10.1007/s00018-019-03165-7

MiR-17 and miR-19 cooperatively promote skeletal muscle cell differentiation
Cited by: 36
Author(s): Delin Kong, Mei He, Lin Yang, Rongtao Zhou, Yunjun Yan, Liang Yang, Chun‐Bo Teng
Software Mentions: 1
Published: about 7 years ago

10.1242/bio.058678

Specificity and off-target effects of AAV8-TBG viral vectors for the manipulation of hepatocellular gene expression in mice
Cited by: 18
Author(s): Christos Kiourtis, Ania Wilczynska, Colin Nixon, William Clark, Stephanie May, Tom Bird
Software Mentions: 1
Published: almost 5 years ago

10.1242/bio.038281

Transcriptomic analyses highlight the likely metabolic consequences of colonization of a cnidarian host by native or non-native <i>Symbiodinium</i> species
Cited by: 17
Author(s): Ming-Chuan Lin, Shunichi Takahashi, Sylvain Forêt, Simon K. Davy, David J. Miller
Software Mentions: 1
Published: over 7 years ago

10.1242/bio.058528

Cex1 is a component of the COPI intracellular trafficking machinery
Cited by: 0
Author(s): Ludovic Enkler, Bruno Rinaldi, Johan-Owen De Craene, Philippe Hammann, Osamu Nureki, Bruno Senger, Sylvie Friant, Hubert Dominique Becker
Software Mentions: 1
Published: over 5 years ago

10.1155/2009/101382

Agent-Oriented Privacy-Based Information Brokering Architecture for Healthcare Environments
Cited by: 2
Author(s): Abdulmutalib Masaud-Wahaishi, Hamada Ghenniwa
Software Mentions: 1
Published: over 17 years ago

10.18632/oncotarget.14042

Genome-wide methylation sequencing of paired primary and metastatic cell lines identifies common DNA methylation changes and a role for EBF3 as a candidate epigenetic driver of melanoma metastasis
Cited by: 51
Author(s): Aniruddha Chatterjee, Peter A. Stockwell, Antonio Ahn, Euan J. Rodger, Anna L. Leichter, Michael R. Eccles
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2019.00656

Archaeorhizomycetes Spatial Distribution in Soils Along Wide Elevational and Environmental Gradients Reveal Co-abundance Patterns With Other Fungal Saprobes and Potential Weathering Capacities
Cited by: 27
Author(s): Eric Pinto‐Figueroa, Emily Seddon, Erika Yashiro, Aline Buri, Hélène Niculita‐Hirzel, Jan Roelof van der Meer, Antoine Guisan
Software Mentions: 1
Published: over 7 years ago

10.3390/s16030403

Next Generation Air Quality Platform: Openness and Interoperability for the Internet of Things
Cited by: 49
Author(s): Alexander Kotsev, Sven Schade, Massimo Craglia, Michel Gerboles, Laurent Spinelle, Marco Signorini
Software Mentions: 1
Published: over 10 years ago

10.26508/lsa.201800036

Serine catabolism is essential to maintain mitochondrial respiration in mammalian cells
Cited by: 53
Author(s): Stéphanie Lucas, Guohua Chen, Siddhesh Aras, Jian Wang
Software Mentions: 1
Published: over 8 years ago

10.1007/s00018-021-03880-0

Stromal interaction molecule 1 (STIM1) knock down attenuates invasion and proliferation and enhances the expression of thyroid-specific proteins in human follicular thyroid cancer cells
Cited by: 7
Author(s): Muhammad Asghar, Taru Lassila, Ilkka Paatero, Van Dien Nguyen, Pauliina Kronqvist, Jixi Zhang, Anna Slita, Christoffer Löf, You Zhou, Jessica M. Rosenholm, Kid Törnquist
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.571913

Complex Internal Microstructure of Feather Follicles on Chicken Skin Promotes the Bacterial Cross-Contamination of Carcasses During the Slaughtering Process
Cited by: 8
Author(s): Xibin Zhang, Zong‐Gen Peng, Peng Li, Yanwei Mao, Ru Shen, Rui Tao, Diao Xiu-guo, Longhai Liu, Yuzhong Zhao, Xin Luo
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmicb.2019.01670

Structural Basis of the Subcellular Topology Landscape of Escherichia coli
Cited by: 22
Author(s): Maria S Loos, Reshmi Ramakrishnan, Wim Vranken, Alexandra Tsirigotaki, Evrydiki-Pandora Tsare, Valentina Zorzini, Jozefien De Geyter, Biao Yuan, Ioannis Tsamardinos, Maria Klappa, Joost Schymkowitz, Frédéric Rousseau, Spyridoula Karamanou, Anastassios Economou
Software Mentions: 1
Published: about 7 years ago

10.1038/s41423-021-00636-5

Placenta-derived IL-32β activates neutrophils to promote preeclampsia development
Cited by: 11
Author(s): Dan Liú, Qiang Li, Hailin Ding, Guangfeng Zhao, Zhiyin Wang, Chenrui Cao, Yimin Dai, Mingming Zheng, Xiangyu Zhu, Qianwen Wu, Ya Wang, Honglei Duan, Hanfei Tang, Xianyan Lu, Yayi Hou, Yali Hu
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms22189901

