systems biology
Cited by: 48
Author(s): Yong Wang, Xiang-Sun Zhang, Luonan Chen
Software Mentions: 1
Published: almost 16 years ago

10.1186/s13071-017-1989-8

Abundance, zoonotic potential and risk factors of intestinal parasitism amongst dog and cat populations: The scenario of Crete, Greece
Cited by: 81
Author(s): Despoina Kostopoulou, Edwin Claerebout, Dimitrios Arvanitis, Panagiota Ligda, Nikolaos Voutzourakis, Stijn Casaert, Smaragda Sotiraki
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pntd.0004381

Coarse-resolution Ecology of Etiological Agent, Vector, and Reservoirs of Zoonotic Cutaneous Leishmaniasis in Libya
Cited by: 20
Author(s): Abdallah M. Samy, Badereddin B Annajar, Mostafa Ramadhan Dokhan, Samia Boussaa, A. Townsend Peterson
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pntd.0003250

Mapping the Potential Risk of Mycetoma Infection in Sudan and South Sudan Using Ecological Niche Modeling
Cited by: 43
Author(s): Abdallah M. Samy, Wendy W. J. van de Sande, Ahmed H. Fahal, A. Townsend Peterson
Software Mentions: 1
Published: almost 12 years ago

10.1371/journal.pone.0152508

Understanding Peripheral Bat Populations Using Maximum-Entropy Suitability Modeling
Cited by: 1
Author(s): Paul R. Barnhart, Erin H. Gillam
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0066071

Pathogen-Host Associations and Predicted Range Shifts of Human Monkeypox in Response to Climate Change in Central Africa
Cited by: 30
Author(s): Henri A. Thomassen, Trevon Fuller, Salvi Asefi-Najafabady, Julia A. G. Shiplacoff, Prime Mulembakani, Seth Blumberg, Sara C. Johnston, Neville K. Kisalu, Timothée L. Kinkela, Joseph N. Fair, Nathan Wolfe, Robert L. Shongo, Matthew LeBreton, Hermann Meyer, Linda L. Wright, Jean-Jacques Muyembe, Wolfgang Buermann, Emile Okitolonda, Lisa E. Hensley, James O. Lloyd‐Smith, Thomas B. Smith, Anne W. Rimoin
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0199811

Climatic niche shift in the amphitropical disjunct grass Trichloris crinita
Cited by: 8
Author(s): R. Emiliano Quiroga, Andrea C. Premoli, Roberto Fernández
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0076168

The Phylogeographic History of the New World Screwworm Fly, Inferred by Approximate Bayesian Computation Analysis
Cited by: 21
Author(s): Pablo Fresia, Ana Maria Lima de Azeredo-Espin, Mariana L. Lyra
Software Mentions: 1
Published: almost 13 years ago

10.1371/journal.pone.0015297

Conclusions about Niche Expansion in Introduced Impatiens walleriana Populations Depend on Method of Analysis
Cited by: 63
Author(s): Lisa Mandle, Dan L. Warren, Matthias H. Hoffmann, A. Townsend Peterson, Johanna Schmitt, Eric J. B. von Wettberg
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0068037

Using Citizen Science Data to Model the Distributions of Common Songbirds of Turkey Under Different Global Climatic Change Scenarios
Cited by: 24
Author(s): Moris Abolafya, Ortaç Onmuş, Çağan H. Şekercioğlu, Raşi̇t Bi̇lgi̇n
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0085137

Potential Geographic Distribution of Hantavirus Reservoirs in Brazil
Cited by: 26
Author(s): Stefan Vilges de Oliveira, Luis E. Escobar, A. Townsend Peterson, Rodrigo Gurgel-Gonçalves
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0210122

Mapping the global potential distributions of two arboviral vectors Aedes aegypti and Ae. albopictus under changing climate
Cited by: 140
Author(s): Mahmoud Kamal, M. A. Kenawy, Magda H. Rady, Amany Khaled, Abdallah M. Samy
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0062542

