10.3390/insects12060493

Warm Temperatures Reduce Flower Attractiveness and Bumblebee Foraging
Cited by: 17
Author(s): Charlotte Descamps, Anne Jambrek, Muriel Quinet, Anne‐Laure Jacquemart
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2018.01607

Comparison of Microbiota in Patients Treated by Surgery or Chemotherapy by 16S rRNA Sequencing Reveals Potential Biomarkers for Colorectal Cancer Therapy
Cited by: 69
Author(s): Xingming Deng, Zhuofei Li, Li Guan, Bei Li, Xinhan Jin, Guoqing Lyu
Software Mentions: 4
Published: about 8 years ago

10.3389/fmicb.2016.01519

Transcriptomic and Metabolomic Analysis Revealed Multifaceted Effects of Phage Protein Gp70.1 on Pseudomonas aeruginosa
Cited by: 11
Author(s): Xia Zhao, Canhuang Chen, Xingyu Jiang, Wei Shen, Guangtao Huang, Shuai Le, Shuguang Lu, Lingyun Zou, Qingshan Ni, Ming Li, Yan Zhao, Jing Wang, Xiancai Rao, Fuquan Hu, Yinling Tan
Software Mentions: 4
Published: almost 10 years ago

10.1007/s11356-020-11597-z

Trace elements fingerprint of feathers differs between breeding and non-breeding areas in an Afro-Palearctic migratory bird, the barn swallow (Hirundo rustica)
Cited by: 4
Author(s): Marco Parolini, Michela Sturini, Federica Maraschi, Antonella Profumo, Alessandra Costanzo, Manuela Caprioli, Diego Rubolini, Roberto Ambrosini, Luca Canova
Software Mentions: 4
Published: over 5 years ago

10.1016/j.ebiom.2016.06.013

Repurposing Cationic Amphiphilic Antihistamines for Cancer Treatment
Cited by: 85
Author(s): Anne‐Marie Ellegaard, Christian Dehlendorff, Anna Vind, Atul Anand, Luise Cederkvist, Nikolaj H.T. Petersen, Jesper Nylandsted, Jan Stenvang, Anders Mellemgaard, Kell Østerlind, Søren Friis, Marja Jäättelä
Software Mentions: 4
Published: about 10 years ago

10.21203/rs.3.rs-539712/v1

Plasma Proteomics of COVID-19 Associated Cardiovascular Complications: Implications for Pathophysiology and Therapeutics
Cited by: 2
Author(s): Jason D. Roh, Robert Kitchen, James S. Guseh, Jenna McNeill, Malika Aïd, Amanda J. Martinot, Andy Yu, Colin Platt, James Rhee, Brittany Weber, Lena Trager, Margaret H. Hastings, Sarah Ducat, Peng Xia, Claire Castro, Bjarni Atlason, Timothy W. Churchill, Marcelo Di Carli, Patrick T. Ellinor, Dan H. Barouch, Jennifer E. Ho, Anthony Rosenzweig
Software Mentions: 4
Published: about 5 years ago

10.1186/s13229-021-00432-y

Neuroanatomy and behavior in mice with a haploinsufficiency of AT-rich interactive domain 1B (ARID1B) throughout development
Cited by: 17
Author(s): Jacob Ellegood, Stela P. Petkova, Adrienne Kinman, Lily R. Qiu, Anna Adhikari, A. Ayanna Wade, Darren Fernandes, Zsuzsa Lindenmaier, Amie Creighton, Lauryl M. J. Nutter, Alexander Nord, Jill L. Silverman, Jason P. Lerch
Software Mentions: 4
Published: over 5 years ago

10.18632/aging.101847

Integrated DNA methylation and gene expression analysis in the pathogenesis of coronary artery disease
Cited by: 30
Author(s): Miao Liu, Rong Yin, Qinghui Zhang, Xi‐Jiang Hu, Feng Huang, Wu-Xian Chen, Xiaoli Cao, Jin‐Zhen Wu
Software Mentions: 4
Published: over 7 years ago

10.3390/ijms20184414

Independent Component Analysis for Unraveling the Complexity of Cancer Omics Datasets
Cited by: 59
Author(s): Nicolas Sompairac, Petr V. Nazarov, Urszula Czerwińska, Laura Cantini, Anne Biton, Askhat Molkenov, Zhaxybay Zhumadilov, Emmanuel Barillot, François Radvanyi, Alexander N. Gorban, Ulykbek Kairov, Andreï Zinovyev
Software Mentions: 4
Published: almost 7 years ago

10.18632/aging.203178

Identification of differentially expressed genes-related prognostic risk model for survival prediction in breast carcinoma patients
Cited by: 1
Author(s): Jinyu Li, Gena Huang, Caixia Ren, Ning Wang, Silei Sui, Zuowei Zhao, Man Li
Software Mentions: 4
Published: about 5 years ago

10.3390/ani11071885

Post-Thaw Sperm Quality and Functionality in the Autochthonous Pig Breed Gochu Asturcelta
Cited by: 8
Author(s): J. N. Caamaño, Carolina Tamargo, Inmaculada Parrilla, Felipe Martínez‐Pastor, Lorena Padilla, Amer Salman, Carmen Fueyo, A Víctor Fernández, María José Merino, Tania Iglesias, C.O. Hidalgo
Software Mentions: 4
Published: about 5 years ago

