Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.8272

https://doi.org/10.7717/peerj.8272

Evaluating probabilistic programming and fast variational Bayesian inference in phylogenetics

Cited by: 18
Author(s): Mathieu Fourment, Aaron E. Darling
Published: almost 5 years ago

Software Mentions 4

pypi: Edward
A library for probabilistic modeling, inference, and criticism
Papers that mentioned: 11
pypi: phylostan
Phylogenetic inference with Stan
Papers that mentioned: 1
pypi: pystan
Python interface to Stan, a package for Bayesian inference
Papers that mentioned: 5
pypi: TreeTime
TreeTime is a to-do list manager, test report tool, project manager, family ancestry editor,mind-mapping tool, etc. Using TreeTime you can categorise and organise any data in tree structures.You can define several trees, each with a different structure, on the same data. You can use functions(sums, ratios and means) recursively up the branches of a tree.
Papers that mentioned: 82