Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.7554/eLife.39982
https://doi.org/10.7554/eLife.39982
The Crohn’s disease polymorphism, ATG16L1 T300A, alters the gut microbiota and enhances the local Th1/Th17 response
Cited by: 76
Author(s): Sydney Lavoie, Kara L. Conway, Kara G. Lassen, Humberto Jijon, Pei Hui, Eunyoung Chun, Monia Michaud, Jessica Lang, Carey Ann Gallini Comeau, Jonathan M. Dreyfuss, Jonathan N. Glickman, Hera Vlamakis, Ashwin N. Ananthakrishnan, Aleksandar D. Kostic, Wendy S. Garrett, Ramnik J. Xavier
Published: almost 6 years ago
Software Mentions 2
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306