10.1371/journal.pntd.0009487

The 2021 Ebola virus outbreak in Guinea: Mistrust and the shortcomings of outbreak surveillance
Cited by: 5
Author(s): Manuel Raab, Elisa Roth, Vinh-Kim Nguyen, Günter Fröschl
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pmed.1002705

Mobile detection of autism through machine learning on home video: A development and prospective validation study
Cited by: 129
Author(s): Qandeel Tariq, Jena Daniels, Jessey Schwartz, Peter Washington, Haik Kalantarian, Dennis P. Wall
Software Mentions: 1
Published: almost 8 years ago

10.1371/journal.pone.0080261

TAL Effectors Specificity Stems from Negative Discrimination
Cited by: 17
Author(s): Basile I. M. Wicky, Marco Stenta, Matteo Dal Peraro
Software Mentions: 1
Published: almost 13 years ago

10.3389/fmolb.2020.586075

Exploring Allosteric Signaling in the Exit Tunnel of the Bacterial Ribosome by Molecular Dynamics Simulations and Residue Network Model
Cited by: 8
Author(s): Pelin Güzel, Hatice Zeynep Yildirim, Merve Yuce, Özge Kürkçüoğlu
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.ppat.1002667

The Lipopolysaccharide from Capnocytophaga canimorsus Reveals an Unexpected Role of the Core-Oligosaccharide in MD-2 Binding
Cited by: 32
Author(s): Simon Ittig, Buko Lindner, Marco Stenta, Pablo Manfredi, Evelina L. Zdorovenko, Yuriy A. Knirel, Matteo Dal Peraro, Guy R. Cornelis, Ulrich Zähringer
Software Mentions: 1
Published: over 14 years ago

10.1038/s41598-017-06586-1

An in-silico glimpse into the pH dependent structural changes of T7 RNA polymerase: a protein with simplicity
Cited by: 10
Author(s): Subhomoi Borkotoky, Chetan Kumar Meena, G. M. Bhalerao, Ayaluru Murali
Software Mentions: 1
Published: about 9 years ago

10.1038/s41598-020-66310-4

Probing the Structural Dynamics of the Catalytic Domain of Human Soluble Guanylate Cyclase
Cited by: 4
Author(s): Rana Rehan Khalid, Arooma Maryam, Uğur Sezerman, Efstratios Mylonas, Abdul Rauf Siddiqi, Michael Kokkinidis
Software Mentions: 1
Published: about 6 years ago

10.1038/s41598-021-86471-0

Molecular dynamics and in silico mutagenesis on the reversible inhibitor-bound SARS-CoV-2 main protease complexes reveal the role of lateral pocket in enhancing the ligand affinity
Cited by: 27
Author(s): Ying Li Weng, Shiv Rakesh Naik, Nadia Dingelstad, Miguel R. Lugo, Subha Kalyaanamoorthy, Aravindhan Ganesan
Software Mentions: 1
Published: over 5 years ago

10.7554/eLife.34353

Microtubule assembly governed by tubulin allosteric gain in flexibility and lattice induced fit
Cited by: 42
Author(s): Maxim Igaev, Helmut Grubmüller
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms22105253

NO● Represses the Oxygenation of Arachidonoyl PE by 15LOX/PEBP1: Mechanism and Role in Ferroptosis
Cited by: 16
Author(s): Karolina Mikulska-Ruminska, Tamil S. Anthonymuthu, Anastasia Levkina, Indira H. Shrivastava, Alexandr A. Kapralov, Hülya Bayır, Valerian E. Kagan, İvet Bahar
Software Mentions: 1
Published: over 5 years ago

10.1002/hsr2.113

Comparison of two serum free light chain assays for the diagnosis of primary plasma cell malignant proliferative disease
Cited by: 10
Author(s): Yang Yang, Xiaoyan Han, Gaofeng Zheng, Zhen Cai
Software Mentions: 1
Published: over 7 years ago

10.1038/srep20362

Novel pseudo-random number generator based on quantum random walks
Cited by: 34
Author(s): Yu‐Guang Yang, Qianqian Zhao
Software Mentions: 1
Published: over 10 years ago

10.1186/s13015-019-0161-8

Non-parametric correction of estimated gene trees using TRACTION
Cited by: 4
Author(s): Sarah Christensen, Erin K. Molloy, Pranjal Vachaspati, Ananya Yammanuru, Tandy Warnow
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-018-4455-x

