10.3389/fimmu.2018.02533

Adenosinergic Signaling Alters Natural Killer Cell Functional Responses
Cited by: 72
Author(s): Andrea M. Chambers, Jiao Wang, Kyle B. Lupo, Hao Yu, Nadia A. Lanman, Sandro Matosevic
Software Mentions: 4
Published: over 7 years ago

10.1186/s12957-021-02201-w

Gene coexpression network approach to develop an immune prognostic model for pancreatic adenocarcinoma
Cited by: 5
Author(s): Xing Gu, Qiqi Zhang, Xueying Wu, Yue Fan, Ji Qian
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0216679

Seasonal adaptations of the hypothalamo-neurohypophyseal system of the dromedary camel
Cited by: 8
Author(s): Fatma Zohra Djazouli Alim, Elena V. Romanova, Yea Ling Tay, Ahmad Yamin bin Abdul Rahman, Kok‐Gan Chan, Kar‐Wai Hong, Mark F. Rogers, Bruce R. Southey, Michael Greenwood, André Souza Mecawi, Mohammad Rais Mustafa, Nicole Mahy, Colin Campbell, José Antunes‐Rodrigues, Jonathan V. Sweedler, David Murphy, Charles C.T. Hindmarch
Software Mentions: 4
Published: about 7 years ago

10.1093/brain/awaa163

Molecular and cellular correlates of human nerve regeneration: ADCYAP1/PACAP enhance nerve outgrowth
Cited by: 36
Author(s): Georgios Baskozos, Oliver Sandy-Hindmarch, Alex Clark, Katherine Windsor, Páll Karlsson, Greg A. Weir, Lucy A. McDermott, Joanna Burchall, Akira Wiberg, Dominic Furniss, David L.H. Bennett, Annina B. Schmid
Software Mentions: 4
Published: about 6 years ago

10.2217/fvl-2020-0256

Epidemiologic features and clinical course of COVID-19: a retrospective analysis of 19 patients in Germany
Cited by: 1
Author(s): Sara Elgamasy, Eman El-Sayed Sakr, Mohamed Gomaa Kamel, Sherief Ghozy, Ghadeer Gamal Elsayed, Mostafa Mahmoud Fahmy, Ahmed Ghazy, Mohamed M. Ibrahim, Mostafa Ebraheem Morra
Software Mentions: 4
Published: over 5 years ago

10.1111/mec.14377

Hybrid asexuality as a primary postzygotic barrier between nascent species: On the interconnection between asexuality, hybridization and speciation
Cited by: 59
Author(s): Karel Janko, Jan Pačes, Hilde Wilkinson‐Herbots, Rui J. Costa, Jan Röslein, Pavel Drozd, Nataliia Iakovenko, Jakub Rídl, Miluše Hroudová, Ján Kočí, Radka Reifová, Vendula Šlechtová, Lukáš Choleva
Software Mentions: 4
Published: over 8 years ago

10.3389/fpls.2017.01725

Combined Effects of Irrigation Regime, Genotype, and Harvest Stage Determine Tomato Fruit Quality and Aptitude for Processing into Puree
Cited by: 20
Author(s): Alexandre Arbex de Castro Vilas Boas, David L. Page, Robert Giovinazzo, Nadia Bertin, Anne-Laure Fanciullino
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0214868

Reconstruction and inference of the Lactococcus lactis MG1363 gene co-expression network
Cited by: 5
Author(s): Jimmy Omony, Anne de Jong, Jan Kok, Sacha A. F. T. van Hijum
Software Mentions: 4
Published: about 7 years ago

10.1186/s12918-017-0440-2

Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size
Cited by: 14
Author(s): Wenbin Guo, Cristiane P. G. Calixto, Nikoleta A. Τzioutziou, Ping Lin, Robbie Waugh, John W. Brown, Runxuan Zhang
Software Mentions: 4
Published: about 9 years ago

10.1186/s12870-017-1077-4

Maize network analysis revealed gene modules involved in development, nutrients utilization, metabolism, and stress response
Cited by: 23
Author(s): Shisong Ma, Zehong Ding, Pinghua Li
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0252987

Morus alba: Host reaction for Meloidogyne javanica, biological nematicides assessment and study of these relationships with yield and quality of leaves, cocoon and health of the silkworm
Cited by: 0
Author(s): Santino Aleandro da Silva, Renata da Rosa, Rachel Colauto Milanezi Aguiar, Cristianne Cordeiro Nascimento, Andressa Cristina Zamboni Machado
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0246367

Multi-omic modelling of inflammatory bowel disease with regularized canonical correlation analysis
Cited by: 6
Author(s): Lluís Revilla, Aida Mayorgas, A M Corraliza, Maria Carme Masamunt, Amira Metwaly, Dirk Haller, Eva Tristán, Anna Carrasco, María Esteve, Julián Panés, Elena Ricart, Juan José Lozano, Azucena Salas
Software Mentions: 4
Published: over 5 years ago