10.3389/fpls.2018.01864

Revisiting the Soybean GmNAC Superfamily
Cited by: 37
Author(s): Bruno Paes de Melo, Otto Teixeira Fraga, José Cleydson Ferreira da Silva, Dalton O Ferreira, Otávio J. B. Brustolini, Paola A. Carpinetti, João Paulo Machado, Pedro A. B. Reis, Elizabeth P. B. Fontes
Software Mentions: 4
Published: over 7 years ago

10.18632/aging.102782

A nomogram combining long non-coding RNA expression profiles and clinical factors predicts survival in patients with bladder cancer
Cited by: 30
Author(s): Yifan Wang, Du Li, Xuemei Yang, Juan Li, Peilong Li, Yinghui Zhao, Weili Duan, Yingjie Chen, Yunshan Wang, Hongzhi Mao, Chuanxin Wang
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2021.625400

Rumen Epithelial Communities Share a Core Bacterial Microbiota: A Meta-Analysis of 16S rRNA Gene Illumina MiSeq Sequencing Datasets
Cited by: 22
Author(s): Chiron J Anderson, Lucas R Koester, Stephan Schmitz‐Esser
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.6118

A comparison of wetland characteristics between Agricultural Conservation Easement Program and public lands wetlands in West Virginia, USA
Cited by: 4
Author(s): Katharine E. Lewis, Christopher T. Rota, James T. Anderson
Software Mentions: 4
Published: over 6 years ago

10.18632/aging.102228

Prognostic value of a hypoxia-related microRNA signature in patients with colorectal cancer
Cited by: 31
Author(s): Yongmei Yang, Ailin Qu, Qi Wu, Xin Zhang, Lili Wang, Chen Li, Zhaogang Dong, Du Li, Chuanxin Wang
Software Mentions: 4
Published: over 6 years ago

10.3389/fnmol.2020.00057

Sequences of Reverse Transcribed Brain DNA Are Modified by Learning
Cited by: 2
Author(s): Antonio Giuditta, Joyce Casalino
Software Mentions: 4
Published: over 6 years ago

10.3389/fgene.2016.00075

Integrated Systems for NGS Data Management and Analysis: Open Issues and Available Solutions
Cited by: 35
Author(s): Valerio Bianchi, Arnaud Céol, Alessandro G. E. Ogier, Stefano de Pretis, Eugenia Galeota, Kamal Kishore, Pranami Bora, Ottavio Croci, Stefano Campaner, Bruno Amati, Marco J. Morelli, Mattia Pelizzola
Software Mentions: 4
Published: about 10 years ago

10.1002/ece3.7549

Differential reliance on aquatic prey subsidies influences mercury exposure in riparian arachnids and songbirds
Cited by: 10
Author(s): Allyson K. Jackson, Collin A. Eagles‐Smith, W. Douglas Robinson
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2017.02033

The Low-Diversity Fecal Microbiota of the Critically Endangered Kākāpō Is Robust to Anthropogenic Dietary and Geographic Influences
Cited by: 14
Author(s): Elena K. Perry, Andrew Digby, Michael W. Taylor
Software Mentions: 4
Published: almost 9 years ago

10.18632/aging.103127

Identification of HMG-box family establishes the significance of SOX6 in the malignant progression of glioblastoma
Cited by: 7
Author(s): Lan Jiang, Hui Yang, Tianbing Chen, Xiaolong Zhu, Jingjing Ye, Kun Lv
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.5081

Altitude effects on spatial components of vascular plant diversity in a subarctic mountain tundra
Cited by: 25
Author(s): Lucy Naud, Johannes Måsviken, Susana E. Freire, Anders Angerbjörn, Love Dalén, Fredrik Dalerum
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.7386

Phenotypic stability in scalar calcium of freshwater fish across a wide range of aqueous calcium availability in nature
Cited by: 4
Author(s): S. Laurie Sanderson, Alison M. Derry, Andrew P. Hendry
Software Mentions: 4
Published: over 5 years ago

10.1186/s12931-020-01544-4

Exploration of the sputum methylome and omics deconvolution by quadratic programming in molecular profiling of asthma and COPD: the road to sputum omics 2.0
Cited by: 6
Author(s): Espen E. Groth, Melanie Weber, Thomas Bahmer, Frauke Pedersen, Anne Kirsten, Daniela Börnigen, Klaus F. Rabe, Henrik Watz, Ole Ammerpohl, Torsten Goldmann
Software Mentions: 4
Published: almost 6 years ago

10.3389/fphys.2021.616055

Phenotypic Changes in T Cell and Macrophage Subtypes in Perivascular Adipose Tissues Precede High-Fat Diet-Induced Hypertension
Cited by: 6
Author(s): Ramya Kumar, Yongliang Yang, Andres Contreras, Hannah Garver, Sudin Bhattacharya, Gregory D. Fink, Cheryl E. Rockwell, Stephanie W. Watts
Software Mentions: 4
Published: over 5 years ago