GATC: a genetic algorithm for gene tree construction under the Duplication-Transfer-Loss model of evolution
Cited by: 1
Author(s): Emmanuel Noutahi, Nadia El-Mabrouk
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2180-12-74

A comparative genomics screen identifies a Sinorhizobium meliloti 1021 sodM-like gene strongly expressed within host plant nodules
Cited by: 10
Author(s): Clothilde Queiroux, Brian K. Washburn, Olivia M. Davis, Jamie M. Stewart, Tess E. Brewer, M.R. Lyons, Kathryn M. Jones
Software Mentions: 1
Published: over 14 years ago

10.1186/s12868-014-0128-0

Regulatory mechanisms of testosterone-stimulated song in the sensorimotor nucleus HVC of female songbirds
Cited by: 17
Author(s): Falk Dittrich, Claudia Ramenda, Doris Grillitsch, Carolina Frankl-Vilches, Meng-Ching Ko, Moritz Hertel, Wolfgang Goymann, A. Ter Maat, Manfred Gahr
Software Mentions: 1
Published: over 11 years ago

10.1097/MD.0000000000004509

Probiotics for prevention and treatment of respiratory tract infections in children
Cited by: 140
Author(s): Yizhong Wang, Xiaolu Li, Ting Ge, Yongmei Xiao, Yang Liao, Yun Cui, Yucai Zhang, Wen‐Zhe Ho, Guangjun Yu, Ting Zhang
Software Mentions: 1
Published: about 10 years ago

10.3390/molecules25071616

Computational Study of Drugs Targeting Nuclear Receptors
Cited by: 11
Author(s): Maša Kenda, Marija Sollner Dolenc
Software Mentions: 1
Published: over 6 years ago

10.1002/mnfr.201100309

Resveratrol inhibits migration and Rac1 activation in EGF- but not PDGF-activated vascular smooth muscle cells
Cited by: 23
Author(s): Mario Kumerz, Elke H. Heiss, Daniel Schachner, Atanas G. Atanasov, Verena M. Dirsch
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0042935

Taurine Induces Proliferation of Neural Stem Cells and Synapse Development in the Developing Mouse Brain
Cited by: 79
Author(s): Mattu Chetana Shivaraj, Guillaume Marcy, Guoliang Low, Jae Ryun Ryu, Xiangna Zhao, Francisco J. Rosales, Eyleen L. K. Goh
Software Mentions: 1
Published: about 14 years ago

10.1371/journal.pone.0090597

GRK5 Intronic (CA)n Polymorphisms Associated with Type 2 Diabetes in Chinese Hainan Island
Cited by: 16
Author(s): Zuo‐Li Xia, Tubao Yang, Wang Zhuan-suo, Jing Dong, Liang Chen
Software Mentions: 1
Published: over 12 years ago

10.1038/s41418-019-0461-z

IGF2BP2 regulates DANCR by serving as an N6-methyladenosine reader
Cited by: 194
Author(s): Xiaoge Hu, Wan-Xin Peng, Huaixiang Zhou, Jiahong Jiang, Xinchun Zhou, Dongsheng Huang, Yin‐Yuan Mo, Liu Yang
Software Mentions: 1
Published: over 6 years ago

10.1016/j.devcel.2017.12.024

Cardiomyocytes Sense Matrix Rigidity through a Combination of Muscle and Non-muscle Myosin Contractions
Cited by: 100
Author(s): Pragati Pandey, William Hawkes, Junquiang Hu, William Megone, Julien E. Gautrot, Narayana Anilkumar, Min Zhang, L Hirvonen, Susan Cox, Elisabeth Ehler, James Hone, Michael P. Sheetz, Thomas Iskratsch
Software Mentions: 1
Published: over 8 years ago

10.3389/fmolb.2021.671865

SLC38A10 Transporter Plays a Role in Cell Survival Under Oxidative Stress and Glutamate Toxicity
Cited by: 8
Author(s): Rekha Tripathi, Tanya Aggarwal, Robert Fredriksson
Software Mentions: 1
Published: over 5 years ago

10.1038/srep13252

Virulence from vesicles: Novel mechanisms of host cell injury by Escherichia coli O104:H4 outbreak strain
Cited by: 120
Author(s): Lisa Kashima, Christian Rüter, Andreas Bauwens, Lilo Greune, Malte Glüder, Björn Kemper, Angelika Fruth, Sun Nyunt Wai, Xiaohua He, Roland Lloubès, M. Alexander Schmidt, Ulrich Dobrindt, Alexander Mellmann, Helge Karch, Martina Bielaszewska
Software Mentions: 1
Published: about 11 years ago

