Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.18683

https://doi.org/10.7554/eLife.18683

Cited by: 185
Author(s): Felipe Mora‐Bermúdez, Farhath Badsha, Sabina Kanton, J. Gray Camp, Benjamin Vernot, Kathrin Köhler, Birger Voigt, Keisuke Okita, Tomislav Maričić, Zhisong He, Robert Lachmann, Svante Pääbo, Barbara Treutlein, Wieland B. Huttner
Published: over 7 years ago

Software Mentions 10

cran: FactoMineR
Multivariate Exploratory Data Analysis and Data Mining
Papers that mentioned: 1,101
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017