RFCM-PALM: In-Silico Prediction of S-Palmitoylation Sites in the Synaptic Proteins for Male/Female Mouse Data
Cited by: 2
Author(s): Soumyendu Sekhar Bandyopadhyay, Anup Kumar Halder, Monika Zaręba-Kozioł, Anna Bartkowiak-Kaczmarek, Aviinandaan Dutta, Piyali Chatterjee, Mita Nasipuri, T. Wójtowicz, Jakub Włodarczyk, Subhadip Basu
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2018.02225

Detection of Viral Pathogens With Multiplex Nanopore MinION Sequencing: Be Careful With Cross-Talk
Cited by: 53
Author(s): Yifei Xu, Kuiama Lewandowski, Sheila F Lumley, Steven T. Pullan, Richard Vipond, Miles W. Carroll, Dona Foster, Philippa C. Matthews, Timothy Ea Peto, Derrick W. Crook
Software Mentions: 1
Published: almost 8 years ago

10.26508/lsa.202000651

The transcriptional landscape analysis of basal cell carcinomas reveals novel signalling pathways and actionable targets
Cited by: 10
Author(s): Ivan V. Litvinov, Pingxing Xie, Scott R. Gunn, Denis Sasseville, Philippe Lefrançois
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00386

Mycobiome of Cysts of the Soybean Cyst Nematode Under Long Term Crop Rotation
Cited by: 34
Author(s): Weiming Hu, Noah Strom, Deepak Haarith, Senyu Chen, Kathryn E. Bushley
Software Mentions: 1
Published: over 8 years ago

10.1007/s00408-019-00257-w

Growth Hormone-Releasing Hormone Receptor Antagonist Modulates Lung Inflammation and Fibrosis due to Bleomycin
Cited by: 29
Author(s): Chongxu Zhang, Renzhi Cai, Aaron Lazerson, Gaëtan J.-R. Delcroix, Medhi Wangpaichitr, Mehdi Mirsaeidi, Anthony J. Griswold, Andrew V. Schally, Robert M. Jackson
Software Mentions: 1
Published: about 7 years ago

10.3389/fmicb.2021.645174

Cellulolytic and Xylanolytic Microbial Communities Associated With Lignocellulose-Rich Wheat Straw Degradation in Anaerobic Digestion
Cited by: 16
Author(s): Marina Bergen Jensen, Nadieh de Jonge, Maja Duus Dolriis, Caroline Kragelund, Christian Holst Fischer, Martin Rosenørn Eskesen, Karoline Noer, Henrik Bjarne Møller, Lars Ditlev Mørck Ottosen, Jeppe Lund Nielsen, Michael Vedel Wegener Kofoed
Software Mentions: 1
Published: over 5 years ago

10.1155/2020/4623107

Global Transcriptional Profiling Reveals Novel Autocrine Functions of Interleukin 6 in Human Vascular Endothelial Cells
Cited by: 8
Author(s): Liza U. Ljungberg, Mulugeta M. Zegeye, Caroline Kardeby, Knut Fälker, Dirk Repsilber, Allan Sirsjö
Software Mentions: 1
Published: over 6 years ago

10.3390/s19235303

A Comparison of the Influence of Vegetation Cover on the Precision of an UAV 3D Model and Ground Measurement Data for Archaeological Investigations: A Case Study of the Lepelionys Mound, Middle Lithuania
Cited by: 3
Author(s): Algimantas Česnulevičius, Artūras Bautrėnas, Linas Bevainis, Donatas Ovodas
Software Mentions: 1
Published: over 6 years ago

10.3389/fmicb.2020.593589

How do Planktonic Particle Collection Methods Affect Bacterial Diversity Estimates and Community Composition in Oligo-, Meso- and Eutrophic Lakes?
Cited by: 9
Author(s): Guobo Xie, Xiangming Tang, Yi Gong, Kwang‐Tsao Shao, Guang Gao
Software Mentions: 1
Published: over 5 years ago

10.1016/j.jcmgh.2020.09.014

Inducible Deletion of YAP and TAZ in Adult Mouse Smooth Muscle Causes Rapid and Lethal Colonic Pseudo-Obstruction
Cited by: 11
Author(s): Fatima Daoud, Johan Holmberg, Azra Alajbegović, Mario Grossi, Catarina Rippe, Karl Swärd, Sebastian Albinsson
Software Mentions: 1
Published: over 5 years ago

10.3390/metabo9110268

Study of the Differentially Expressed Genes in the Pomacea canaliculata Transcriptome after Treatment with Pedunsaponin A
Cited by: 2
Author(s): Yang Chun-ping, Tianxing Lv, Yangyang Zhang, Bin Wang, Xuefei Zhao, Min Zhang, Guoshu Gong, Xiaoli Chang, Guizhou Yue, Xiaoyan Qiu, Li Luo, Huabao Chen
Software Mentions: 1
Published: almost 7 years ago

10.1186/s11658-021-00285-6

Comprehensive RNA sequencing in primary murine keratinocytes and fibroblasts identifies novel biomarkers and provides potential therapeutic targets for skin-related diseases
Cited by: 7
Author(s): Tiancheng Wang, Zhenwei Zhou, Enjing Luo, Jinghong Zhong, Daqing Zhao, Haisi Dong, Baojin Yao
Software Mentions: 1
Published: almost 5 years ago

10.3389/fmicb.2021.624980

Seasonal Variation in Viral Infection Rates and Cell Sizes of Infected Prokaryotes in a Large and Deep Freshwater Lake (Lake Biwa, Japan)
Cited by: 4
Author(s): Shang Shen, Yoshihisa Shimizu
Software Mentions: 1
Published: over 5 years ago