10.1038/s41598-019-56842-9

Development of a novel anti-hepatitis B virus agent via Sp1
Cited by: 6
Author(s): Michiyo Hayakawa, Hideaki Umeyama, Mitsuo Iwadate, Y-h. Taguchi, Yoshihiko Yano, Takashi Honda, Saori Itami-Matsumoto, Ritsuzo Kozuka, Masaru Enomoto, Akihiro Tamori, Norifumi Kawada, Yoshiki Murakami
Software Mentions: 1
Published: over 6 years ago

10.3390/s16010118

Defence against Black Hole and Selective Forwarding Attacks for Medical WSNs in the IoT
Cited by: 62
Author(s): Avijit Mathur, Thomas Newe, Muzaffar Rao
Software Mentions: 1
Published: over 10 years ago

10.1186/s43141-020-00087-x

Excavating the functionally crucial active-site residues of the DXS protein of Bacillus subtilis by exploring its closest homologues
Cited by: 1
Author(s): Ashish Runthala, Tavakala Harsha Sai, Vandana Kamjula, Suresh Chandra Phulara, Vikrant Singh Rajput, Karthikeyan Sangapillai
Software Mentions: 1
Published: almost 6 years ago

10.7554/eLife.63258

Extracellular matrix in multicellular aggregates acts as a pressure sensor controlling cell proliferation and motility
Cited by: 30
Author(s): Monika E. Dolega, Sylvain Monnier, Benjamin Brunel, Jean‐François Joanny, Pierre Recho, Giovanni Cappello
Software Mentions: 1
Published: over 5 years ago

10.1186/1471-2105-12-S14-S5

Integrative analysis workflow for the structural and functional classification of C-type lectins
Cited by: 17
Author(s): Geoffrey Koh, Ariana Low, Daren Poh, Yujian Yao, Say Kong Ng, Voon‐Kean Wong, Vincent Vagenende, Kong-Peng Lam, Dong-Yup Lee
Software Mentions: 1
Published: over 14 years ago

10.3897/BDJ.9.e65023

The Atlas of Living Australia: History, current state and future directions
Cited by: 17
Author(s): Lee Belbin, Elycia Wallis, Donald Hobern, André Zerger
Software Mentions: 1
Published: over 5 years ago

10.1186/s13072-019-0293-6

Crosstalk between chromatin structure, cohesin activity and transcription
Cited by: 17
Author(s): Douglas Maya-Miles, Eloísa Andújar, Mónica Pérez-Alegre, Marina Murillo-Pineda, Marta Barrientos-Moreno, María J. Cabello-Lobato, Elena Gómez-Marín, Macarena Morillo-Huesca, Félix Prado
Software Mentions: 1
Published: about 7 years ago

10.3389/fpsyt.2019.00927

Development of a Psychological Intervention to Address Anxiety During Pregnancy in a Low-Income Country
Cited by: 30
Author(s): Najia Atif, Huma Nazir, Shamsa Zafar, Rizwana Chaudhri, Maria Atiq, Luke C. Mullany, Armaan A. Rowther, Abid Malik, Pamela J. Surkan, Atıf Rahman
Software Mentions: 1
Published: over 6 years ago

10.1038/srep29895

Engineering Factor Xa Inhibitor with Multiple Platelet-Binding Sites Facilitates its Platelet Targeting
Cited by: 4
Author(s): Yuyan Zhu, Ruyi Li, Yuan Lin, Mengyang Shui, Xiaoyan Liu, Huan Chen
Software Mentions: 1
Published: about 10 years ago

10.1186/1742-4682-11-27

Herpes B virus gD interaction with its human receptor - an in silico analysis approach
Cited by: 4
Author(s): Lingke Li, Zheng-Liang Qiu, Yan Li, Feng Liang, Huahu Ye, Yongqin Cai, Wanfeng Guo, Yan Li, Junjie Yue
Software Mentions: 1
Published: about 12 years ago

10.1186/1476-072X-5-49

Cited by: 101
Author(s): Brad Bell, Richard Hoskins, Linda Williams Pickle, Daniel Wartenberg
Software Mentions: 1
Published: over 20 years ago