Integrative Phylogeography of Calotriton Newts (Amphibia, Salamandridae), with Special Remarks on the Conservation of the Endangered Montseny Brook Newt (Calotriton arnoldi)
Cited by: 18
Author(s): Emilio Valbuena‐Ureña, Fèlix Amat, Salvador Carranza
Software Mentions: 1
Published: about 13 years ago

10.1371/journal.pone.0179093

Potential distribution of mosquito vector species in a primary malaria endemic region of Colombia
Cited by: 21
Author(s): Mariano Altamiranda‐Saavedra, Sair Arboleda, Juan L. Parra, A. Townsend Peterson, Margarita M. Correa
Software Mentions: 1
Published: about 9 years ago

10.1186/1756-3305-6-271

Effects of global changes on the climatic niche of the tick Ixodes ricinus inferred by species distribution modelling
Cited by: 106
Author(s): Daniele Porretta, Valentina Mastrantonio, Sara Amendolia, Stefano Gaiarsa, Sara Epis, C. Genchi, Claudio Bandi, Domenico Otranto, Sandra Urbanelli
Software Mentions: 1
Published: almost 13 years ago

10.3390/geriatrics3040084

Geriatrics Evaluation and Management in the Veterans Administration—An Historical Perspective
Cited by: 2
Author(s): James S. Powers, Kathryn J. Eubank
Software Mentions: 1
Published: over 7 years ago

10.3389/fphys.2019.00686

Association of Serum miR-186-5p With the Prognosis of Acute Coronary Syndrome Patients After Percutaneous Coronary Intervention
Cited by: 20
Author(s): Zhuoling Li, Jia Wu, Weishi Wei, Xiwen Cai, Jing Yan, Jiuzhou Song, Cheng Wang, Junjun Wang
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2164-13-506

Advances in genome-wide RNAi cellular screens: a case study using the Drosophila JAK/STAT pathway
Cited by: 22
Author(s): Katherine H. Fisher, Victoria M Wright, Amy Taylor, Martin P. Zeidler, Stephen Brown
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0018261

RNAi-Based Screening Identifies Kinases Interfering with Dioxin-Mediated Up-Regulation of CYP1A1 Activity
Cited by: 18
Author(s): David Gilot, Nolwenn Le Meur, Fanny Giudicelli, Marc Le Vée, Dominique Lagadic‐Gossmann, Nathalie Théret, Olivier Fardel
Software Mentions: 1
Published: over 15 years ago

10.1371/journal.pone.0013177

RNAi Screen Indicates Widespread Biological Function for Human Natural Antisense Transcripts
Cited by: 33
Author(s): Mohammad Ali Faghihi, Jannet Kocerha, Farzaneh Modarresi, Pär G. Engström, Alistair M. Chalk, Eric Koesema, Georges St. Laurent, Claes Wahlestedt
Software Mentions: 1
Published: almost 16 years ago

10.1371/journal.pone.0054477

ZNF-Mediated Resistance to Imatinib Mesylate in Gastrointestinal Stromal Tumor
Cited by: 17
Author(s): Lori Rink, Michael F. Ochs, Yan Zhou, Margaret von Mehren, Andrew K. Godwin
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0031193

Identification of New Genes Involved in Human Adipogenesis and Fat Storage
Cited by: 43
Author(s): Jörn Söhle, Nikolaus Machuy, Elma Smailbegovic, Ursula Holtzmann, Elke Grönniger, Horst Wenck, Franz Stäb, Marc Winnefeld
Software Mentions: 1
Published: over 14 years ago

10.1186/s13073-015-0170-2

Functional fingerprinting of human mesenchymal stem cells using high-throughput RNAi screening
Cited by: 4
Author(s): Gerrit Erdmann, Michael Suchanek, Patrick Horn, Fritz Graf, Christian Volz, Thomas Horn, Xian Zhang, Wolfgang Wagner, Anthony D. Ho, Michael Boutros
Software Mentions: 1
Published: over 11 years ago