10.1002/ece3.6962

Filter feeding, deviations from bilateral symmetry, developmental noise, and heterochrony of hemichordate and cephalochordate gills
Cited by: 6
Author(s): Charles Larouche‐Bilodeau, Xavier Guilbeault‐Mayers, Christopher B. Cameron
Software Mentions: 4
Published: almost 6 years ago

10.3389/fphys.2020.588313

High Throughput Sequencing of MicroRNA in Rainbow Trout Plasma, Mucus, and Surrounding Water Following Acute Stress
Cited by: 21
Author(s): Heather Ikert, Michael Lynch, Andrew C. Doxey, John P. Giesy, Mark R. Servos, Barbara A. Katzenback, Paul M. Craig
Software Mentions: 4
Published: over 5 years ago

10.1111/mec.15216

Sex‐specific changes in the aphid DNA methylation landscape
Cited by: 32
Author(s): Thomas C. Mathers, Sam T. Mugford, Lawrence Percival‐Alwyn, Yazhou Chen, Gemy Kaithakottil, David Swarbreck, Saskia A. Hogenhout, Cock van Oosterhout
Software Mentions: 4
Published: almost 7 years ago

10.3389/fnmol.2017.00340

Cell Type-Specific mRNA Dysregulation in Hippocampal CA1 Pyramidal Neurons of the Fragile X Syndrome Mouse Model
Cited by: 32
Author(s): Laura Ceolin, Nathalie Bouquier, Jihane Vitre-Boubaker, Stéphanie Rialle, Dany Séverac, Emmanuel Valjent, Julie Perroy, Emma Puighermanal
Software Mentions: 4
Published: almost 9 years ago

10.3389/fnmol.2017.00091

Identification of the Spinal Expression Profile of Non-coding RNAs Involved in Neuropathic Pain Following Spared Nerve Injury by Sequence Analysis
Cited by: 114
Author(s): Jun Zhou, Qingming Xiong, Hongtao Chen, Cheng-xiang Yang, Yu Fan
Software Mentions: 4
Published: over 9 years ago

10.1098/rsbl.2014.1053

Functional coupling constrains craniofacial diversification in Lake Tanganyika cichlids
Cited by: 10
Author(s): Masahito Tsuboi, Alejandro González-Voyer, Niclas Kolm
Software Mentions: 4
Published: over 11 years ago

10.18632/aging.103624

POC1A acts as a promising prognostic biomarker associated with high tumor immune cell infiltration in gastric cancer
Cited by: 6
Author(s): Jun Q. Lu, Xiaoyan Huang, Yaohui Wang, Jian‐Wei Xie, Jia-Bin Wang, Jiumao Lin, Qi‐Yue Chen, Long‐Long Cao, Ping Li, Chang‐Ming Huang, Chao‐Hui Zheng
Software Mentions: 4
Published: almost 6 years ago

10.3390/insects12070618

Genetic Screening to Identify Candidate Resistance Alleles to Cry1F Corn in Fall Armyworm Using Targeted Sequencing
Cited by: 10
Author(s): Katrina Schlum, Kurt Lamour, P. A. Tandy, Scott J. Emrich, Caroline Placidi De Bortoli, Tejas Rao, Diego M Viteri Dillon, Angela M. Linares‐Ramírez, Juan Luís Jurat-Fuentes
Software Mentions: 4
Published: about 5 years ago

10.3390/molecules21111431

Comparative Transcriptomic Analysis of Grape Berry in Response to Root Restriction during Developmental Stages
Cited by: 20
Author(s): Lu Feng, Qiong Lin, Di Wu, Shiping Wang, Dengliang Wang, Chongde Sun
Software Mentions: 4
Published: almost 10 years ago

10.3389/fnmol.2017.00419

Ribosomal Protein S6 Phosphorylation Is Involved in Novelty-Induced Locomotion, Synaptic Plasticity and mRNA Translation
Cited by: 27
Author(s): Emma Puighermanal, Anne Biever, Vincent Pascoli, Su Melser, Marine Pratlong, Laura Cutando, Stéphanie Rialle, Dany Séverac, Jihane Boubaker-Vitre, Oded Meyuhas, Giovanni Marsicano, Christian Lüscher, Emmanuel Valjent
Software Mentions: 4
Published: over 8 years ago

10.1007/s00438-020-01735-0

Major latex protein-like encoding genes contribute to Rhizoctonia solani defense responses in sugar beet
Cited by: 16
Author(s): Louise Holmquist, Fredrik Dölfors, Johan Fogelqvist, Jonathan Cohn, Thomas Kraft, Christina Dixelius
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12967-021-02804-7

Cerebrospinal fluid cells immune landscape in multiple sclerosis
Cited by: 11
Author(s): Zijian Li, Yongchao Liu, Aili Jia, Yueran Cui, Juan Feng
Software Mentions: 4
Published: over 5 years ago