10.1186/s12859-017-1731-8

sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters
Cited by: 9
Author(s): Shailesh Tripathi, Jason Lloyd-Price, André S. Ribeiro, Olli Yli‐Harja, Matthias Dehmer, Frank Emmert‐Streib
Software Mentions: 4
Published: about 9 years ago

10.7717/peerj.11561

The m⁶A-related gene signature for predicting the prognosis of breast cancer
Cited by: 7
Author(s): Shanliang Zhong, Lin Zhenzhong, Huanwen Chen, Ling Mao, Jifeng Feng, Siying Zhou
Software Mentions: 4
Published: about 5 years ago

10.3389/fimmu.2021.668219

Fecal Bacteria Implicated in Biofilm Production Are Enriched and Associate to Gastrointestinal Symptoms in Patients With APECED – A Pilot Study
Cited by: 7
Author(s): Iivo Hetemäki, Ching Jian, Saila Laakso, Outi Mäkitie, Anne-Maria Pajari, Willem M. de Vos, T. Petteri Arstila, Anne Salonen
Software Mentions: 4
Published: about 5 years ago

10.3389/fimmu.2021.677730

Dual-Organ Transcriptomic Analysis of Rainbow Trout Infected With Ichthyophthirius multifiliis Through Co-Expression and Machine Learning
Cited by: 9
Author(s): HyeongJin Roh, Nameun Kim, Yoonhang Lee, Jiyeon Park, Bo Seong Kim, Mu Kun Lee, Chan-Il Park, Do-Hyung Kim
Software Mentions: 4
Published: about 5 years ago

10.1186/s41927-019-0078-3

Abstracts of scientific contributions to GCOM 2019
Cited by: 0
Author(s):
Software Mentions: 4
Published: almost 7 years ago

10.1002/cam4.3035

Develop a circular RNA–related regulatory network associated with prognosis of gastric cancer
Cited by: 9
Author(s): Shuxun Wei, Shang‐Hua Teng, Jun Yao, Wenchao Gao, Jiachen Zang, Guangyong Wang, Zhiqian Hu
Software Mentions: 4
Published: almost 6 years ago

10.3389/fimmu.2020.00445

Perirenal Adipose Tissue Displays an Age-Dependent Inflammatory Signature Associated With Early Graft Dysfunction of Marginal Kidney Transplants
Cited by: 6
Author(s): Romain Boissier, Pauline François, B. Gondran Tellier, Meunier Maité, Luc Lyonnet, Stéphanie Simoncini, Jéremy Magalon, Tristan Legris, Alexis Laurent, Laurent Guy, Françoise Dignat-George, G. Karsenty, Stéphane Burtey, É. Lechevallier, Florence Sabatier, Pascale Paul
Software Mentions: 4
Published: over 6 years ago

10.3389/fimmu.2018.02685

Sepsis Induces a Long-Lasting State of Trained Immunity in Bone Marrow Monocytes
Cited by: 45
Author(s): Katharina Bomans, Judith Schenz, Isabella Sztwiertnia, Dominik Schaack, Markus Weigand, Florian Uhle
Software Mentions: 4
Published: over 7 years ago

10.3389/fimmu.2020.01089

IL-12 Signaling Contributes to the Reprogramming of Neonatal CD8+ T Cells
Cited by: 4
Author(s): Darely Y. Gutiérrez-Reyna, Alejandra Cedillo-Baños, Linda A Kempis-Calanis, Oscar Ramírez-Pliego, Lisa Bargier, Denis Puthier, José David Abad Flores, Morgane Thomas‐Chollier, Denis Thieffry, Alejandra Medina-Rivera, Salvatore Spicuglia, María Angélica Santana
Software Mentions: 4
Published: about 6 years ago

10.26508/lsa.202000961

A role for condensin in mediating transcriptional adaptation to environmental stimuli
Cited by: 4
Author(s): Lucy Lancaster, Harshil Patel, Gavin Kelly, Frank Uhlmann
Software Mentions: 4
Published: about 5 years ago

10.1186/s13643-021-01766-7

Association of different positive end-expiratory pressure selection strategies with all-cause mortality in adult patients with acute respiratory distress syndrome
Cited by: 2
Author(s): Manuel Tisminetzky, José Dianti, Bruno L. Ferreyro, Federico Angriman, Lorenzo Del Sorbo, Sachin Sud, Daniel Talmor, Eddy Fan, Niall D. Ferguson, Ary Serpa Neto, Neill K. J. Adhikari, Ewan C. Goligher
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12859-021-04138-z

Dynamic model updating (DMU) approach for statistical learning model building with missing data
Cited by: 3
Author(s): Richa Jain, Wei Xu
Software Mentions: 4
Published: about 5 years ago

10.3389/fgene.2017.00052

Evolinc: A Tool for the Identification and Evolutionary Comparison of Long Intergenic Non-coding RNAs
Cited by: 25
Author(s): Andrew D. L. Nelson, Upendra Kumar Devisetty, Kyle Palos, Asher Haug-Baltzell, Eric Lyons, Mark A. Beilstein
Software Mentions: 4
Published: about 9 years ago