10.1016/j.stemcr.2017.05.027

Nuclear Factor Erythroid 2 Regulates Human HSC Self-Renewal and T Cell Differentiation by Preventing NOTCH1 Activation
Cited by: 14
Author(s): Alessandro Di Tullio, Diana Passaro, Kevin Rouault-Pierre, Sukhveer Purewal, Dominique Bonnet
Software Mentions: 1
Published: about 9 years ago

10.1186/s12934-021-01603-5

Site-directed mutagenesis of the quorum-sensing transcriptional regulator SinR affects the biosynthesis of menaquinone in Bacillus subtilis
Cited by: 10
Author(s): Jiang Wu, Wei Li, Su Zhao, Qian Senhe, Wang Zhou, Mengjie Zhou, Wenchao Hu, Jian Wang, Liu-xiu Hu, Yan Liu, Zhenglian Xue
Software Mentions: 1
Published: about 5 years ago

10.1016/j.chom.2018.04.013

The Bicarbonate Transporter SLC4A7 Plays a Key Role in Macrophage Phagosome Acidification
Cited by: 61
Author(s): Vitaly Sedlyarov, Ruth Eichner, Enrico Gottardi, Patrick Essletzbichler, Ulrich Goldmann, Paula Nunes-Hasler, Ismet Srndic, Anna Moskovskich, Leonhard X. Heinz, Felix Kartnig, Johannes W. Bigenzahn, Manuele Rebsamen, Pavel Kovarik, Nicolas Demaurex, Giulio Superti‐Furga
Software Mentions: 1
Published: about 8 years ago

10.1186/s12934-020-01503-0

Effect of overexpression of SNF1 on the transcriptional and metabolic landscape of baker’s yeast under freezing stress
Cited by: 10
Author(s): Meng Kai Lü, Yang Xu, Xue Lin, Huan-Yuan Jiang, Xiaoping Hu, Sixin Liu
Software Mentions: 1
Published: over 5 years ago

10.1016/j.chom.2017.04.004

A Rab20-Dependent Membrane Trafficking Pathway Controls M. tuberculosis Replication by Regulating Phagosome Spaciousness and Integrity
Cited by: 70
Author(s): Laura Schnettger, Angela Rodgers, Urška Repnik, Rachel Lai, Gang Pei, Martijn Verdoes, Robert J. Wilkinson, Douglas Young, Maximiliano G. Gutiérrez
Software Mentions: 1
Published: over 9 years ago

10.3389/fmicb.2019.02966

Potential TMA-Producing Bacteria Are Ubiquitously Found in Mammalia
Cited by: 63
Author(s): Silke Rath, Tatjana Rud, Dietmar H. Pieper, Marius Vital
Software Mentions: 1
Published: over 6 years ago

10.1002/stem.2241

Transient Canonical Wnt Stimulation Enriches Human Bone Marrow Mononuclear Cell Isolates for Osteoprogenitors
Cited by: 14
Author(s): Agnieszka Janeczek, Rahul S. Tare, Edoardo Scarpa, Inés Moreno-Jiménez, Caroline A. Rowland, Dominic C. Jenner, Tracey A. Newman, Richard O.C. Oreffo, Nicholas D. Evans
Software Mentions: 1
Published: almost 11 years ago

10.1002/mbo3.836

Metabolic comparison of aerial and submerged mycelia formed in the liquid surface culture of <i>Cordyceps militaris</i>
Cited by: 14
Author(s): Ahmad Suparmin, Tatsuya Kato, Hiroyuki Takemoto, Enoch Y. Park
Software Mentions: 1
Published: over 7 years ago

10.1038/s41398-020-01113-9

Amyloid-beta uptake by blood monocytes is reduced with ageing and Alzheimer’s disease
Cited by: 34
Author(s): Sihan Chen, Ding-Yuan Tian, Yujie Shen, Yuan Cheng, Dong-Yu Fan, Hao‐Lun Sun, Chenyang He, Pu‐Yang Sun, Xian‐Le Bu, Fan Zeng, Juan Liu, Juan Deng, Zhiqiang Xu, Chen Yang, Yan‐Jiang Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fmicb.2018.00405

Metabolic Adaptation of Methanogens in Anaerobic Digesters Upon Trace Element Limitation
Cited by: 47
Author(s): Babett Wintsche, Nico Jehmlich, Denny Popp, Hauke Harms, Sabine Kleinsteuber
Software Mentions: 1
Published: over 8 years ago

10.1038/s41421-020-0183-x

A bioenergetic shift is required for spermatogonial differentiation
Cited by: 19
Author(s): Wei Chen, Zhaoran Zhang, Che-Jung Chang, Zhongyue Yang, Pengxiang Wang, Haihui Fu, Wei Xiao, Eric Chen, Suxu Tan, Wen Huang, Liangliang Sun, Ting Ni, Yi Yang, Yuan Wang
Software Mentions: 1
Published: about 6 years ago

10.1038/s41421-021-00291-0

Autologous transplantation of thecal stem cells restores ovarian function in nonhuman primates
Cited by: 8
Author(s): Hong Chen, Kai Xia, Weijun Huang, Huijian Li, Chao Wang, Yuanchen Ma, Jianhui Chen, Peng Luo, Shuwei Zheng, Jiancheng Wang, Yichuan Wang, Dong Lin, Zhipeng Tan, Xiaomin Lai, Frank Fuxiang Mao, Weiqiang Li, Xiaoyan Liang, Tao Wang, Andy Peng Xiang, Ke Qin
Software Mentions: 1
Published: almost 5 years ago