10.1186/s12920-020-00800-2

TOP2A and CENPF are synergistic master regulators activated in cervical cancer
Cited by: 17
Author(s): Beiwei Yu, Long Chen, Weina Zhang, Yue Li, Yibiao Zhang, Yuan Gao, Xianlin Teng, Libo Zou, Qian Wang, Huiying Jia, Xiangtao Liu, Hui Zheng, Ping Hou, Hongyan Yu, Ying Sun, Zhiqin Zhang, Ping Zhang, Liqin Zhang
Software Mentions: 4
Published: almost 6 years ago

10.3389/fmolb.2021.647277

How Machine Learning and Statistical Models Advance Molecular Diagnostics of Rare Disorders Via Analysis of RNA Sequencing Data
Cited by: 12
Author(s): Lea D. Schlieben, Holger Prokisch, Vicente A. Yépez
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.7384

Location, but not defensive genotype, determines ectomycorrhizal community composition in Scots pine ( <i>Pinus sylvestris</i> L.) seedlings
Cited by: 2
Author(s): Jim Downie, Andy F. S. Taylor, Glenn R. Iason, Ben D. Moore, Jonathan Silvertown, Stephen Cavers, Richard A. Ennos
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2021.619112

Impact of Processed Food (Canteen and Oil Wastes) on the Development of Black Soldier Fly (Hermetia illucens) Larvae and Their Gut Microbiome Functions
Cited by: 31
Author(s): Thomas Klammsteiner, Andreas Walter, Tajda Bogataj, Carina Desirée Heussler, Blaž Stres, Florian M. Steiner, Birgit C. Schlick‐Steiner, Heribert Insam
Software Mentions: 4
Published: over 5 years ago

10.18632/oncotarget.8412

miR-509-3p is clinically significant and strongly attenuates cellular migration and multi-cellular spheroids in ovarian cancer
Cited by: 49
Author(s): Yinghong Pan, Gordon Robertson, Lykke Pedersen, Emilia L. Lim, Anadulce Hernández-Herrera, Amy C. Rowat, Sagar L. Patil, CY Chan, Yunfei Wen, Xinna Zhang, Upal Basu-Roy, Alka Mansukhani, Andy Chu, Payal Sipahimalani, Reanne Bowlby, Denise Brooks, Nina Thiessen, Cristian Coarfa, Yussanne Ma, Richard A. Moore, Jacquie Schein, Andrew J. Mungall, Jinsong Liu, Chad V. Pecot, Anil K. Sood, Steven J.M. Jones, Marco A. Marra, Preethi H. Gunaratne
Software Mentions: 4
Published: over 10 years ago

10.3389/fmicb.2019.01080

The Soil Microbiome of GLORIA Mountain Summits in the Swiss Alps
Cited by: 58
Author(s): Magdalene Adamczyk, Frank Hagedorn, Sonja Wipf, Johanna Donhauser, Pascal Vittoz, Christian Rixen, Aline Frossard, Jean‐Paul Theurillat, Beat Frey
Software Mentions: 4
Published: about 7 years ago

10.18632/aging.203168

Cell landscape atlas for patients with chronic thromboembolic pulmonary hypertension after pulmonary endarterectomy constructed using single-cell RNA sequencing
Cited by: 8
Author(s): Ran Miao, Xingbei Dong, Juanni Gong, Yidan Li, Xiaojuan Guo, Jianfeng Wang, Qiang Huang, Ying Wang, Jifeng Li, Suqiao Yang, Tuguang Kuang, Jun Wan, Min Liu, Zhenguo Zhai, Jiuchang Zhong, Yuanhua Yang
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0247378

Stool metabolome-microbiota evaluation among children and adolescents with obesity, overweight, and normal-weight using 1H NMR and 16S rRNA gene profiling
Cited by: 11
Author(s): José Diógenes Jaimes, Andrea Slavíčková, Jakub Hurych, Ondřej Cinek, Ben Nichols, Lucie Vodolánová, K. Černý, Jaroslav Havlík
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-017-02193-2

Multitrophic Effects of Belowground Parasitoid Learning
Cited by: 17
Author(s): Denis S. Willett, Hans T. Alborn, Lukasz L. Stelinski
Software Mentions: 4
Published: about 9 years ago

10.1038/sdata.2018.89

A collection of public transport network data sets for 25 cities
Cited by: 58
Author(s): Rainer Kujala, Christoffer Weckström, Richard K. Darst, Miloš N. Mladenović, Jari Saramäki
Software Mentions: 4
Published: about 8 years ago

10.1186/s12877-019-1297-6

Melatonin for the prevention of postoperative delirium in older adults: a systematic review and meta-analysis
Cited by: 58
Author(s): Ashley Campbell, David R. Axon, Jennifer Martin, Marion Slack, Lea Mollon, Jeannie K. Lee
Software Mentions: 4
Published: almost 7 years ago

10.1038/s41598-017-19128-6

Virtual Genome Walking across the 32 Gb Ambystoma mexicanum genome; assembling gene models and intronic sequence
Cited by: 9
Author(s): Teri Evans, Andrew D. Johnson, Matthew Loose
Software Mentions: 4
Published: over 8 years ago