10.2196/jmir.3444

Finding Collaborators: Toward Interactive Discovery Tools for Research Network Systems
Cited by: 3
Author(s): Charles Borromeo, Titus Schleyer, Michael J. Becich, Harry Hochheiser
Software Mentions: 1
Published: almost 12 years ago

10.1186/s13099-019-0301-1

Determination of azithromycin heteroresistant Campylobacter jejuni in traveler’s diarrhea
Cited by: 3
Author(s): Woradee Lurchachaiwong, Supaporn Ruksasiri, Patcharawalai Wassanarungroj, Oralak Serichantalergs, Ladaporn Bodhidatta, John M. Crawford, Sanjaya Shrestha, Prativa Pandey
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.02963

A molecular model for the role of SYCP3 in meiotic chromosome organisation
Cited by: 106
Author(s): Johanna L Syrjänen, Luca Pellegrini, Owen R. Davies
Software Mentions: 1
Published: about 12 years ago

10.7759/cureus.5016

Effect of Intravenous Vitamin C, Thiamine, and Hydrocortisone (The Metabolic Resuscitation Protocol) on Early Weaning from Vasopressors in Patients with Septic Shock. A Descriptive Case Series Study
Cited by: 5
Author(s): Hassan Masood, Ahmed Mujadid Burki, Anum Sultan, Hina Sharif, Asim Ghauri, Sehrish Khan, Muhammad Shoaib Safdar Qureshi, Aayesha Qadeer, Ghulam Rasheed
Software Mentions: 1
Published: about 7 years ago

10.1186/s12883-019-1553-6

Malnutrition is common in children with cerebral palsy in Saudi Arabia – a cross-sectional clinical observational study
Cited by: 20
Author(s): Abdul Rahman Almuneef, Ali Almajwal, Iftikhar Alam, Mahmoud M. A. Abulmeaty, Bader Al Bader, Mohamed Farouq Badr, May N. Al-Muammar, Suhail Razak
Software Mentions: 1
Published: over 6 years ago

10.1186/1475-2875-12-287

Identification of piggyBac-mediated insertions in Plasmodium berghei by next generation sequencing
Cited by: 3
Author(s): Yi Cao, Bing Rui, Dianne Wellems, Mingxing Li, Biaobang Chen, Dongmei Zhang, Weiqing Pan
Software Mentions: 1
Published: about 13 years ago

10.3390/foods10030506

Glycemic Index of Gluten-Free Bread and Their Main Ingredients: A Systematic Review and Meta-Analysis
Cited by: 26
Author(s): Bernardo Romão, Ana Luísa Falcomer, Gabriela Palos, Sandra Cavalcante, Raquel Braz Assunção Botelho, Eduardo Yoshio Nakano, António Raposo, Faiyaz Shakeel, Sultan Alshehri, Wael A. Mahdi, Renata Puppin Zandonadi
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2016.00113

Economic Evaluation in Stratified Medicine: Methodological Issues and Challenges
Cited by: 10
Author(s): Hans-Joerg Fugel, Mark Nuijten, Maarten J. Postma, William K. Redekop
Software Mentions: 1
Published: over 10 years ago

10.3389/fsurg.2021.647792

Voice Assessment in Patients With Obstructive Sleep Apnea Syndrome After Transoral Robotic Surgery
Cited by: 1
Author(s): Hsin-Hsin Huang, Chien‐Han Tsao, James Cheng‐Chung Wei
Software Mentions: 1
Published: over 5 years ago

10.1111/1759-7714.13362

Evaluating the effectiveness of chemotherapy for thymic epithelial tumors using the CD‐DST method
Cited by: 5
Author(s): Lei Yu, Bao-Xun Zhang, Xin Du, Zhen Yu, Xingguo Yang, Yi Jiang
Software Mentions: 1
Published: over 6 years ago

10.1186/1752-0509-4-96

Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks
Cited by: 33
Author(s): David van Dijk, Gökhan Ertaylan, Charles A. Boucher, Peter M. A. Sloot
Software Mentions: 1
Published: about 16 years ago

10.1186/s12859-017-1658-0

A greedy alignment-free distance estimator for phylogenetic inference
Cited by: 28
Author(s): Sharma V. Thankachan, Sriram P. Chockalingam, Yongchao Liu, Ambujam Krishnan, Srinivas Aluru
Software Mentions: 1
Published: about 9 years ago

10.1186/s12864-015-1720-0

Horizontal gene transfer in an acid mine drainage microbial community
Cited by: 18
Author(s): Jiangtao Guo, Qi Wang, Xiaoqi Wang, Fumeng Wang, Jianming Yao, Huaiqiu Zhu
Software Mentions: 1
Published: about 11 years ago

