Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.63632

https://doi.org/10.7554/eLife.63632

Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

Cited by: 119
Author(s): Elliott Swanson, Cara Lord, Julian Reading, Alexander T Heubeck, Palak C. Genge, Zachary Thomson, Morgan Weiss, Xiaojun Li, Adam K. Savage, Richard Green, Troy R. Torgerson, Thomas F. Bumol, Lucas T. Graybuck, Peter J. Skene
Published: over 3 years ago

Software Mentions 6

bioconductor: GenomicRanges
Representation and manipulation of genomic intervals
Papers that mentioned: 323
cran: cellranger
Translate Spreadsheet Cell Ranges to Rows and Columns
Papers that mentioned: 79
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: kent
Fake Sentry service for debugging and integration tests
Papers that mentioned: 3
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: scOpen

Papers that mentioned: 2