10.1016/j.stemcr.2017.08.023

An RNAi Screen Reveals an Essential Role for HIPK4 in Human Skin Epithelial Differentiation from iPSCs
Cited by: 7
Author(s): Lionel Larribère, Marta Galach, Daniel Novak, Karla Arévalo, Hans Christian Volz, Hans Jürgen Stark, Petra Boukamp, Michael Boutros, Jochen Utikal
Software Mentions: 1
Published: almost 9 years ago

10.3389/fimmu.2019.01170

The Transcriptional Landscape of Microglial Genes in Aging and Neurodegenerative Disease
Cited by: 46
Author(s): Luke W. Bonham, Daniel W. Sirkis, Jennifer S. Yokoyama
Software Mentions: 1
Published: about 7 years ago

10.1186/1741-7007-10-92

Logic modeling and the ridiculome under the rug
Cited by: 5
Author(s): Michael L. Blinov, Ion I. Moraru
Software Mentions: 1
Published: almost 14 years ago

10.1371/journal.pone.0127216

Discrete Logic Modelling Optimization to Contextualize Prior Knowledge Networks Using PRUNET
Cited by: 20
Author(s): Ana R. Rodrı́guez, Isaac Crespo, Ganna Androsova, Antonio del Sol
Software Mentions: 1
Published: about 11 years ago

10.1038/cddis.2015.393

Prediction of disease–gene–drug relationships following a differential network analysis
Cited by: 55
Author(s): Sascha Zickenrott, Vladimir Espinosa Angarica, Bimal Babu Upadhyaya, Antonio del Sol
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0025718

Climate Change and American Bullfrog Invasion: What Could We Expect in South America?
Cited by: 55
Author(s): Javier Nori, J. Nicolás Urbina‐Cardona, Rafael Loyola, Julián N. Lescano, Gerardo C. Leynaud
Software Mentions: 1
Published: almost 15 years ago

10.7554/eLife.48093

B cells extract antigens at Arp2/3-generated actin foci interspersed with linear filaments
Cited by: 26
Author(s): Sophie Isabel Roper, Laabiah Wasim, Dessislava Malinova, Michael Way, Susan Cox, Pavel Tolar
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0126182

Environmental Niche Overlap between Common and Dusky Dolphins in North Patagonia, Argentina
Cited by: 13
Author(s): Guillermo Svendsen, M. Alejandra Romero, Gabriela Noemí Williams, Domingo A. Gagliardini, Enrique A. Crespo, Silvana Laura Dans, Raúl González
Software Mentions: 1
Published: about 11 years ago

10.3897/zookeys.484.8869

The distribution and taxonomy of Lissotriton newts in Turkey (Amphibia, Salamandridae)
Cited by: 8
Author(s): Ben Wielstra, Emin Bozkurt, Kurtuluş Olgun
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0154464

A Presence-Only Model of Suitable Roosting Habitat for the Endangered Indiana Bat in the Southern Appalachians
Cited by: 21
Author(s): Kristina R. Hammond, Joy M. O’Keefe, Stephen Aldrich, Susan C. Loeb
Software Mentions: 1
Published: over 10 years ago

10.1002/ece3.1737

Evidence of niche shift and global invasion potential of the Tawny Crazy ant, <i><scp>N</scp>ylanderia fulva</i>
Cited by: 55
Author(s): Sunil Kumar, Edward G. LeBrun, Thomas J. Stohlgren, Jared A. Stabach, Danny L. McDonald, David H. Oi, John S. LaPolla
Software Mentions: 1
Published: almost 11 years ago

10.1140/epjc/s10052-016-4257-8

Transverse pion structure beyond leading twist in constituent models
Cited by: 17
Author(s): Cédric Lorcé, B. Pasquini, P. Schweitzer
Software Mentions: 1
Published: about 10 years ago