10.1186/1471-2229-9-136

Proteins with an Euonymus lectin-like domain are ubiquitous in Embryophyta
Cited by: 34
Author(s): Elke Fouquaert, Willy J. Peumans, Tom Tm Vandekerckhove, Maté Ongenaert, Els J.M. Van Damme
Software Mentions: 1
Published: almost 17 years ago

10.1186/1745-6150-6-48

Sequence variability of Rhizobiales orthologs and relationship with physico-chemical characteristics of proteins
Cited by: 4
Author(s): Humberto Peralta, Gabriela Guerrero, Alejandro Aguilar, Jaime Mora
Software Mentions: 1
Published: almost 15 years ago

10.1186/1743-422X-4-76

An ectromelia virus profilin homolog interacts with cellular tropomyosin and viral A-type inclusion protein
Cited by: 10
Author(s): C. Butler-Cole, Mary J. Wagner, Melissa Da Silva, Gordon D. Brown, Robert D. Burke, Chris Upton
Software Mentions: 1
Published: about 19 years ago

10.1371/journal.pone.0013999

MPI-PHYLIP: Parallelizing Computationally Intensive Phylogenetic Analysis Routines for the Analysis of Large Protein Families
Cited by: 20
Author(s): Alexander J. Ropelewski, Hugh B. Nicholas, Ricardo R. Gonzalez Mendez
Software Mentions: 1
Published: almost 16 years ago

10.32598/bcn.9.10.120

Age of Acquisition Effect: Evidence from Single Word Reading and Neural Networks
Cited by: 2
Author(s): Ahmad Sohrabi
Software Mentions: 1
Published: almost 8 years ago

10.3390/ijerph18179304

Multiplicity Eludes Peer Review: The Case of COVID-19 Research
Cited by: 4
Author(s): Oliver Gutiérrez-Hernández, Luis V. García
Software Mentions: 1
Published: almost 5 years ago

10.2196/resprot.6674

Automated Adherence Reminders for High Risk Children With Asthma: A Research Protocol
Cited by: 10
Author(s): Stacy A Adams, Michelle Chan Leach, Chris Feudtner, Victoria A. Miller, Chén C. Kenyon
Software Mentions: 1
Published: over 9 years ago

10.3390/molecules26010239

Does Antibody Stabilize the Ligand Binding in GP120 of HIV-1 Envelope Protein? Evidence from MD Simulation
Cited by: 1
Author(s): Shalini Yadav, Vishnudatt Pandey, Rakesh Tiwari, Rajendra Prasad Ojha, Kshatresh Dutta Dubey
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pntd.0002088

Neopterin Is a Cerebrospinal Fluid Marker for Treatment Outcome Evaluation in Patients Affected by Trypanosoma brucei gambiense Sleeping Sickness
Cited by: 28
Author(s): Natalia Tiberti, Veerle Lejon, Alexandre Hainard, Bertrand Castro, Xavier Robin, Natacha Turck, Krister Kristensson, Enock Matovu, John Enyaru, Dieudonné Mumba Ngoyi, Sanjeev Krishna, Sylvie Bisser, Joseph Mathu Ndung U, Philippe Büscher, Jean‐Charles Sanchez
Software Mentions: 1
Published: over 13 years ago

10.3389/fmolb.2020.00170

Evidence for Disruption of Mg2+ Pair as a Resistance Mechanism Against HIV-1 Integrase Strand Transfer Inhibitors
Cited by: 1
Author(s): Lucas de Almeida Machado, Ana Carolina Ramos Guimarães
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.69482

The fluoride permeation pathway and anion recognition in Fluc family fluoride channels
Cited by: 5
Author(s): Benjamin McIlwain, Roja Gundepudi, B Ben Koff, Randy B. Stockbridge
Software Mentions: 1
Published: about 5 years ago

10.1186/s12859-018-2249-4

Detecting Succinylation sites from protein sequences using ensemble support vector machine
Cited by: 36
Author(s): Ning Qiao, Xiaosa Zhao, Lingling Bao, Zhiqiang Ma, Xiaowei Zhao
Software Mentions: 1
Published: about 8 years ago

10.1155/2014/623149

iSS-PseDNC: Identifying Splicing Sites Using Pseudo Dinucleotide Composition
Cited by: 111
Author(s): Wei Chen, Pengmian Feng, Hao Lin, Kuo‐Chen Chou
Software Mentions: 1
Published: over 12 years ago