10.1186/s13063-017-2064-7

Collaborative care for depression in general practice: study protocol for a randomised controlled trial
Cited by: 7
Author(s): Ursula Ødum Brinck-Claussen, Nadja Kehler Curth, Annette Sofie Davidsen, John Hagel Mikkelsen, Marianne Engelbrecht Lau, Merete Lundsteen, Clàudio Csillag, Kaj Sparle Christensen, Carsten Hjorthøj, Merete Nordentoft, Lene Falgaard Eplov
Software Mentions: 1
Published: about 9 years ago

10.1186/s13063-017-2172-4

TAILOR – tapered discontinuation versus maintenance therapy of antipsychotic medication in patients with newly diagnosed schizophrenia or persistent delusional disorder in remission of psychotic symptoms: study protocol for a randomized clinical trial
Cited by: 26
Author(s): Anne Emilie Stürup, Henning Tarp Jensen, Signe Dolmer, Merete Birk, Nikolai Albert, M D Johannes Nielsen, Carsten Hjorthøj, Lene Falgaard Eplov, Bjørn H Ebdrup, Ole Mors, Merete Nordentoft
Software Mentions: 1
Published: almost 9 years ago

10.1186/s40168-020-00888-9

Gut microbiome composition differences among breeds impact feed efficiency in swine
Cited by: 91
Author(s): Matteo Bergamaschi, Francesco Tiezzi, Jeremy Howard, Yongjun Huang, Kent Gray, Constantino Schillebeeckx, Nathan P. McNulty, Christian Maltecca
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pgen.1005295

Non-reciprocal Interspecies Hybridization Barriers in the Capsella Genus Are Established in the Endosperm
Cited by: 83
Author(s): Carolin A. Rebernig, Clément Lafon‐Placette, Marcelinus Rocky Hatorangan, Tanja Slotte, Claudia Köhler
Software Mentions: 1
Published: about 11 years ago

10.1038/s41420-021-00508-x

ETV4 promotes breast cancer cell stemness by activating glycolysis and CXCR4-mediated sonic Hedgehog signaling
Cited by: 24
Author(s): Tao Zhu, Jinsen Zheng, Wei Zhuo, Pinhua Pan, Min Li, Wei Zhang, Hong‐Hao Zhou, Yang Gao, Xi Li, Zhao‐Qian Liu
Software Mentions: 1
Published: over 5 years ago

10.1515/med-2020-0190

Identification of four genes associated with cutaneous metastatic melanoma
Cited by: 7
Author(s): Ji Chen, Yuming Li, Kai Yang, Yumei Gao, Yan Sha, Dong Xiao, Xiaohong Liang, Zhongqin Cheng
Software Mentions: 1
Published: over 6 years ago

10.1186/s40168-021-01051-8

Temporal patterns in Ixodes ricinus microbial communities: an insight into tick-borne microbe interactions
Cited by: 34
Author(s): Emilie Lejal, Julien Chiquet, Julie Aubert, Stéphanie Robin, Agustín Estrada‐Peña, Olivier Rué, Cédric Midoux, Mahendra Mariadassou, Xavier Bailly, Arnaud Cougoul, Patrick Gasqui, Jean-François Cosson, Karine Chalvet‐Monfray, Muriel Vayssier‐Taussat, Thomas V. Pollet
Software Mentions: 1
Published: about 5 years ago

10.1038/s41420-020-00397-6

A longitudinal study defined circulating microRNAs as reliable biomarkers for disease prognosis and progression in ALS human patients
Cited by: 26
Author(s): Gabriella Dobrowolny, Julie Martone, Elisa Lepore, Irene Casola, Antonio Petrucci, Maurizio Inghilleri, Mariangela Morlando, Alessio Colantoni, Bianca Maria Scicchitano, Andrea Calvo, Giulia Bisogni, Adriano Chiò, Mario Sabatelli, Irene Bozzoni, Antonio Musarò
Software Mentions: 1
Published: over 5 years ago

10.18632/oncotarget.22789

Detection of prognostic methylation markers by methylC-capture sequencing in acute myeloid leukemia
Cited by: 9
Author(s): Yan Li, Hongmei Zhao, Qingyu Xu, Na Lv, Jie Yu, Lili Wang, Xiaowen Wang, Jing Guo, Lei Zhou, Jing Liu, Guofeng Chen, Chongjian Chen, Yonghui Li, Li Yu
Software Mentions: 1
Published: over 8 years ago

10.3389/fmicb.2021.716523

Evaluation of the Antibacterial Activity of Crude Extracts Obtained From Cultivation of Native Endophytic Fungi Belonging to a Tropical Montane Rainforest in Colombia
Cited by: 11
Author(s): Esteban Charria-Girón, María C. Espinosa, Andrea Zapata-Montoya, María José Soto Méndéz, Juan P. Caicedo, Andrés F. Dávalos, Beatriz E. Ferro, Aída M. Vasco-Palacios, Nelson Caicedo
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms22168958

iBitter-Fuse: A Novel Sequence-Based Bitter Peptide Predictor by Fusing Multi-View Features
Cited by: 23
Author(s): Phasit Charoenkwan, Chanin Nantasenamat, Md. Mehedi Hasan, Mohammad Ali Moni, Píetro Lió, Watshara Shoombuatong
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms22083944