10.1186/s13024-018-0303-3

Inhibition of monocyte-like cell extravasation protects from neurodegeneration in DBA/2J glaucoma
Cited by: 44
Author(s): Pete A. Williams, Catherine E. Braine, Krishnakumar Kizhatil, Nicole E. Foxworth, Nicholas G. Tolman, Jeffrey M. Harder, R. Scott, Gregory L. Sousa, Alyssa Panitch, Gareth R. Howell, Simon W. M. John
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2021.643731

Seed Banks as Incidental Fungi Banks: Fungal Endophyte Diversity in Stored Seeds of Banana Wild Relatives
Cited by: 11
Author(s): Rowena Hill, Theo Llewellyn, Elizabeth Downes, Joseph Oddy, Catriona MacIntosh, Simon Kallow, Bart Panis, John B. Dickie, Ester Gaya
Software Mentions: 4
Published: over 5 years ago

10.1093/conphys/coaa110

Assessment of fecal steroid and thyroid hormone metabolites in eastern North Pacific gray whales
Cited by: 18
Author(s): Leila S. Lemos, Amy Olsen, Angela Smith, Todd Chandler, Shawn Larson, Kathleen E. Hunt
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2020.573829

Evolution and Plasticity of the Transcriptome Under Temperature Fluctuations in the Fungal Plant Pathogen Zymoseptoria tritici
Cited by: 2
Author(s): Arthur J. Jallet, Arnaud Le Rouzic, Anne Génissel
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0246391

Variation in the timing of Covid-19 communication across universities in the UK
Cited by: 9
Author(s): Alejandro Quiroz Flores, Farhana Ferdousi Liza, Husam Quteineh, Barbara Czarnecka
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2020.584222

Functional Seasonality of Free-Living and Particle-Associated Prokaryotic Communities in the Coastal Adriatic Sea
Cited by: 8
Author(s): Paul A. Steiner, Javier Geijo, Eduard Fadeev, Aleix Obiol, Eva Sintes, Thomas Rattei, Gerhard J. Herndl
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2021.658292

Cross-Talk Between Butyric Acid and Gut Microbiota in Ulcerative Colitis Following Fecal Microbiota Transplantation
Cited by: 21
Author(s): Haoming Xu, Honglan Huang, Jing Xu, Jie He, Chong Zhao, Yuling Peng, Hailan Zhao, Wenqi Huang, Chuangyu Cao, Yongjian Zhou, Yuqiang Nie
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2021.649312

Characterising Post-mortem Bacterial Translocation Under Clinical Conditions Using 16S rRNA Gene Sequencing in Two Animal Models
Cited by: 2
Author(s): Lily Gates, Nigel Klein, Neil J. Sebire, Dagmar Alber
Software Mentions: 4
Published: about 5 years ago

10.15252/msb.20188323

Genome‐wide prediction of synthetic rescue mediators of resistance to targeted and immunotherapy
Cited by: 22
Author(s): Avinash Sahu, Joo S. Lee, Zhiyong Wang, Gao Zhang, Ramiro Iglesias-Bartolomé, Tian Tian, Zhi Wei, Benchun Miao, Nishanth Ulhas Nair, Olga Ponomarova, Adam Friedman, Arnaud Amzallag, Tabea Moll, Gyulnara G. Kasumova, Patricia Greninger, Regina K. Egan, Leah J. Damon, Dennie T. Frederick, Livnat Jerby‐Arnon, Allon Wagner, Kuoyuan Cheng, Seung Gu Park, Welles Robinson, Kevin Gardner, Genevieve M. Boland, Sridhar Hannenhalli, Meenhard Herlyn, Cyril H. Benes, Keith T. Flaherty, Ji Luo, J. Silvio Gutkind, Eytan Ruppin
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-018-28017-5

Consistent signatures of selection from genomic analysis of pairs of temporal and spatial Plasmodium falciparum populations from The Gambia
Cited by: 29
Author(s): Alfred Amambua-Ngwa, David Jeffries, Roberto Amato, Archibald Worwui, Karim Mane, Sukai Ceesay, Haddy Nyang, Davis Nwakanma, Joseph Okebe, Dominic P. Kwiatkowski, David J. Conway, Umberto D’Alessandro
Software Mentions: 4
Published: about 8 years ago

10.3389/fmicb.2019.00479

Shotgun Metagenomics of a Water Kefir Fermentation Ecosystem Reveals a Novel Oenococcus Species
Cited by: 72
Author(s): Marko Verce, Luc De Vuyst, Stefan Weckx
Software Mentions: 4
Published: over 7 years ago

10.3390/ani11082165

Comprehensive Transcriptomic Comparison between Porcine CD8− and CD8+ Gamma Delta T Cells Revealed Distinct Immune Phenotype
Cited by: 7
Author(s): Sang–Wook Kim, Bee-Oh Lim, Sameer-ul-Salam Mattoo, Eunyoung Oh, Chang-Gi Jeong, Won-Il Kim, Kyung-Tai Lee, Sang-Myeong Lee, Junmo Kim
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2021.656889

Frozen Mother’s Own Milk Can Be Used Effectively to Personalize Donor Human Milk
Cited by: 3
Author(s): Monica Lamberti, Natalie A. Harrison, Marion M Bendixen, Evon M. DeBose-Scarlett, Sharon Thompson, Josef Neu, Leslie A. Parker, Graciela L. Lorca
Software Mentions: 4
Published: over 5 years ago