10.1371/journal.pone.0105018

iNitro-Tyr: Prediction of Nitrotyrosine Sites in Proteins with General Pseudo Amino Acid Composition
Cited by: 173
Author(s): Yan Xu, Xin Wen, Lu Wen, Lingyun Wu, Ning Deng, Kuo‐Chen Chou
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0072234

iGPCR-Drug: A Web Server for Predicting Interaction between GPCRs and Drugs in Cellular Networking
Cited by: 103
Author(s): Xuan Xiao, Jianliang Min, Pu Wang, Kuo‐Chen Chou
Software Mentions: 1
Published: about 13 years ago

10.1038/s41598-019-49430-4

csDMA: an improved bioinformatics tool for identifying DNA 6 mA modifications via Chou’s 5-step rule
Cited by: 24
Author(s): Ze Liu, Wei Dong, Wei Jiang, Zhi Min He
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms15034915

iNR-Drug: Predicting the Interaction of Drugs with Nuclear Receptors in Cellular Networking
Cited by: 70
Author(s): Yue-Nong Fan, Xuan Xiao, Jianliang Min, Kuo‐Chen Chou
Software Mentions: 1
Published: over 12 years ago

10.1093/bioinformatics/btab270

DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction
Cited by: 39
Author(s): Ronghui You, Shuwei Yao, Hiroshi Mamitsuka, Shanfeng Zhu
Software Mentions: 1
Published: about 5 years ago

10.3389/fbioe.2015.00143

Tandem Repeats in Proteins: Prediction Algorithms and Biological Role
Cited by: 21
Author(s): Marco Pellegrini
Software Mentions: 1
Published: almost 11 years ago

10.1186/1471-2180-8-223

Characterization of the ompL1 gene of pathogenic Leptospira species in China and cross-immunogenicity of the OmpL1 protein
Cited by: 51
Author(s): Haiyan Dong, Ye Hu, Feng Xue, Dexter Sun, David M. Ojcius, Yafei Mao, Jie Yan
Software Mentions: 1
Published: over 17 years ago

10.1155/2009/947490

Characterization of the GeneBmEm4, a Homologue ofDrosophila E(spl)m4, from the Silkworm,Bombyx mori
Cited by: 4
Author(s): Fenghui Zeng, Xie Hong-Xia, Zhou Nie, Jian Chen, Zhengbing Lv, Jianqing Chen, Dan Wang, Li‐Li Liu, Wengong Yu, Qing Sheng, Xiang-Fu Wu, Yaozhou Zhang
Software Mentions: 1
Published: over 17 years ago

10.3389/fmicb.2016.00123

Eukaryotic-Type Ser/Thr Protein Kinase Mediated Phosphorylation of Mycobacterial Phosphodiesterase Affects its Localization to the Cell Wall
Cited by: 5
Author(s): Neha Malhotra, Pradip K. Chakraborti
Software Mentions: 1
Published: over 10 years ago

10.7717/peerj.8187

Benchmarking protocols for the metagenomic analysis of stream biofilm viromes
Cited by: 9
Author(s): Meriem Bekliz, Jade Brandani, Massimo Bourquin, Tom J. Battin, Hannes Peter
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0203679

Normative 3D opto-electronic stereo-photogrammetric sagittal alignment parameters in a young healthy adult population
Cited by: 11
Author(s): Edyta Kinel, Moreno D’Amico, Piero Roncoletta
Software Mentions: 1
Published: almost 8 years ago

10.1186/1471-2105-7-277

EVEREST: automatic identification and classification of protein domains in all protein sequences
Cited by: 31
Author(s): Elon Portugaly, Amir Harel, Michal Linial, Michal Linial
Software Mentions: 1
Published: about 20 years ago

10.1186/1471-2105-6-15

Cited by: 68
Author(s): Antje Krause, Jens Stoye, Martin Vingron
Software Mentions: 1
Published: over 21 years ago

10.1371/journal.pcbi.1008227

Few-shot learning for classification of novel macromolecular structures in cryo-electron tomograms
Cited by: 6
Author(s): Ran Li, Liangyong Yu, Bo Zhou, Xiangrui Zeng, Zhenyu Wang, Xin Yang, Jing Zhang, Xin Gao, Rui Jiang, Min Xu
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0058537