AKT Inhibitors: The Road Ahead to Computational Modeling-Guided Discovery
Cited by: 11
Author(s): Amit Kumar Halder, M. Natália D. S. Cordeiro
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms8071020

Composted Sewage Sludge Influences the Microbiome and Persistence of Human Pathogens in Soil
Cited by: 16
Author(s): Nikola Major, Jasper Schierstaedt, Sven Jechalke, Joseph Nesme, Smiljana Goreta Ban, Marko Černe, Søren J. Sørensen, Dean Ban, Adam Schikora
Software Mentions: 1
Published: about 6 years ago

10.1038/s41420-020-00396-7

Histone demethylase KDM5A promotes tumorigenesis of osteosarcoma tumor
Cited by: 10
Author(s): Daohu Peng, Birong Lin, Mingzhong Xie, Ping Zhang, Qiqiang Guo, Qian Li, Qinwen Gu, Sijin Yang, Sen Li
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms5010003

Using Network Extracted Ontologies to Identify Novel Genes with Roles in Appressorium Development in the Rice Blast Fungus Magnaporthe oryzae
Cited by: 8
Author(s): Ryan M. Ames
Software Mentions: 1
Published: over 9 years ago

10.1038/s41419-021-03654-3

Synergistic effect of the TLR5 agonist CBLB502 and its downstream effector IL-22 against liver injury
Cited by: 9
Author(s): Nicolas Melin, Daniel Sánchez-Taltavull, René Fahrner, Adrian Keogh, Michel Dosch, Isabel Büchi, Yitzhak Zimmer, Michaela Medová, Guido Beldi, Daniel M. Aebersold, Daniel Candinas, Deborah Stroka
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9081560

Transcriptome Analysis of Durusdinium Associated with the Transition from Free-Living to Symbiotic
Cited by: 3
Author(s): Ikuko Yuyama, Naoto Ugawa, Takeji Hashimoto
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9051065

Deletion of the PA4427-PA4431 Operon of Pseudomonas aeruginosa PAO1 Increased Antibiotics Resistance and Reduced Virulence and Pathogenicity by Affecting Quorum Sensing and Iron Uptake
Cited by: 1
Author(s): Liuhong Shen, Lang Gao, Mengjiao Yang, Jian Zhang, Yulu Wang, Yongdong Feng, Liping Wang, Shiwei Wang
Software Mentions: 1
Published: over 5 years ago

10.1186/s12889-018-6282-z

Causes of death and predictors of childhood mortality in Rwanda: a matched case-control study using verbal social autopsy
Cited by: 17
Author(s): Neil Gupta, Lisa R. Hirschhorn, Felix Cyamatare Rwabukwisi, Peter Drobac, Félix Sayinzoga, Cathy Mugeni, Fulgence Nkikabahizi, Tatien Bucyana, Hema Magge, Daniel M. Kagabo, Evrard Nahimana, Dominique M. Rouleau, Amelia VanderZanden, Megan Murray, Cheryl Amoroso
Software Mentions: 1
Published: over 7 years ago

10.3390/microorganisms7120634

Transcriptomic Analysis of Viable but Non-Culturable Escherichia coli O157:H7 Formation Induced by Low Temperature
Cited by: 16
Author(s): Junliang Zhong, Xihong Zhao
Software Mentions: 1
Published: over 6 years ago

10.1038/s41419-021-04018-7

The regulation of ferroptosis by MESH1 through the activation of the integrative stress response
Cited by: 19
Author(s): Chao-Chieh Lin, Chien‐Kuang Cornelia Ding, Tianai Sun, Jianli Wu, Kai-Yuan Chen, Pei Zhou, Jen-Tsan Chi
Software Mentions: 1
Published: about 5 years ago

10.3390/microorganisms9030652

In-Situ Metatranscriptomic Analyses Reveal the Metabolic Flexibility of the Thermophilic Anoxygenic Photosynthetic Bacterium Chloroflexus aggregans in a Hot Spring Cyanobacteria-Dominated Microbial Mat
Cited by: 11
Author(s): Shigeru Kawai, Joval N. Martinez, Mads Lichtenberg, Erik Trampe, Michael Kühl, Marcus Tank, Shin Haruta, Arisa Nishihara, Satoshi Hanada, Vera Thiel
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pntd.0005527

A third generation vaccine for human visceral leishmaniasis and post kala azar dermal leishmaniasis: First-in-human trial of ChAd63-KH
Cited by: 101
Author(s): Mohamed Osman, Anoop Mistry, Ada Keding, Rhian Gabe, Liz Cook, Sarah Forrester, Rebecca Wiggins, Stefania Di Marco, Stefano Colloca, Loredana Siani, Riccardo Cortese, Deborah F. Smith, Toni Aebischer, Paul M. Kaye, Charles Lacey
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pntd.0005691

Effect of praziquantel on the differential expression of mouse hepatic genes and parasite ATP binding cassette transporter gene family members during Schistosoma mansoni infection
Cited by: 17
Author(s): Melissa C. Sanchez, Katina V. Krasnec, Amalia S. Parra, Christian von Cabanlong, Geoffrey N. Gobert, Boris Umylny, Pauline M. Cupit, Charles Cunningham
Software Mentions: 1
Published: about 9 years ago