10.31557/APJCP.2020.21.6.1787

Risk Scoring System based on lncRNA Expression for Predicting Survival in Hepatocellular Carcinoma with Cirrhosis
Cited by: 13
Author(s): Jiaxiang Ye, Haixia Li, Jiazhang Wei, Yue Luo, Hongmei Li, Jinyan Zhang, Xi Luo
Software Mentions: 4
Published: about 6 years ago

10.1186/s12915-021-01105-1

The relationship between sternum variation and mode of locomotion in birds
Cited by: 13
Author(s): Talia M. Lowi‐Merri, Roger Benson, Santiago Claramunt, David C. Evans
Software Mentions: 4
Published: almost 5 years ago

10.3389/fmicb.2018.01715

Investigating Effects of Tulathromycin Metaphylaxis on the Fecal Resistome and Microbiome of Commercial Feedlot Cattle Early in the Feeding Period
Cited by: 39
Author(s): Enrique Doster, Pablo Rovira, Noelle Noyes, Brandy A. Burgess, Xiang Yang, Margaret D. Weinroth, Steven M. Lakin, Christopher Dean, Lyndsey Linke, Roberta J. Magnuson, Kenneth Jones, Christina Boucher, Jamie Ruiz, K. E. Belk, Paul S. Morley
Software Mentions: 4
Published: about 8 years ago

10.1111/irv.12574

Primary care influenza-like illness surveillance in Ho Chi Minh City, Vietnam 2013-2015
Cited by: 8
Author(s): Stacy Todd, Nguyễn Thị Cẩm Hường, Nguyen Thi Le Thanh, Nguyen Ha Thao Vy, Nguyễn Thành Hưng, Tran Thi Nhu Thao, Huynh Thi Phuong, H. Rogier van Doorn, Vu Thi Ty Hang, Nguyễn Văn Vĩnh Châu, Jonathan M. Read, David G. Lalloo, Maciej F. Boni
Software Mentions: 4
Published: about 8 years ago

10.1007/s13592-019-00716-6

Assessing virulence of Varroa destructor mites from different honey bee management regimes
Cited by: 9
Author(s): Travis L. Dynes, Jennifer A. Berry, Keith S. Delaplane, Jacobus C. de Roode, Berry J. Brosi
Software Mentions: 4
Published: over 6 years ago

10.3390/membranes10120415

Reducing the Impacts of Biofouling in RO Membrane Systems through In Situ Low Fluence Irradiation Employing UVC-LEDs
Cited by: 9
Author(s): Philipp Sperle, Christian Wurzbacher, Jörg E. Drewes, Bertram Skibinski
Software Mentions: 4
Published: over 5 years ago

10.1111/rssc.12213

A Bayesian Model Selection Approach for Identifying Differentially Expressed Transcripts from RNA Sequencing Data
Cited by: 5
Author(s): Panagiotis Papastamoulis, Magnus Rattray
Software Mentions: 4
Published: over 9 years ago

10.3389/fmicb.2015.00966

Metagenomic analysis reveals that modern microbialites and polar microbial mats have similar taxonomic and functional potential
Cited by: 39
Author(s): Richard Allen White, Ian M. Power, Gregory M. Dipple, Gordon Southam, Curtis A. Suttle
Software Mentions: 4
Published: almost 11 years ago

10.3389/fmicb.2018.02929

Transcriptional Landscape of a blaKPC-2 Plasmid and Response to Imipenem Exposure in Escherichia coli TOP10
Cited by: 11
Author(s): Agnès B Jousset, Isabelle Rosinski‐Chupin, Julie Takissian, Philippe Glaser, Rémy A. Bonnin, Thierry Naas
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2019.02371

The Bacterial Communities of Little Cigars and Cigarillos Are Dynamic Over Time and Varying Storage Conditions
Cited by: 10
Author(s): Eoghan M. Smyth, Suhana Chattopadhyay, Kelsey R. Babik, Molly C. Reid, Jessica Chopyk, Leena Malayil, Prachi Kulkarni, Lauren E. Hittle, Pamela I. Clark, Amy R. Sapkota, Emmanuel F. Mongodin
Software Mentions: 4
Published: almost 7 years ago

10.3389/fmicb.2020.595910

A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data
Cited by: 17
Author(s): Xiaochen Yin, Tomer Altman, Erica Rutherford, Kiana West, Yonggan Wu, Jinlyung Choi, Paul L. Beck, Gilaad G. Kaplan, Karim Dabbagh, Todd Z. DeSantis, Shoko Iwai
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2021.576763

Responses of Soil Fungal Communities to Lime Application in Wheat Fields in the Pacific Northwest
Cited by: 5
Author(s): Chuntao Yin, Daniel Schlatter, Duncan R. Kroese, Timothy C. Paulitz, Christina H. Hagerty
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2019.01245

Outbreaks of an Emerging Viral Disease Covary With Differences in the Composition of the Skin Microbiome of a Wild United Kingdom Amphibian
Cited by: 23
Author(s): Lewis J. Campbell, Trenton W. J. Garner, Kevin Hopkins, Amber Gieselle Firefly Griffiths, Xavier A. Harrison
Software Mentions: 4
Published: about 7 years ago