10.1177/0272989X17696997

A Procedure for Deriving Formulas to Convert Transition Rates to Probabilities for Multistate Markov Models
Cited by: 20
Author(s): Emrys A. Jones, David Epstein, Leticia García-Mochón
Software Mentions: 4
Published: over 9 years ago

10.7717/peerj.8873

Bioinformatics analyses of retinoblastoma reveal the retinoblastoma progression subtypes
Cited by: 6
Author(s): Manjing Cao, Sha Wang, Jing Zou, Wanpeng Wang
Software Mentions: 4
Published: about 6 years ago

10.3389/fgene.2019.00210

Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle
Cited by: 23
Author(s): Wellison J. S. Diniz, Gianluca Mazzoni, Luiz Lehmann Coutinho, Priyanka Banerjee, Ludwig Geistlinger, Francesca Bertolini, Juliana Afonso, P. S. N. Oliveira, P. C. Tizioto, Haja N. Kadarmideen, Luciana Correia de Almeida Regitano
Software Mentions: 4
Published: over 7 years ago

10.3389/fgene.2020.599292

Hybrid Incompatibilities and Transgressive Gene Expression Between Two Closely Related Subspecies of Drosophila
Cited by: 10
Author(s): Alwyn C. Go, Alberto Civetta
Software Mentions: 4
Published: over 5 years ago

10.3389/fgene.2020.00176

Integrative Analysis of MicroRNA and Gene Interactions for Revealing Candidate Signatures in Prostate Cancer
Cited by: 34
Author(s): Jingchao Wei, Yinghao Yin, Qiancheng Deng, Jun Zhou, Yong Wang, Guangming Yin, Jianfu Yang, Yuxin Tang
Software Mentions: 4
Published: over 6 years ago

10.3390/ijms22010275

The Proteomic Landscape of Resting and Activated CD4+ T Cells Reveal Insights into Cell Differentiation and Function
Cited by: 8
Author(s): Yashwanth Subbannayya, Markus Haug, Sneha M. Pinto, Varshasnata Mohanty, Hany Zakaria Meås, Trude Helen Flo, T. S. Keshava Prasad, Richard K. Kandasamy
Software Mentions: 4
Published: over 5 years ago

10.26508/lsa.201800080

RNase E cleavage shapes the transcriptome of<i>Rhodobacter sphaeroides</i>and strongly impacts phototrophic growth
Cited by: 20
Author(s): Konrad U. Förstner, Carina M. Reuscher, Kerstin Haberzettl, Lennart Weber, Gabriele Klug
Software Mentions: 4
Published: almost 8 years ago

10.7554/eLife.51089

Pan-mammalian analysis of molecular constraints underlying extended lifespan
Cited by: 50
Author(s): Amanda Kowalczyk, Raghavendran Partha, Nathan L. Clark, Maria Chikina
Software Mentions: 4
Published: over 6 years ago

10.7717/peerj.7135

Comprehensive analysis of an lncRNA-miRNA-mRNA competing endogenous RNA network in pulpitis
Cited by: 31
Author(s): Fangcao Lei, Han Zhang, Xiaoli Xie
Software Mentions: 4
Published: about 7 years ago

10.1155/2021/3803724

Comprehensive Analysis of m5C RNA Methylation Regulator Genes in Clear Cell Renal Cell Carcinoma
Cited by: 10
Author(s): Jiajin Wu, Chao Hou, Yuhao Wang, Zhongyuan Wang, Pu Li, Zengjun Wang
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12934-021-01583-6

Molecular engineering improves antigen quality and enables integrated manufacturing of a trivalent subunit vaccine candidate for rotavirus
Cited by: 6
Author(s): Neil C. Dalvie, Joseph Brady, Laura E. Crowell, Mary Kate Tracey, Andrew M. Biedermann, Kawaljit Kaur, John M. Hickey, D. Lee Kristensen, Alexandra Bonnyman, Sergio A. Rodriguez-Aponte, Charles A. Whittaker, Marina Bok, Celina G. Vega, Tarit Mukhopadhyay, Sangeeta B. Joshi, David B. Volkin, Viviana Parreño, Kerry R. Love, J. Christopher Love
Software Mentions: 4
Published: about 5 years ago

10.1007/s00248-019-01424-5

Early Colonization of Weathered Polyethylene by Distinct Bacteria in Marine Coastal Seawater
Cited by: 81
Author(s): Gabriel Erni-Cassola, Robyn J. Wright, Matthew I. Gibson, Joseph Alexander Christie-Oleza
Software Mentions: 4
Published: almost 7 years ago

10.1002/cam4.3513

Efficacy of intravesical therapies on the prevention of recurrence and progression of non‐muscle‐invasive bladder cancer: A systematic review and network meta‐analysis
Cited by: 27
Author(s): Junlin Lu, Qi‐Dong Xia, Yilong Lu, Zheng Liu, Peng Zhou, Henglong Hu, Shaogang Wang
Software Mentions: 4
Published: almost 6 years ago