10.3389/fphar.2020.01036

Kuijieyuan Decoction Improved Intestinal Barrier Injury of Ulcerative Colitis by Affecting TLR4-Dependent PI3K/AKT/NF-κB Oxidative and Inflammatory Signaling and Gut Microbiota
Cited by: 69
Author(s): Baohai Liu, Xuehua Piao, Wei Niu, Qingyu Zhang, Chi Ma, Tong Wu, QiChang Gu, Tingfang Cui, Shuangdi Li
Software Mentions: 1
Published: about 6 years ago

10.3389/fphar.2019.01508

Combined Use of Astragalus Polysaccharide and Berberine Attenuates Insulin Resistance in IR-HepG2 Cells via Regulation of the Gluconeogenesis Signaling Pathway
Cited by: 19
Author(s): Zhu Mao, Min Lin, Xin Zhang, Lu Ping Qin
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2021.626766

A Review of the Dose Justification of Phase 3 Trials to Regulatory Authorities for Drugs Intended for the Treatment of Type 2 Diabetes in Europe
Cited by: 0
Author(s): Jeroen V. Koomen, Jasper Stevens, Margje H. Monster‐Simons, Hiddo J.L. Heerspink, Peter G. M. Mol
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pntd.0004634

Analysis on Gene Expression Profile in Oncospheres and Early Stage Metacestodes from Echinococcus multilocularis
Cited by: 28
Author(s): Fuqiang Huang, Zhisheng Dang, Yutaka Suzuki, T Horiuchi, Kinpei Yagi, Hirokazu Kouguchi, Takao Irie, Kyeong-Soon Kim, Yuzaburo Oku
Software Mentions: 1
Published: over 10 years ago

10.1038/s41419-020-03354-4

KDM6B is an androgen regulated gene and plays oncogenic roles by demethylating H3K27me3 at cyclin D1 promoter in prostate cancer
Cited by: 28
Author(s): Zhi Cao, Xiaolei Shi, Feng Tian, Yu Fang, Jason Wu, Stefan Mrđenović, Xinwen Nian, Jin Ji, Huan Xu, Kong Chen, Yisheng Xu, Xi Chen, Yuhua Huang, Xuedong Wei, Yu Ye, Bo Yang, Leland W.K. Chung, Fubo Wang
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.713197

Comprehensive Analysis of Fecal Microbiome and Metabolomics in Hepatic Fibrosis Rats Reveal Hepatoprotective Effects of Yinchen Wuling Powder From the Host-Microbial Metabolic Axis
Cited by: 5
Author(s): Yumeng Zhang, Min Zhao, Xue Jiang, Qiaoyu Qiao, Tingting Liu, Chunjie Zhao, Miao Wang
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.pntd.0006186

Multifaceted functional implications of an endogenously expressed tRNA fragment in the vector mosquito Aedes aegypti
Cited by: 10
Author(s): Matthew W. Eng, Anthony Clemons, Casey Hill, Roberta Engel, David W. Severson, Susanta K. Behura
Software Mentions: 1
Published: over 8 years ago

10.1186/s12889-018-5851-5

Association between internal migration and epidemic dynamics: an analysis of cause-specific mortality in Kenya and South Africa using health and demographic surveillance data
Cited by: 13
Author(s): Carren Ginsburg, Philippe Bocquier, Donatien Béguy, Sulaimon Afolabi, Kathleen Kahn, David Obor, Frank Tanser, Andrew Tomita, Marylene Wamukoya, Mark Collinson
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pntd.0009377

Combined gene deletion of dihydrofolate reductase-thymidylate synthase and pteridine reductase in Leishmania infantum
Cited by: 5
Author(s): Arijit Bhattacharya, Philippe Leprohon, Marc Ouellette
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pntd.0003975

Global Gene Expression Profiling through the Complete Life Cycle of Trypanosoma vivax
Cited by: 31
Author(s): Andrew P. Jackson, Sophie Goyard, Dong Xia, Bernardo J. Foth, Mandy Sanders, Jonathan M. Wastling, Paola Minóprio, Matthew Berriman
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pntd.0002402

Sex-Biased Expression of MicroRNAs in Schistosoma mansoni
Cited by: 59
Author(s): A. De Marco, Ana Kozomara, Jerome H. L. Hui, Aidan M. Emery, David Rollinson, Sam Griffiths-Jones, Matthew Ronshaugen
Software Mentions: 1
Published: almost 13 years ago

10.3389/fphys.2020.615025

Regulation of Peroxisome Proliferator-Activated Receptor Pathway During Torpor in the Garden Dormouse, Eliomys quercinus
Cited by: 3
Author(s): A. Watts, Samantha M. Logan, Anna Kübber‐Heiss, Annika Posautz, Gabrielle Stalder, Johanna Painer, Kristina Gasch, Sylvain Giroud, Kenneth B. Storey
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0211482

Community health workers trained to conduct verbal autopsies provide better mortality measures than existing surveillance: Results from a cross-sectional study in rural western Uganda
Cited by: 12
Author(s): Doreen Nabukalu, Moses Ntaro, Mathias Seviiri, Raquel Reyes, Matthew O. Wiens, Radhika Sundararajan, Edgar Mulogo, Ross M. Boyce
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0113780