DendroBLAST: Approximate Phylogenetic Trees in the Absence of Multiple Sequence Alignments
Cited by: 44
Author(s): Steven Kelly, Philip K. Maini
Software Mentions: 1
Published: over 13 years ago

10.1371/journal.pone.0002247

Global Considerations in Hierarchical Clustering Reveal Meaningful Patterns in Data
Cited by: 17
Author(s): Roy Varshavsky, D. Horn, Michal Linial
Software Mentions: 1
Published: over 18 years ago

10.1155/2018/6813467

A Computational Approach Using Bioinformatics to Screening Drug Targets for<i> Leishmania infantum</i> Species
Cited by: 10
Author(s): Miguel Á. Chávez-Fumagalli, Mônica Santos Schneider, Daniela P. Lage, Grasiele de Sousa Vieira Tavares, Débora V.C. Mendonça, Thaís Teodoro de Oliveira Santos, Rodrigo Maia de Pádua, Ricardo Andrez Machado-de-Ávila, João Paulo Viana Leite, Eduardo Anton̂io Ferraz Coelho
Software Mentions: 1
Published: over 8 years ago

10.3390/ijms19010129

Small Myristoylated Protein-3, Identified as a Potential Virulence Factor in Leishmania amazonensis, Proves to be a Protective Antigen against Visceral Leishmaniasis
Cited by: 15
Author(s): Marcelo Pires-Oliveira, Vívian T. Martins, Thaís T.O. Santos, Daniela P. Lage, Fernanda F. Ramos, Beatriz C.S. Salles, Lourena E. Costa, Daniel Lucas Santos Dias, Patrícia A.F. Ribeiro, Mônica Santos Schneider, Ricardo Andrez Machado-de-Ávila, Antônio Lúcio Teixeira, Eduardo Anton̂io Ferraz Coelho, Miguel Á. Chávez-Fumagalli
Software Mentions: 1
Published: over 8 years ago

10.3390/s16020172

Mobility-Enhanced Reliable Geographical Forwarding in Cognitive Radio Sensor Networks
Cited by: 6
Author(s): Suleiman Zubair, Sharifah Kamilah Syed Yusoff, Norsheila Fisal
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pntd.0008924

Enhancing fine-grained intra-urban dengue forecasting by integrating spatial interactions of human movements between urban regions
Cited by: 7
Author(s): Kang Liu, Meng Zhang, Guikai Xi, Aiping Deng, Tie Song, Qinglan Li, Min Kang, Ling Yin
Software Mentions: 1
Published: over 5 years ago

10.3390/cells9051110

Targeting GSK3 and Associated Signaling Pathways Involved in Cancer
Cited by: 123
Author(s): Przemysław Duda, Shaw M. Akula, Stephen L. Abrams, Linda S. Steelman, Alberto M. Martelli, Lucio Cocco, Stefano Ratti, Saverio Candido, Massimo Libra, Giuseppe Montalto, Melchiorre Cervello, Agnieszka Gizak, Dariusz Rakus, James A. McCubrey
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2148-8-286

The Bet v 1 fold: an ancient, versatile scaffold for binding of large, hydrophobic ligands
Cited by: 235
Author(s): Christian Radauer, Peter Lackner, Heimo Breiteneder
Software Mentions: 1
Published: over 18 years ago

10.1371/journal.pone.0161856

Control Strategies for the DAB Based PV Interface System
Cited by: 16
Author(s): Hadi M. Elhelw, Mohamed Al-Hasheem, Mostafa I. Marei
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0123802

Optimal Placement of Unified Power Flow Controllers to Improve Dynamic Voltage Stability Using Power System Variable Based Voltage Stability Indices
Cited by: 20
Author(s): Fadi M. Albatsh, Shameem Ahmad, Saad Mekhilef, Hazlie Mokhlis, Mohamed Hassan
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.pone.0219320

New principle for busbar protection based on the Euclidean distance algorithm
Cited by: 3
Author(s): Xingxing Dong, Qian Peng, Hao Wu, Zhengwei Chang, Yinggao Yue, Yi Fan Zeng
Software Mentions: 1
Published: about 7 years ago

10.3390/e20060421

Entropy SVM–Based Recognition of Transient Surges in HVDC Transmissions
Cited by: 2
Author(s): Guangzhao Luo, Changyuan Yao, Yinglin Liu, Yonghong Tan, Jinghan He
Software Mentions: 1
Published: about 8 years ago