10.3389/fgene.2020.556418

Transcriptional Programs Underlying Cold Acclimation of Common Carp (Cyprinus carpio L.)
Cited by: 14
Author(s): Yong Long, Xixi Li, Fengyang Li, Guodong Ge, Ran Liu, Guangliang Song, Qing Li, Zhengxue Qiao
Software Mentions: 4
Published: almost 6 years ago

10.1038/s41598-018-21077-7

Patterns of sexual size dimorphism in horseshoe bats: Testing Rensch’s rule and potential causes
Cited by: 8
Author(s): Hui Wu, Tinglei Jiang, Xiaobin Huang, Jiang Feng
Software Mentions: 4
Published: over 8 years ago

10.1093/iob/obab013

Ecomorphometric Analysis of Diversity in Cranial Shape of Pygopodid Geckos
Cited by: 3
Author(s): George P Gurgis, Juan D. Daza, Ian G. Brennan, Mark N. Hutchinson, Aaron M. Bauer, Michelle R. Stocker, Jennifer C. Olori
Software Mentions: 4
Published: over 5 years ago

10.1186/s40168-020-00803-2

Characterization of antibiotic resistance and host-microbiome interactions in the human upper respiratory tract during influenza infection
Cited by: 38
Author(s): Lingdi Zhang, Christian V. Forst, Aubree Gordon, Gabrielle Gussin, Adam Geber, Porfirio J. Fernandez, Tao Ding, Lauren Lashua, Minghui Wang, Ángel Balmaseda, Richard Bonneau, Bin Zhang, Elodie Ghedin
Software Mentions: 4
Published: over 6 years ago

10.3389/fgene.2020.597459

Pearl Sac Gene Expression Profiles Associated With Pearl Attributes in the Silver-Lip Pearl Oyster, Pinctada maxima
Cited by: 9
Author(s): Carmel McDougall, Felipe Aguilera, Ali Shokoohmand, Patrick Moase, Bernard M. Degnan
Software Mentions: 4
Published: over 5 years ago

10.3389/fgene.2020.00650

Genome Regulation and Gene Interaction Networks Inferred From Muscle Transcriptome Underlying Feed Efficiency in Pigs
Cited by: 9
Author(s): Victor Adriano Okstoft Carmelo, Haja N. Kadarmideen
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0137181

Biomechanical Diversity of Mating Structures among Harvestmen Species Is Consistent with a Spectrum of Precopulatory Strategies
Cited by: 23
Author(s): Mercedes Burns, Jeffrey W. Shultz
Software Mentions: 4
Published: almost 11 years ago

10.3389/fgene.2019.00306

Chromatin State-Based Analysis of Epigenetic H3K4me3 Marks of Arabidopsis in Response to Dark Stress
Cited by: 13
Author(s): Hengyu Yan, Yue Liu, Kang Zhang, Jakyoung Song, Wenying Xu, Zhen Su
Software Mentions: 4
Published: over 7 years ago

10.1186/s40168-021-01103-z

The microbial metabolite p-Cresol induces autistic-like behaviors in mice by remodeling the gut microbiota
Cited by: 66
Author(s): Patricia Bermudez-Martin, Jérôme A.J. Becker, Nicolas Caramello, Sebastian P. Fernandez, Renan Costa Campos, Juliette Canaguier, Susana Barbosa, Laura Martinez‐Gili, Antonis Myridakis, Marc Dumas, Aurélia Bruneau, Claire Cherbuy, Philippe Langella, Jacques Crinon, Jean Marie Launay, Joëlle Chabry, Jacques Barik, Julie Le Merrer, Nicolas Glaichenhaus, Laetitia Davidovic
Software Mentions: 4
Published: about 5 years ago

10.1186/s40168-021-01016-x

Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics
Cited by: 27
Author(s): Yuan Lin, Liye Wang, Ke Xu, Kan Li, Hongqiang Ren
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.57274

Estrogen exacerbates mammary involution through neutrophil-dependent and -independent mechanism
Cited by: 14
Author(s): Chew Leng Lim, Yu Zuan Or, Zoe Ong, Hwa Hwa Chung, Hirohito Hayashi, Smeeta Shrestha, Shunsuke Chiba, Feng Lin, Valerie Chun Ling Lin
Software Mentions: 4
Published: almost 6 years ago

10.1186/s40168-020-00859-0

Engineering CRISPR/Cas9 to mitigate abundant host contamination for 16S rRNA gene-based amplicon sequencing
Cited by: 22
Author(s): Luyang Song, Kabin Xie
Software Mentions: 4
Published: about 6 years ago

10.7717/peerj.11997

A variable-rate quantitative trait evolution model using penalized-likelihood
Cited by: 12
Author(s): Liam J. Revell
Software Mentions: 4
Published: almost 5 years ago