10.3389/fmicb.2021.684903

Periphytic Biofilm Formation on Natural and Artificial Substrates: Comparison of Microbial Compositions, Interactions, and Functions
Cited by: 15
Author(s): Lingzhan Miao, Chengqian Wang, Tanveer M. Adyel, Jiaqi Zhao, Ning Yan, Jun Wu, Jun Hou
Software Mentions: 4
Published: about 5 years ago

10.3389/fmicb.2018.01339

Arbuscular Mycorrhizal Symbiosis Leads to Differential Regulation of Drought-Responsive Genes in Tissue-Specific Root Cells of Common Bean
Cited by: 29
Author(s): Gustavo Henrique Recchia, Enéas Ricardo Konzen, Fernanda Cassieri, Danielle Gregório Gomes Caldas, Siu Mui Tsai
Software Mentions: 4
Published: about 8 years ago

10.3390/jdb8010003

Matrix Metalloproteinase 13 Activity is Required for Normal and Hypoxia-Induced Precocious Hatching in Zebrafish Embryos
Cited by: 9
Author(s): Christopher D. Small, Megan el-Khoury, Ghislain Deslongchamps, Tillmann J. Benfey, Bryan D. Crawford
Software Mentions: 4
Published: over 6 years ago

10.1016/j.celrep.2021.109032

Erosion of human X chromosome inactivation causes major remodeling of the iPSC proteome
Cited by: 17
Author(s): Alejandro Brenes, Harunori Yoshikawa, Dalila Bensaddek, Bogdan Mirauta, Daniel D Seaton, Jens Hukelmann, Hao Jiang, Oliver Stegle, Angus I. Lamond
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2020.00490

Genomic Investigation of the Strawberry Pathogen Phytophthora fragariae Indicates Pathogenicity Is Associated With Transcriptional Variation in Three Key Races
Cited by: 12
Author(s): Thomas M. Adams, Andrew D. Armitage, Maria K. Sobczyk, Helen Bates, Javier F. Tabima, Brent Kronmiller, Brett M. Tyler, Niklaus J. Grünwald, Jim M. Dunwell, Charlotte F. Nellist, Richard J. Harrison
Software Mentions: 4
Published: over 6 years ago

10.1186/s12859-019-2789-2

Neural sentence embedding models for semantic similarity estimation in the biomedical domain
Cited by: 18
Author(s): Kathrin Blagec, Hong Xu, Asan Agibetov, Matthias Samwald
Software Mentions: 4
Published: over 7 years ago

10.3389/fmicb.2021.627569

Soil Metagenomics Reveals Effects of Continuous Sugarcane Cropping on the Structure and Functional Pathway of Rhizospheric Microbial Community
Cited by: 64
Author(s): Ziqin Pang, Fei Dong, Qiang Liu, Wenxiong Lin, Chaohua Hu, Zhaonian Yuan
Software Mentions: 4
Published: over 5 years ago

10.1155/2021/6644827

Multiomics Analysis of Genetics and Epigenetics Reveals Pathogenesis and Therapeutic Targets for Atrial Fibrillation
Cited by: 2
Author(s): Li Liu, Jianjun Huang, Baomin Wei, Jianjiao Mo, Qinjiang Wei, Chengcai Chen, Yan Wang, Xian-Nan Huang, Fengzhen He, Lingling Qin, Hehua Huang, Xue Li, Xingshou Pan
Software Mentions: 4
Published: over 5 years ago

10.1093/bib/bbz170

Deep learning-based clustering approaches for bioinformatics
Cited by: 104
Author(s): Md. Rezaul Karim, Oya Beyan, Achille Zappa, Ivan G. Costa, Dietrich Rebholz‐Schuhmann, Michael Cochez, Stefan Decker
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pcbi.1009285

ASCENT (Automated Simulations to Characterize Electrical Nerve Thresholds): A pipeline for sample-specific computational modeling of electrical stimulation of peripheral nerves
Cited by: 26
Author(s): Eric D. Musselman, Jake E. Cariello, Warren M. Grill, Nicole A. Pelot
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12865-021-00415-x

Predicting the allergenicity of legume proteins using a PBMC gene expression assay
Cited by: 2
Author(s): Mark Smits, Marjolein Meijerink, Thuy‐My Le, André C. Knulst, Aard de Jong, Martinus Petrus Maria Caspers, Everton Souto Lima, Lilia M. Babé, Gregory S. Ladics, Scott McClain, Geert F. Houben, Kitty Verhoeckx
Software Mentions: 4
Published: over 5 years ago

10.3389/fmicb.2018.02345

The Endophytic Mycobiome of European Ash and Sycamore Maple Leaves – Geographic Patterns, Host Specificity and Influence of Ash Dieback
Cited by: 44
Author(s): Markus Schlegel, Valentin Queloz, Thomas N. Sieber
Software Mentions: 4
Published: almost 8 years ago