10.7150/jca.37762

Cadherin 13 Inhibits Pancreatic Cancer Progression and Epithelial-mesenchymal Transition by Wnt/β-Catenin Signaling
Cited by: 16
Author(s): Dengfei Xu, Hui Yuan, Zihong Meng, Chunmei Yang, Zefang Li, Mengge Li, Zhigang Zhang, Guangrong Yu, Hong Tu
Software Mentions: 1
Published: over 6 years ago

10.1007/s10531-018-1507-0

Snub-nosed monkeys (Rhinopithecus): potential distribution and its implication for conservation
Cited by: 36
Author(s): Jonas Nüchel, Peder Klith Bøcher, Wen Xiao, A‐Xing Zhu, Jens‐Christian Svenning
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0163155

Analysis of SOX2-Regulated Transcriptome in Glioma Stem Cells
Cited by: 11
Author(s): Arlet María Acanda de la Rocha, Hernando López-Bertoni, Elizabeth Guruceaga, Marisol González-Huarriz, Naiara Martínez-Vélez, Enric Xipell, Juan Fueyo, Candelaria Gomez-Manzano, Marta M. Alonso
Software Mentions: 1
Published: almost 10 years ago

10.1186/s13578-018-0201-y

Epigenetic alterations in TRAMP mice: epigenome DNA methylation profiling using MeDIP-seq
Cited by: 7
Author(s): Wenji Li, Ying Huang, Davit Sargsyan, Tin Oo Khor, Yue Guo, Limin Shu, Anne Yuqing Yang, Chengyue Zhang, Ximena Paredes-Gonzalez, Michael P. Verzi, Ronald P. Hart, Ah‐Ng Tony Kong
Software Mentions: 1
Published: over 8 years ago

10.3389/fgene.2014.00098

categoryCompare, an analytical tool based on feature annotations
Cited by: 28
Author(s): Robert M. Flight, Benjamin J. Harrison, Fahim Mohammad, Mary Bartlett Bunge, Lawrence Moon, Jeffrey C. Petruska, Eric C. Rouchka
Software Mentions: 1
Published: over 12 years ago

10.1590/1678-4685-GMB-2020-0080

Molecular evolution and diversification of the GRF transcription factor family
Cited by: 12
Author(s): Leila Spagnolo Fonini, Fernanda Lazzarotto, Pedro M. Barros, Caroline Cabreira-Cagliari, Mario Martins, Nelson J. M. Saibo, Andreia Carina Turchetto‐Zolet, Márcia Margis‐Pinheiro
Software Mentions: 1
Published: over 6 years ago

10.1186/s13072-019-0261-1

Coupling of PARP1-mediated chromatin structural changes to transcriptional RNA polymerase II elongation and cotranscriptional splicing
Cited by: 36
Author(s): Elena A. Matveeva, Qamar M. H. Al-Tinawi, Eric C. Rouchka, Yvonne Fondufe‐Mittendorf
Software Mentions: 1
Published: over 7 years ago

10.1186/1471-2458-14-306

Factors associated with place of delivery in rural Nepal
Cited by: 26
Author(s): Shivani Sharma, Amod Kumar Poudyal, Bharat Mani Devkota, S Singh
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2105-12-S7-A16

categoryCompare: high-throughput data meta-analysis using gene annotations
Cited by: 0
Author(s): Robert M Flight, Jeffrey C. Petruska, Benjamin J. Harrison, Eric C. Rouchka
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.ppat.1002621

Virulence Regulator EspR of Mycobacterium tuberculosis Is a Nucleoid-Associated Protein
Cited by: 112
Author(s): Benjamin Blasco, Jeffrey M. Chen, Ruben C. Hartkoorn, Claudia Sala, Swapna Uplekar, Jacques Rougemont, F. Pojer, Stewart T. Cole
Software Mentions: 1
Published: over 14 years ago