10.7717/peerj.8085

Adaptation, phylogeny, and covariance in milk macronutrient composition
Cited by: 0
Author(s): Gregory E. Blomquist
Software Mentions: 4
Published: over 6 years ago

10.3390/microorganisms9030530

The Adult Phenylketonuria (PKU) Gut Microbiome
Cited by: 16
Author(s): Viviana J. Mancilla, Allison E. Mann, Yan Zhang, Michael S. Allen
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.60266

Single nuclei RNA-seq of mouse placental labyrinth development
Cited by: 68
Author(s): Bryan Marsh, Robert Blelloch
Software Mentions: 4
Published: over 5 years ago

10.3390/ijerph18168602

Using Latent Class Analysis to Identify Health Lifestyle Profiles and Their Association with Suicidality among Adolescents in Benin
Cited by: 2
Author(s): Fanny Hoogstoel, Lucresse Corine Fassinou, Sékou Samadoulougou, Céline Mahieu, Yves Coppieters, Fati Kirakoya‐Samadoulougou
Software Mentions: 4
Published: almost 5 years ago

10.1002/ece3.5652

The evolution of climate tolerance in conifer‐feeding aphids in relation to their host's climatic niche
Cited by: 8
Author(s): Pierre Arnal, Armelle Coeur d’Acier, Colin Favret, Gottfried Martin, Ge‐Xia Qiao, Emmanuelle Jousselin, Andrea S. Meseguer
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0163348

On the Morphological Description of Tracheal and Esophageal Displacement and Its Phylogenetic Distribution in Avialae
Cited by: 5
Author(s): Jeremy Klingler
Software Mentions: 4
Published: almost 10 years ago

10.7717/peerj.8744

Dental characters used in phylogenetic analyses of mammals show higher rates of evolution, but not reduced independence
Cited by: 8
Author(s): Neil Brocklehurst, Gemma Louise Benevento
Software Mentions: 4
Published: over 6 years ago

10.7717/peerj.11777

Inter- and intraspecific variation in the <i>Artibeus</i> species complex demonstrates size and shape partitioning among species
Cited by: 10
Author(s): Brandon P Hedrick
Software Mentions: 4
Published: about 5 years ago

10.3389/fncel.2021.629279

Validation of Induced Microglia-Like Cells (iMG Cells) for Future Studies of Brain Diseases
Cited by: 24
Author(s): Atoshi Banerjee, Yujie Lu, Kenny Do, Travis Mize, Xiaogang Wu, Xiangning Chen, Jingchun Chen
Software Mentions: 4
Published: over 5 years ago

10.3390/ijerph18136934

A Latent Class Analysis of Health Lifestyles in Relation to Suicidality among Adolescents in Mauritius
Cited by: 6
Author(s): Fanny Hoogstoel, Sékou Samadoulougou, Vincent Lorant, Fati Kirakoya‐Samadoulougou
Software Mentions: 4
Published: about 5 years ago

10.3390/microorganisms8091347

Gut Microbial Changes in Diabetic db/db Mice and Recovery of Microbial Diversity upon Pirfenidone Treatment
Cited by: 17
Author(s): Harinder Singh, Sadaaki Miyamoto, Manjula Darshi, Manolito Torralba, Ki-Ryong Kwon, Kumar Sharma, Rembert Pieper
Software Mentions: 4
Published: almost 6 years ago

10.3389/fendo.2019.00735

Reduced Expression of PLCXD3 Associates With Disruption of Glucose Sensing and Insulin Signaling in Pancreatic β-Cells
Cited by: 18
Author(s): Hayat Aljaibeji, Debasmita Mukhopadhyay, Abdul Khader Mohammed, Sarah Dhaiban, Mahmood Yaseen Hachim, Noha Mousaad Elemam, Nabil Sulaiman, Albert Salehi, Jalal Taneera
Software Mentions: 4
Published: over 6 years ago

10.3389/fcimb.2020.00173

Cystic Fibrosis Patients Infected With Epidemic Pseudomonas aeruginosa Strains Have Unique Microbial Communities
Cited by: 7
Author(s): Nicole Acosta, Barbara Waddell, Alya Heirali, Ranjani Somayaji, Michael G. Surette, Matthew L. Workentine, Harvey Rabin, Michael D. Parkins
Software Mentions: 4
Published: about 6 years ago

10.3390/microorganisms8020214

Succession and Colonization Dynamics of Endolithic Phototrophs within Intertidal Carbonates
Cited by: 11
Author(s): Daniel Roush, Ferrán García-Pichel
Software Mentions: 4
Published: over 6 years ago

10.3389/fped.2020.599638

Digital Simulation Improves, Maintains, and Helps Transfer Health-Care Providers' Neonatal Resuscitation Knowledge
Cited by: 6
Author(s): Simran K. Ghoman, Maria Cutumisu, Georg M. Schmölzer
Software Mentions: 4
Published: over 5 years ago

