Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.11880

https://doi.org/10.7717/peerj.11880

Cited by: 6
Author(s): Hui Zhao, Junjun Zhang, Xiaoliang Fu, Dongdong Mao, Xuesen Qi, Shuai Liang, Gang Ma, Zewen Song, Ru Yang, Zhenni Guo, Binghua Tong, Meiqing Sun, Baile Zuo, Guoyin Li
Published: almost 3 years ago

Software Mentions 14

bioconductor: clusterProfiler

A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223

bioconductor: GEOquery

Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

cran: dplyr

A Grammar of Data Manipulation
Papers that mentioned: 1,213

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: ggpubr

'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856

cran: ggstatsplot

'ggplot2' Based Plots with Statistical Details
Papers that mentioned: 82

cran: glmnet

Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607

cran: survival

Survival Analysis
Papers that mentioned: 1,690

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

cran: tidyverse

Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023

cran: timeROC

Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254

pypi: glmnet

Python wrapper for glmnet
Papers that mentioned: 1,607

pypi: survival

Add static script_dir() method to Path
Papers that mentioned: 1,690