Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.38519

https://doi.org/10.7554/eLife.38519

Cited by: 106
Author(s): Diego Balboa, Jonna Saarimäki-Vire, Daniel Borshagovski, Mantas Survila, Päivi Lindholm, Emilia Galli, Solja Eurola, Jarkko Ustinov, Heli Grym, Hanna Huopio, Juha Partanen, Kirmo Wartiovaara, Timo Otonkoski
Published: over 5 years ago

Software Mentions 8

bioconductor: CAMERA
Collection of annotation related methods for mass spectrometry data
Papers that mentioned: 429
bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq data
Papers that mentioned: 34
cran: DDRTree
Learning Principal Graphs with DDRTree
Papers that mentioned: 42
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668
pypi: scmap
Assigns rgb colors to points on sphere.
Papers that mentioned: 34