10.3389/fcell.2021.591754

Scaffold-Mediated Developmental Effects on Human Induced Pluripotent Stem Cell-Derived Cardiomyocytes Are Preserved After External Support Removal
Cited by: 1
Author(s): Jun Li, Jong-Kook Lee, Keiko Miwa, Yuki Kuramoto, Kiyoshi Masuyama, Hideki Yasutake, Satoki Tomoyama, Hiroyuki Nakanishi, Yasushi Sakata
Software Mentions: 4
Published: over 5 years ago

10.3390/microorganisms9040718

Effects of Clinical Wastewater on the Bacterial Community Structure from Sewage to the Environment
Cited by: 5
Author(s): Ilse Verburg, H. Pieter J. van Veelen, Karola Waar, John W. A. Rossen, Alex Friedrich, Lucía Hernández Leal, Silvia García-Cobos, Heike Schmitt
Software Mentions: 4
Published: over 5 years ago

10.3390/ijms22052276

Time-Resolved scRNA-Seq Tracks the Adaptation of a Sensitive MCL Cell Line to Ibrutinib Treatment
Cited by: 4
Author(s): Viktoria Fuhr, Ehsan Vafadarnejad, Oliver Dietrich, Panagiota Arampatzi, Angela Riedel, Antoine‐Emmanuel Saliba, Andreas Rosenwald, Hilka Rauert-Wunderlich
Software Mentions: 4
Published: over 5 years ago

10.3389/fcell.2020.572281

The Endometrial Transcription Landscape of MRKH Syndrome
Cited by: 13
Author(s): Thomas Hentrich, André Koch, Nico Weber, Alexander Kilzheimer, Ana Luiza Silva Maia, Simone Burkhardt, Katharina Rall, Nicolas Casadei, Oliver Kohlbacher, Olaf Rieß, Julia M. Schulze‐Hentrich, Sara Brucker
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0164330

Response of Two Mytilids to a Heatwave: The Complex Interplay of Physiology, Behaviour and Ecological Interactions
Cited by: 32
Author(s): Celia Olabarria, Ignácio Gestoso, Fernando P. Lima, Elsa Vázquez, Luc A. Comeau, Filipe Veloso Gomes, Rui Seabra, José M. F. Babarro
Software Mentions: 4
Published: almost 10 years ago

10.1186/s12891-018-2006-x

No difference in the functional improvements between unilateral and bilateral total knee replacements
Cited by: 16
Author(s): Yao-Ming Huang, Chin Lin, Jung-Mou Yang, Leou-Chyr Lin, Chih-Yuan Mou, Kwo-Tsao Chiang, Man-Gang Lee, Hsin‐An Chang, Hsueh-Lu Chang, Wan‐Fu Su, Shih-Jen Yeh, Hung Chang, Chih‐Chien Wang, Sui-Lung Su
Software Mentions: 4
Published: over 8 years ago

10.3389/fbioe.2020.00035

Dynamic Alternative Splicing During Mouse Preimplantation Embryo Development
Cited by: 13
Author(s): Yongzhong Xing, Weihao Yang, Guoqing Liu, Xiangjun Cui, Hu Meng, Hongyu Zhao, Xingbo Zhao, Jun Li, Zhe Liu, Michael Q. Zhang, Liang Cai
Software Mentions: 4
Published: over 6 years ago

10.3390/ijms22052481

Differential Morpho-Physiological and Transcriptomic Responses to Heat Stress in Two Blueberry Species
Cited by: 5
Author(s): Jodi B Callwood, Kalpalatha Melmaiee, Krishnanand P. Kulkarni, Amaranatha R. Vennapusa, Diarra Aicha, Michael J. Moore, Nicholi Vorsa, Purushothaman Natarajan, Umesh K. Reddy, Sathya Elavarthi
Software Mentions: 4
Published: over 5 years ago

10.12688/f1000research.16005.3

MSF: Modulated Sub-graph Finder
Cited by: 0
Author(s): Mariam R. Farman, Ivo L. Hofacker, Fabian Amman
Software Mentions: 4
Published: over 7 years ago

10.3389/fbioe.2020.00155

Multiple Small RNAs Interact to Co-regulate Ethanol Tolerance in Zymomonas mobilis
Cited by: 9
Author(s): Richou Han, Katie Haning, Juan C. Gonzalez-Rivera, Yongqiang Yang, Runxia Li, Seung Hee Cho, Ju Huang, Bobi A. Simonsen, Shihui Yang, Lydia M. Contreras
Software Mentions: 4
Published: over 6 years ago

10.1186/s13229-019-0306-0

Cellular and molecular characterization of multiplex autism in human induced pluripotent stem cell-derived neurons
Cited by: 13
Author(s): Emily M.A. Lewis, Kesavan Meganathan, Dustin Baldridge, Paul Gontarz, Bo Zhang, Azad Bonni, John N. Constantino, Kristen L. Kroll
Software Mentions: 4
Published: over 6 years ago

