Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.57116

https://doi.org/10.7554/eLife.57116

shinyDepMap, a tool to identify targetable cancer genes and their functional connections from Cancer Dependency Map data

Cited by: 35
Author(s): Kenichi Shimada, John A. Bachman, Jeremy Muhlich, Timothy J. Mitchison
Published: over 3 years ago

Software Mentions 13

bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: DT
A Wrapper of the JavaScript Library 'DataTables'
Papers that mentioned: 74
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: plotly
Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
cran: shiny
Web Application Framework for R
Papers that mentioned: 127
cran: shinyWidgets
Custom Inputs Widgets for Shiny
Papers that mentioned: 12
cran: tibble
Simple Data Frames
Papers that mentioned: 47
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
cran: visNetwork
Network Visualization using 'vis.js' Library
Papers that mentioned: 49
pypi: plotly
An open-source, interactive data visualization library for Python
Papers that mentioned: 163
pypi: shiny
A web development framework for Python.
Papers that mentioned: 127