Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.9688

https://doi.org/10.7717/peerj.9688

Evaluation of computational methods for human microbiome analysis using simulated data

Cited by: 14
Author(s): Matthieu J. Miossec, Sandro L. Valenzuela, Marcos Pérez‐Losada, William Johnson, Keith A. Crandall, Eduardo Castro-Nallar
Published: over 4 years ago

Software Mentions 2

cran: metaMix
Bayesian Mixture Analysis for Metagenomic Community Profiling
Papers that mentioned: 4
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306