10.1186/1471-2105-12-273

Gene set analysis for longitudinal gene expression data
Cited by: 11
Author(s): Ke Zhang, Haiyan Wang, Arne C. Bathke, Solomon W. Harrar, Hans‐Peter Piepho, Youping Deng
Software Mentions: 4
Published: about 15 years ago

10.1093/molbev/msv016

The Avian Transcriptome Response to Malaria Infection
Cited by: 71
Author(s): Elin Videvall, Charlie K. Cornwallis, Vaidas Palinauskas, Gediminas Valkiūnas, Olof Hellgren
Software Mentions: 4
Published: over 11 years ago

10.1093/molbev/msx190

Global Dosage Compensation Is Ubiquitous in Lepidoptera, but Counteracted by the Masculinization of the Z Chromosome
Cited by: 37
Author(s): Ann Kathrin Huylmans, Ariana Macon, Beatriz Vicoso
Software Mentions: 4
Published: about 9 years ago

10.1093/molbev/msaa206

Amoeba Genome Reveals Dominant Host Contribution to Plastid Endosymbiosis
Cited by: 20
Author(s): Duckhyun Lhee, Jun Mo Lee, Khaoula Ettahi, Chung Hyun Cho, Ji San Ha, Ya Fan Chan, Udi Zelzion, Timothy G. Stephens, Dana C. Price, Arwa Gabr, Eva C. M. Nowack, Debashish Bhattacharya, Hwan Su Yoon
Software Mentions: 4
Published: almost 6 years ago

10.3399/bjgpopen17X100677

Delivering integrated child development care in Pakistan: protocol for a clustered randomised trial
Cited by: 7
Author(s): Muhammad Amir Khan, Syeda Somyyah Owais, Claire Blacklock, Shirin Anil, Sehrish Ishaq, Shazia Maqbool, Haroon Khan, Fareed Aslam Minhas, John Walley
Software Mentions: 4
Published: over 9 years ago

10.1038/s12276-020-00538-y

Tumor-promoting macrophages prevail in malignant ascites of advanced gastric cancer
Cited by: 39
Author(s): Hye Hyeon Eum, Minsuk Kwon, Daeun Ryu, Areum Jo, Wingyan Chung, Nayoung Kim, Yourae Hong, Dae‐Soon Son, Seung Tae Kim, Jeeyun Lee, Hae‐Ock Lee, Woong-Yang Park
Software Mentions: 4
Published: over 5 years ago

10.1111/eva.13142

Transcriptional frontloading contributes to cross‐tolerance between stressors
Cited by: 8
Author(s): Michael T. Collins, Melody S. Clark, John I. Spicer, Manuela Truebano
Software Mentions: 4
Published: over 5 years ago

10.1186/s13072-020-00368-2

Chromatin accessibility dynamics of Chlamydia-infected epithelial cells
Cited by: 4
Author(s): Regan J. Hayward, J. Wallis Marsh, Michael S. Humphrys, Wilhelmina M. Huston, Garry S. A. Myers
Software Mentions: 4
Published: over 5 years ago

10.1128/MCB.00668-17

The <i>Caenorhabditis elegans</i> Ortholog of TDP-43 Regulates the Chromatin Localization of the Heterochromatin Protein 1 Homolog HPL-2
Cited by: 12
Author(s): Tassa Saldi, Patrick Gonzales, Alfonso Garrido-Lecca, Vishantie Dostal, Christine M. Roberts, Leonard Petrucelli, Christopher D. Link
Software Mentions: 4
Published: almost 8 years ago

10.1186/s40793-019-0346-2

Reduced microbial potential for the degradation of phenolic compounds in the rhizosphere of apple plantlets grown in soils affected by replant disease
Cited by: 20
Author(s): Viviane Radl, Jana Barbro Winkler, Susanne Kublik, Luhua Yang, Traud Winkelmann, Gisle Vestergaard, Peter Schröder, Michael Schloter
Software Mentions: 4
Published: over 6 years ago

10.1002/ece3.1720

The transcriptomic and evolutionary signature of social interactions regulating honey bee caste development
Cited by: 34
Author(s): Svjetlana Vojvodic, Brian R. Johnson, Brock A. Harpur, Clement F. Kent, Amro Zayed, Kirk E. Anderson, Timothy A. Linksvayer
Software Mentions: 4
Published: almost 11 years ago

10.1002/ece3.6691

Leaf shape in <i>Populus tremula</i> is a complex, omnigenic trait
Cited by: 17
Author(s): Niklas Mähler, Bastian Schiffthaler, Kathryn M. Robinson, Barbara K Terebieniec, Matej Vučak, Chanaka Mannapperuma, Mark E.S. Bailey, Stefan Jansson, Torgeir R. Hvidsten, Nathaniel R. Street
Software Mentions: 4
Published: almost 6 years ago