10.1186/1471-2458-8-344

Border malaria in China: knowledge and use of personal protection by minority populations and implications for malaria control: a questionnaire-based survey
Cited by: 36
Author(s): Sarah Moore, Min Xia, Nigel Hill, Caroline Jones, Zaixing Zhang, M. M. Cameron
Software Mentions: 1
Published: almost 18 years ago

10.1186/1471-2458-10-S1-S9

Assessment of core capacities for the International Health Regulations (IHR[2005]) – Uganda, 2009
Cited by: 23
Author(s): Joseph F. Wamala, Charles Okot, Issa Makumbi, Nasan Natseri, Annet Kisakye, Miriam Nanyunja, Barnabas Bakamutumaho, Julius J. Lutwama, Rajesh Sreedharan, Jun Xing, Peter Gaturuku, T. Aisu, Fernando Silveira, Stella Chungong
Software Mentions: 1
Published: over 16 years ago

10.1038/srep39998

Mechanisms of Yersinia YopO kinase substrate specificity
Cited by: 9
Author(s): Wei Lin Lee, Pavithra Singaravelu, Sheena Wee, Bin Xue, Khay Chun Ang, Jayantha Gunaratne, Jonathan M. Grimes, Kunchithapadam Swaminathan, Robert Robinson
Software Mentions: 1
Published: over 9 years ago

10.18632/aging.100961

Metabolic drift in the aging brain
Cited by: 73
Author(s): Julijana Ivanišević, Kelly L. Stauch, Michael Petrascheck, H. Paul Benton, Adrian A. Epstein, Mingliang Fang, Santhi Gorantla, Minerva Tran, Linh Hoang, Michael E. Kurczy, Michael D. Boska, Howard Eliot Gendelman, Howard S. Fox, Gary Siuzdak
Software Mentions: 1
Published: over 10 years ago

10.1111/acel.12379

Atypical antidepressants extend lifespan of<i>Caenorhabditis elegans</i>by activation of a non‐cell‐autonomous stress response
Cited by: 17
Author(s): Sunitha Rangaraju, Gregory M. Solis, S. Andersson, Rafael L. Gomez‐Amaro, Rozina Kardakaris, Caroline D. Broaddus, Alexander B. Niculescu, Michael Petrascheck
Software Mentions: 1
Published: about 11 years ago

10.1186/s12898-018-0160-5

Inferring ecological explanations for biogeographic boundaries of parapatric Asian mountain frogs
Cited by: 16
Author(s): Junhua Hu, Jianping Jiang
Software Mentions: 1
Published: over 8 years ago

10.1093/aobpla/plz037

How diverse can rare species be on the margins of genera distribution?
Cited by: 7
Author(s): Alice Backes, Geraldo Mäder, Caroline Turchetto, Ana Lúcia Anversa Segatto, Jéferson Nunes Fregonezi, Sandro L. Bonatto, Loreta B. Freitas
Software Mentions: 1
Published: about 7 years ago

10.1186/s12889-018-5981-9

Timely initiation of postpartum contraceptive utilization and associated factors among women of child bearing age in Aroressa District, Southern Ethiopia: a community based cross-sectional study
Cited by: 26
Author(s): Aregahegn Dona, Muluemebet Abera, Tsedach Alemu, Dawit Hawaria
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2458-13-130

Determinants of skilled attendance for delivery in Northwest Ethiopia: a community based nested case control study
Cited by: 60
Author(s): Zelalem Birhanu Mengesha, Gashaw Andargie Biks, Tadesse Awoke Ayele, Gizachew Assefa Tessema, Digsu N. Koye
Software Mentions: 1
Published: over 13 years ago

10.1186/s13104-019-4104-8

Measles case, immunization coverage and its determinant factors among 12–23 month children, in Bassona Worena Woreda, Amhara Region, Ethiopia, 2018
Cited by: 15
Author(s): Ayele Mamo Abebe, Tamiru Mengistu, Abinet Dagnaw Mekuria
Software Mentions: 1
Published: over 7 years ago