Non-Communicable Disease Mortality and Risk Factors in Formal and Informal Neighborhoods, Ouagadougou, Burkina Faso: Evidence from a Health and Demographic Surveillance System
Cited by: 19
Author(s): Clémentine Rossier, Abdramane Soura, Géraldine Duthé, Sally E. Findley
Software Mentions: 1
Published: over 11 years ago

10.3389/fphys.2018.00878

A Mechanistic Computational Model Reveals That Plasticity of CD4+ T Cell Differentiation Is a Function of Cytokine Composition and Dosage
Cited by: 31
Author(s): Bhanwar Lal Puniya, Robert G. Todd, Akram Mohammed, Deborah M. Brown, Matteo Barberis, Tomáš Helikar
Software Mentions: 1
Published: about 8 years ago

10.1038/s41419-018-1080-1

Activation of the interferon type I response rather than autophagy contributes to myogenesis inhibition in congenital DM1 myoblasts
Cited by: 13
Author(s): Milena Rizzo, Pascale Beffy, R. Del Carratore, Alessandra Falleni, Virginia Pretini, Romina D’Aurizio, Annalisa Botta, Monica Evangelista, Andrea Stoccoro, Fabio Coppedè, Denis Furling, Marcella Simili
Software Mentions: 1
Published: almost 8 years ago

10.3402/gha.v7.21865

Using HIV-attributable mortality to assess the impact of antiretroviral therapy on adult mortality in rural Tanzania
Cited by: 8
Author(s): Chifundo Kanjala, Denna Michael, Jim Todd, Emma Slaymaker, Clara Calvert, Raphael Isingo, Alison Wringe, Basia Żaba, Mark Urassa
Software Mentions: 1
Published: over 12 years ago

10.3389/fphys.2021.663023

Transcriptomics Analysis and Re-sequencing Reveal the Mechanism Underlying the Thermotolerance of an Artificial Selection Population of the Pacific Oyster
Cited by: 7
Author(s): Yulong Tan, Rong Cong, Hongsheng Qi, Luping Wang, Guofan Zhang, Ying Pan, Li Li
Software Mentions: 1
Published: over 5 years ago

10.1038/s41419-017-0196-z

Oncogenic HSP60 regulates mitochondrial oxidative phosphorylation to support Erk1/2 activation during pancreatic cancer cell growth
Cited by: 74
Author(s): Chao Zhou, Hongwei Sun, Zheng Chen, Jing Gao, Qingzi Fu, Nianqi Hu, Xiaoli Shao, Yingying Zhou, Jingting Xiong, Kun Nie, Huaibin Zhou, Lijun Shen, Hezhi Fang, Jianxin Lyu
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0200210

Transcription factor induced conversion of human fibroblasts towards the hair cell lineage
Cited by: 23
Author(s): Maria B Duran Alonso, Iris Lopez Hernandez, Miguel A. de la Fuente, Javier García‐Sancho, Fernando Giráldez, Thomas Schimmang
Software Mentions: 1
Published: about 8 years ago

10.1038/s41419-021-03737-1

Small heat-shock protein HSPB3 promotes myogenesis by regulating the lamin B receptor
Cited by: 14
Author(s): Tatiana Tiago, Barbara Hummel, Federica Morelli, Valentina Basile, Jonathan Vinet, Veronica Galli, Laura Mediani, Francesco Antoniani, Silvia Pomella, Matteo Cassandri, Maria Giovanna Garone, Beatrice Silvestri, Marco Cimino, G. Cenacchi, Roberta Costa, Vincent Mouly, Ina Poser, Esti Yeger-Lotem, Alessandro Rosa, Simon Alberti, Rossella Rota, Anat Ben‐Zvi, Ritwick Sawarkar, Serena Carra
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0165268

Over Expression of NANOS3 and DAZL in Human Embryonic Stem Cells
Cited by: 19
Author(s): Sarita Panula, Ahmed Reda, Jan-Bernd Stukenborg, Cyril Ramathal, Meena Sukhwani, Halima Albalushi, Daniel Edsgärd, Michiko Nakamura, Olle Söder, Kyle E. Orwig, Shinya Yamanaka, Renee A. Reijo Pera, Outi Hovatta
Software Mentions: 1
Published: almost 10 years ago

10.1371/journal.pone.0100477

Transcriptomic Analysis of Prunus domestica Undergoing Hypersensitive Response to Plum Pox Virus Infection
Cited by: 35
Author(s): Bernardo Rodamilans, David San León, Louisa Mühlberger, Thierry Candresse, M. Neumüller, Juan Carlos Oliveros, Juan Antonio Garcı́a
Software Mentions: 1
Published: about 12 years ago

10.1371/journal.pone.0130902

Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis
Cited by: 23
Author(s): Yuanhao Zhang, Leahana Rowehl, Julia M. Krumsiek, Erika P. Orner, Nurmohammad Shaikh, Phillip I. Tarr, Erica Sodergren, George M. Weinstock, Edgar C. Boedeker, Xuejian Xiong, John Parkinson, Daniel N. Frank, Ellen Li, Grace Gathungu
Software Mentions: 1
Published: about 11 years ago

10.3389/fpls.2021.637190

Quantitative High-Throughput, Real-Time Bioassay for Plant Pathogen Growth in vivo
Cited by: 2
Author(s): Chunqiu Zhang, Ben N. Mansfeld, Ying-Zu Lin, Rebecca Grumet
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0187351