10.15252/emmm.202013074

Impairment of the ER/mitochondria compartment in human cardiomyocytes with PLN p.Arg14del mutation
Cited by: 25
Author(s): Friederike Cuello, Anika E. Knaust, Umber Saleem, Malte Loos, Janice Raabe, Diogo Mosqueira, Sandra D. Laufer, Michaela Schweizer, Petra van der Kraak, Frederik Flenner, Bärbel Ulmer, Ingke Braren, Xiaoke Yin, Konstantinos Theofilatos, Jorge Ruiz-Orera, Giannino Patone, Birgit Klampe, Thomas G. Schulze, Angelika Piasecki, Yigal M. Pinto, Aryan Vink, Norbert Hübner, Siân E. Harding, Manuel Mayr, Chris Denning, Thomas Eschenhagen, Arne Hansen
Software Mentions: 4
Published: about 5 years ago

10.3389/fonc.2020.580750

Assessment of Prognostic Value of Cystic Features in Glioblastoma Relative to Sex and Treatment With Standard-of-Care
Cited by: 10
Author(s): Lee Curtin, Paula Whitmire, Cassandra R. Rickertsen, Gina L. Mazza, Peter Canoll, Sandra K. Johnston, Maciej M. Mrugala, Kristin R. Swanson, Leland Hu
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0206129

Testing the efforts model of simultaneous interpreting: An ERP study
Cited by: 10
Author(s): Roman Koshkin, Yury Shtyrov, Andriy Myachykov, Alexei Ossadtchi
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0167220

Effects of Neonatal Dexamethasone Exposure on Adult Neuropsychiatric Traits in Rats
Cited by: 4
Author(s): Nathanael J. Yates, Donald Robertson, Jennifer Rodger, Mathew T. Martin‐Iverson
Software Mentions: 4
Published: over 9 years ago

10.15252/emmm.201707882

Household triclosan and triclocarban effects on the infant and maternal microbiome
Cited by: 67
Author(s): Jessica V. Ribado, Catherine Ley, Thomas D. Haggerty, Е. И. Ткаченко, Ami S. Bhatt, Julie Parsonnet
Software Mentions: 4
Published: almost 9 years ago

10.1186/s13550-017-0318-8

Gut microbiota and physiologic bowel 18F-FDG uptake
Cited by: 16
Author(s): Ji Yeon Kang, Han Na Kim, Yoosoo Chang, Yeojun Yun, Seungho Ryu, Hocheol Shin, Hyung Lae Kim
Software Mentions: 4
Published: almost 9 years ago

10.15252/embj.2019103922

Prevention of dsRNA‐induced interferon signaling by AGO1x is linked to breast cancer cell proliferation
Cited by: 18
Author(s): Souvik Ghosh, Joao C. Guimaraes, Manuela Lanzafame, Alexander Schmidt, Afzal Pasha Syed, Beatrice Dimitriades, Anastasiya Börsch, Shreemoyee Ghosh, Nitish Mittal, Thomas Montavon, Ana Luísa Correia, Johannes Danner, Gunter Meister, Luigi Terracciano, Sébastien Pfeffer, Salvatore Piscuoglio, Mihaela Zavolan
Software Mentions: 4
Published: almost 6 years ago

10.1242/dev.175265

A gene expression atlas of embryonic neurogenesis in <i>Drosophila</i> reveals complex spatiotemporal regulation of lncRNAs
Cited by: 21
Author(s): Alexandra L. McCorkindale, Philipp Wahle, Irwin Jungreis, Peter Menzel, Chinmay Shukla, Rúben Lopes Pereira Abreu, Rafael A. Irizarry, Irmtraud M. Meyer, M Kellis, Robert P. Zinzen
Software Mentions: 4
Published: over 7 years ago

10.1038/s41380-018-0271-6

Alterations in sperm long RNA contribute to the epigenetic inheritance of the effects of postnatal trauma
Cited by: 106
Author(s): Katharina Gapp, Gretchen van Steenwyk, Pierre-Luc Germain, Wayo Matsushima, Konrad L. M. Rudolph, Francesca Manuella, Martin Roszkowski, Grégoire Vernaz, Tanay Ghosh, Paweł Pelczar, Isabelle M. Mansuy, Eric A. Miska
Software Mentions: 4
Published: over 7 years ago

10.1007/s00330-019-06167-y

Application of a deep learning algorithm for detection and visualization of hip fractures on plain pelvic radiographs
Cited by: 164
Author(s): Chi‐Tung Cheng, Tsung-Ying Ho, Tao-Yi Lee, Ching-Fang Chang, Ching-Cheng Chou, Chih-Chi Chen, I‐Fang Chung, Chien‐Hung Liao
Software Mentions: 4
Published: over 7 years ago

10.1093/database/baw168

KTCNlncDB—a first platform to investigate lncRNAs expressed in human keratoconus and non-keratoconus corneas
Cited by: 13
Author(s): Michał Wojciech Szcześniak, Michał Kabza, Justyna A. Karolak, Małgorzata Rydzanicz, Dorota Nowak, Barbara Ginter-Matuszewska, Piotr Polakowski, Rafał Płoski, Jacek P. Szaflik, Marzena Gajęcka
Software Mentions: 4
Published: over 9 years ago