10.1002/acn3.50931

Intrathecal cytokine profile in neuropathy with anti‐neurofascin 155 antibody
Cited by: 11
Author(s): Hidenori Ogata, Zhihui Xu, Ryo Yamasaki, Takayuki Fujii, Akira Machida, Nobutoshi Morimoto, Kenichi Kaida, Teruaki Masuda, Yukio Ando, Motoi Kuwahara, Susumu Kusunoki, Yuri Nakamura, Takuya Matsushita, Noriko Isobe, Jun Ichi Kira
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13104-019-4589-1

Assessing the prevalence and risk factors of pre-diabetes among the community of Iganga municipality, Uganda: a cross sectional study
Cited by: 8
Author(s): Christine Aramo, Anthony Peter Oyom, Emmanuel Okello, Victoria Acam, John Charles Okiria, Bashir Mwambi, Caesar Oyet
Software Mentions: 1
Published: almost 7 years ago

10.1186/s13104-015-1661-3

Association between the rs12255372 variant of the TCF7L2 gene and obesity in a Cameroonian population
Cited by: 9
Author(s): Elvis Ndonwi Ngwa, Eugène Sobngwi, Barbara Atogho-Tiedeu, Jean Jacques Noubiap, Olivier Sontsa Donfack, Magellan Guewo-Fokeng, Edith Pascale Mato Mofo, Priscille Pokam Fosso, E. Djahmeni, Rosine Djokam-Dadjeu, Marie-Solange Evehe, Folefac Aminkeng, Wilfred Fon Mbacham, Jean Claude Mbanya
Software Mentions: 1
Published: over 10 years ago

10.1186/s13104-017-2422-2

Prevalence of cardiovascular morbidities in Myanmar
Cited by: 13
Author(s): Ko Ko Zaw, Nwe Nwe, Su Su Hlaing
Software Mentions: 1
Published: over 9 years ago

10.1128/AAC.01640-17

Discovery of New Inhibitors of Toxoplasma gondii via the Pathogen Box
Cited by: 49
Author(s): Jérémy Spalenka, Sandie Escotte-Binet, Ali Bakiri, Jane Hubert, Jean‐Hugues Renault, Frédéric Velard, Simon Duchateau, Dominique Aubert, A Huguenin, Isabelle Villena
Software Mentions: 1
Published: over 8 years ago

10.1186/s13104-019-4646-9

The magnitude and associated factors of postpartum hemorrhage among mothers who delivered at Debre Tabor general hospital 2018
Cited by: 16
Author(s): Daniel Habitamu, Yitayal Ayalew Goshu, Liknaw Bewket Zeleke
Software Mentions: 1
Published: almost 7 years ago

10.1093/aobpla/plw051

Reproductive traits affect the rescue of valuable and endangered multipurpose tropical trees
Cited by: 4
Author(s): Viviane C.O. Sinébou, Muriel Quinet, B. C. Ahohuendo, Anne‐Laure Jacquemart
Software Mentions: 1
Published: about 11 years ago

10.1186/1756-0500-7-545

Identification of drug-resistant Salmonella from food handlers at the University of Gondar, Ethiopia
Cited by: 24
Author(s): Legesse Garedew-Kifelew, Nishanwork Wondafrash, Amsalu Feleke
Software Mentions: 1
Published: about 12 years ago

10.1186/s13104-019-4283-3

Prevalence and risk factors of pneumococcal nasopharyngeal carriage in healthy children attending kindergarten, in district of Arsi Zone, South East, Ethiopia
Cited by: 9
Author(s): Gizaw Eshetu Abaye, Hailu Fekadu, Kelili Haji, Desalegn Alemu, Antehun Alemayehu Anjulo, Debela Tolessa Yadate
Software Mentions: 1
Published: over 7 years ago