10.3389/fmicb.2019.01988

Evaluation of the Nasopharyngeal Microbiota in Beef Cattle Transported to a Feedlot, With a Focus on Lactic Acid-Producing Bacteria
Cited by: 20
Author(s): Samat Amat, Devin B. Holman, Edouard Timsit, Timothy Schwinghamer, Trevor W. Alexander
Software Mentions: 4
Published: almost 7 years ago

10.3389/fmicb.2020.01259

Interactive Gene Expression Patterns of Susceptible and Resistant Lens ervoides Recombinant Inbred Lines and the Necrotroph Ascochyta lentis
Cited by: 1
Author(s): Zhe Cao, Karan Kapoor, Li Li, Sabine Banniza
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pcbi.1006453

Telescope: Characterization of the retrotranscriptome by accurate estimation of transposable element expression
Cited by: 81
Author(s): Matthew L. Bendall, Miguel de Mulder, Luis P. Íñiguez, Aarón Lecanda, Marcos Pérez‐Losada, Mario Ostrowski, R. Brad Jones, Lubbertus C. F. Mulder, Gustavo Reyes‐Terán, Keith A. Crandall, Christopher E. Ormsby, Douglas F. Nixon
Software Mentions: 4
Published: almost 7 years ago

10.1186/s12879-021-06077-9

A comparison of five epidemiological models for transmission of SARS-CoV-2 in India
Cited by: 27
Author(s): Soumik Purkayastha, Rupam Bhattacharyya, Ritwik Bhaduri, Ritoban Kundu, Xiaochen Gu, Maxwell Salvatore, Debashree Ray, Swapnil Mishra, Bhramar Mukherjee
Software Mentions: 4
Published: about 5 years ago

10.3389/fvets.2020.519601

Management Practices Associated With Prevalence of Lameness in Lambs in 2012–2013 in 1,271 English Sheep Flocks
Cited by: 3
Author(s): Katharine E. Lewis, Laura Green
Software Mentions: 4
Published: almost 6 years ago

10.3389/fmicb.2021.658927

Implications of Climate Change: How Does Increased Water Temperature Influence Biofilm and Water Quality of Chlorinated Drinking Water Distribution Systems?
Cited by: 14
Author(s): Carolina Calero Preciado, Joby Boxall, Víctor Soria‐Carrasco, Santiago Martínez, Isabel Douterelo
Software Mentions: 4
Published: about 5 years ago

10.3389/fpls.2020.00574

Decoding Gene Networks Modules That Explain the Recovery of Hymenoglossum cruentum Cav. After Extreme Desiccation
Cited by: 6
Author(s): Enrique Ostria‐Gallardo, Giovanni Larama, Graciela Berríos, Ana Fallard, Ana Gutiérrez-Moraga, Ingo Ensminger, Patrício Manque, Luisa Bascuñán‐Godoy, León A. Bravo
Software Mentions: 4
Published: about 6 years ago

10.3389/fmicb.2020.00581

The Potato Yam Phyllosphere Ectosymbiont Paraburkholderia sp. Msb3 Is a Potent Growth Promotor in Tomato
Cited by: 16
Author(s): Johannes B Herpell, Florian Schindler, Mersad Bejtović, Lena Fragner, Bocar Diallo, Anke Bellaire, Susanne Kublik, Bärbel U. Foesel, Silvia Gschwendtner, Melina Kerou, Michael Schloter, Wolfram Weckwerth
Software Mentions: 4
Published: over 6 years ago

10.3389/fmicb.2018.00298

Environmental and Host Effects on Skin Bacterial Community Composition in Panamanian Frogs
Cited by: 40
Author(s): Brandon J. Varela, David Lesbarrères, Roberto Ibáñez, David M. Green
Software Mentions: 4
Published: over 8 years ago

10.1186/s12889-021-10421-8

Late initiation of antiretroviral therapy: inequalities by educational level despite universal access to care and treatment
Cited by: 12
Author(s): Amanda Souza Rodrigues, Cláudio J. Struchiner, Lara E. Coelho, Valdiléa G. Veloso, Beatriz Grinsztejn, Paula M. Luz
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0256605

Development of strategic social information seeking: Implications for cumulative culture
Cited by: 2
Author(s): Kirsten H. Blakey, Eva Rafetseder, Mark Atkinson, Elizabeth Renner, Fía Cowan-Forsythe, Shivani J. Sati, Christine A. Caldwell
Software Mentions: 4
Published: almost 5 years ago

10.1016/j.celrep.2016.06.096

Exon Junction Complexes Show a Distributional Bias toward Alternatively Spliced mRNAs and against mRNAs Coding for Ribosomal Proteins
Cited by: 60
Author(s): Christian Hauer, Jana Sieber, Thomas Schwarzl, Ina Hollerer, Tomaž Curk, Anne-Marie Alleaume, Matthias W. Hentze, Andreas E. Kulozik
Software Mentions: 4
Published: about 10 years ago

10.3389/fmicb.2017.00944

Adaptations to High Salt in a Halophilic Protist: Differential Expression and Gene Acquisitions through Duplications and Gene Transfers
Cited by: 43
Author(s): Tommy Harding, Andrew J. Roger, Alastair G. B. Simpson
Software Mentions: 4
Published: about 9 years ago