Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.33084

https://doi.org/10.7554/eLife.33084

Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs

Cited by: 23
Author(s): Michelle C. Ward, Siming Zhao, Kaixuan Luo, Bryan J. Pavlovic, Mehdi Karimi, Matthew Stephens, Yoav Gilad
Published: over 6 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203