Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.3859

https://doi.org/10.7717/peerj.3859

How to normalize metatranscriptomic count data for differential expression analysis

Cited by: 31
Author(s): Heiner Klingenberg, Peter Meinicke
Published: almost 7 years ago

Software Mentions 4

bioconductor: compcodeR
RNAseq data simulation, differential expression analysis and performance comparison of differential expression methods
Papers that mentioned: 11
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776