10.1186/1471-2105-6-295

PSE: A tool for browsing a large amount of MEDLINE/PubMed abstracts with gene names and common words as the keywords
Cited by: 4
Author(s): Takashi Yoneya
Software Mentions: 1
Published: over 20 years ago

10.3390/molecules25020385

Probabilistic Approach for Virtual Screening Based on Multiple Pharmacophores
Cited by: 4
Author(s): Timur Madzhidov, Assima Rakhimbekova, Alina Kutlushuna, Pavel Polishchuk
Software Mentions: 1
Published: over 6 years ago

10.1186/gb-2007-8-10-r223

Comparative genomic analysis of fungal genomes reveals intron-rich ancestors
Cited by: 119
Author(s): Jason E. Stajich, Fred S. Dietrich, Scott William Roy
Software Mentions: 1
Published: over 19 years ago

10.1107/S1744309110037619

Structure of a tryptophanyl-tRNA synthetase containing an iron–sulfur cluster
Cited by: 18
Author(s): Gye Won Han, Xiang‐Lei Yang, Daniel McMullan, Yeeting E. Chong, S. Sri Krishna, Christopher L. Rife, Dana Weekes, Scott M. Brittain, Polat Abdubek, Eileen Ambing, Tamara Astakhova, Herbert L. Axelrod, Dennis Carlton, J.M. Caruthers, Hsiu Ju Chiu, Thomas Clayton, Lian Duan, Julie Feuerhelm, Joanna C Grant, Slawomir K. Grzechnik, Lukasz Jaroszewski, Kevin K. Jin, Heath E. Klock, Mark W. Knuth, Abhinav Kumar, David Marciano, Mitchell D. Miller, Andrew Morse, Edward Nigoghossian, Linda Okach, Jessica Paulsen, Ron Reyes, H. van den Bedem, Aprilfawn White, Guenter Wolf, Qingping Xu, Keith O. Hodgson, John Wooley, Ashley M. Deacon, Adam Godzik, Scott A. Lesley, Marc‐André Elsliger, Paul Schimmel, Ian A. Wilson
Software Mentions: 1
Published: almost 16 years ago

10.3390/antibiotics8030112

Antibiofilm Activity of Three Different Irrigation Techniques: An in Vitro Study
Cited by: 15
Author(s): Caterina Eneide, Raffaella Castagnola, Cécilia Martini, Nicola M. Grande, Francesca Bugli, Romeo Patini, Massimo Cordaro, Maurizio Sanguinetti, Giovanni Olivi, Gaetano Isola, Luca Marigo
Software Mentions: 1
Published: about 7 years ago

10.1186/1471-2105-9-S12-S12

Real value prediction of protein solvent accessibility using enhanced PSSM features
Cited by: 26
Author(s): Darby Tien Hao Chang, Hsuan Yu Huang, Yu Tang Syu, Chih Peng Wu
Software Mentions: 1
Published: over 17 years ago

10.1186/s12859-017-1686-9

Simple adjustment of the sequence weight algorithm remarkably enhances PSI-BLAST performance
Cited by: 21
Author(s): Tsuneo Oda, Kyungtaek Lim, Kentaro Tomii
Software Mentions: 1
Published: about 9 years ago

10.1186/s12859-015-0851-2

PredRSA: a gradient boosted regression trees approach for predicting protein solvent accessibility
Cited by: 37
Author(s): Chao Fan, Diwei Liu, Rui Huang, Zhigang Chen, Lei Deng
Software Mentions: 1
Published: over 10 years ago

10.1186/1471-2105-7-68

Prediction of protein continuum secondary structure with probabilistic models based on NMR solved structures
Cited by: 21
Author(s): Mikael Bodén, Yawen Zheng, Timothy L. Bailey
Software Mentions: 1
Published: over 20 years ago

10.1186/1471-2148-4-26

Cited by: 10
Author(s): Sachiko Matsutani
Software Mentions: 1
Published: over 22 years ago

10.1186/1471-2148-7-29

Control systems for membrane fusion in the ancestral eukaryote; evolution of tethering complexes and SM proteins
Cited by: 189
Author(s): Vassiliki Lila Koumandou, Joel B. Dacks, Richard M. R. Coulson, Mark C. Field
Software Mentions: 1
Published: over 19 years ago

10.1186/1471-2148-9-36

Recurring cluster and operon assembly for Phenylacetate degradation genes
Cited by: 25
Author(s): Fergal J. Martin, James O. McInerney
Software Mentions: 1
Published: over 17 years ago