Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.02200

https://doi.org/10.7554/eLife.02200

Cited by: 206
Author(s): Mary A. Allen, Zdeněk Andrysík, Veronica L. Dengler, Hestia Mellert, Anna L. Guarnieri, John H. Freeman, Kelly D. Sullivan, Matthew D. Galbraith, Xin Luo, W. Lee Kraus, Robin D. Dowell, Joaquín M. Espinosa
Published: almost 10 years ago

Software Mentions 5

pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: igv
Jupyter extension for embedding the genome visualation igv.js in a notebook
Papers that mentioned: 16
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
pypi: Pathway
Pathway is a data processing framework which takes care of streaming data updates for you.
Papers that mentioned: 827
pypi: pybedtools
Wrapper around BEDTools for bioinformatics work
Papers that mentioned: 48