Kojic acid-mediated damage responses induce mycelial regeneration in the basidiomycete Hypsizygus marmoreus
Cited by: 10
Author(s): Jinjing Zhang, Hui Chen, Mingjie Chen, Hong Wang, Qian Wang, Xiaoxia Song, Haibo Hao, Zhen Feng
Software Mentions: 1
Published: almost 9 years ago

10.3389/fpls.2020.00643

Stomata and Sporophytes of the Model Moss Physcomitrium patens
Cited by: 10
Author(s): Robert S. Caine, Caspar Chater, Andrew J. Fleming, Julie E. Gray
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0200558

FAK auto-phosphorylation site tyrosine 397 is required for development but dispensable for normal skin homeostasis
Cited by: 8
Author(s): Joel B. Heim, Cera A. McDonald, Saranya P. Wyles, Sindhuja Sominidi‐Damodaran, Edwin J. Squirewell, Ming Li, Catherine Motsonelidze, Ralph T. Böttcher, Jan van Deursen, Alexander Meves
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0159372

Antennal and Abdominal Transcriptomes Reveal Chemosensory Genes in the Asian Citrus Psyllid, Diaphorina citri
Cited by: 39
Author(s): Zhongzhen Wu, Zuyong He, Shuying Bin, Lei Chen, Qunxin Han, Jintian Lin
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pone.0194765

IFN-λ and microRNAs are important modulators of the pulmonary innate immune response against influenza A (H1N2) infection in pigs
Cited by: 17
Author(s): Louise Brogaard, Lars Erik Larsen, Peter M. H. Heegaard, Christian Anthon, Jan Gorodkin, Ralf Dürrwald, Kerstin Skovgaard
Software Mentions: 1
Published: over 8 years ago

10.12688/wellcomeopenres.16243.2

Does recall time matter in verbal autopsies? Evidence from urban informal settlements in Nairobi, Kenya
Cited by: 1
Author(s): Donnie Mategula, Judy Gichuki
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21249344

Angiotensin-(1-7) Prevents Lipopolysaccharide-Induced Autophagy via the Mas Receptor in Skeletal Muscle
Cited by: 7
Author(s): Juan Carlos Aristizábal Rivera, Johanna Ábrigo, Franco Tacchi, Felipe Simón, Enrique Brandan, Robson A.S. Santos, Michael Bäder, Mario Chiong, Claudio Cabello-Verrugio
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2021.696229

Chromosome Level Assembly of Homozygous Inbred Line ‘Wongyo 3115’ Facilitates the Construction of a High-Density Linkage Map and Identification of QTLs Associated With Fruit Firmness in Octoploid Strawberry (Fragaria × ananassa)
Cited by: 10
Author(s): Hye-Eun Lee, Abinaya Manivannan, Sun Yi Lee, Koeun Han, Jun-Geol Yeum, Jinkwan Jo, Jinhee Kim, Il Rae Rho, Ye Rin Lee, Eun Su Lee, Byoung‐Cheorl Kang, Do-Sun Kim
Software Mentions: 1
Published: about 5 years ago

10.3389/fpls.2020.00387

Water Stable Isotopes in Ecohydrological Field Research: Comparison Between In Situ and Destructive Monitoring Methods to Determine Soil Water Isotopic Signatures
Cited by: 22
Author(s): Angelika Kübert, Sinikka Paulus, Adrian Dahlmann, Christiane Werner, Youri Rothfuss, Natalie Orlowski, Maren Dubbert
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0231206

Comparative analysis of sugarcane root transcriptome in response to the plant growth-promoting Burkholderia anthina MYSP113
Cited by: 30
Author(s): Mukesh Kumar Malviya, Changning Li, Manoj Kumar Solanki, Rajesh Kumar Singh, Reemon Htun, Pratiksha Singh, Krishan K. Verma, Li‐Tao Yang, Yang–Rui Li
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0185595

De novo transcriptome sequencing and assembly from apomictic and sexual Eragrostis curvula genotypes
Cited by: 15
Author(s): Ingrid Garbus, José R. Romero, Juan Pablo Selva, María Cielo Pasten, Carolina Chinestra, José Luís Carballo, Diego Zappacosta, Viviana Echenique
Software Mentions: 1
Published: almost 9 years ago

10.1371/journal.pone.0038298

Genome-Wide MicroRNA Expression Analysis of Clear Cell Renal Cell Carcinoma by Next Generation Deep Sequencing
Cited by: 104
Author(s): Susanne Osanto, Yongjun Qin, Henk P.J. Buermans, Joost Berkers, Evelyne Lerut, Jelle J. Goeman, Hendrik Van Poppel
Software Mentions: 1
Published: about 14 years ago

10.3389/fpls.2019.00691

A Large-Scale Genome-Wide Association Analyses of Ethiopian Sorghum Landrace Collection Reveal Loci Associated With Important Traits
Cited by: 49
Author(s): Gezahegn Girma, Habte Nida, Amare Seyoum, Moges Mekonen, Amare Nega, Dagnachew Lule, Kebede Dessalegn, Alemnesh Bekele, A Gebre-Yohannes, Adedayo Adeyanju, Alemu Tirfessa, Getachew Ayana, Taye Taddese, Firew Mekbib, Ketema Belete, Tesfaye Tesso, Gebisa Ejeta, Tesfaye Mengiste
Software Mentions: 1
Published: over 7 years ago