Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.1360

https://doi.org/10.7717/peerj.1360

Getting the most out of RNA-seq data analysis

Cited by: 22
Author(s): Tsung Fei Khang, Ching Yee Lau
Published: about 9 years ago

Software Mentions 8

bioconductor: BitSeq
Papers that mentioned: 28
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: NOISeq
Exploratory analysis and differential expression for RNA-seq data
Papers that mentioned: 321
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: voom
A python message bus that you can put 4 million volts through.
Papers that mentioned: 136