Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.00675

https://doi.org/10.7554/eLife.00675

Cited by: 344
Author(s): Katherine Noelani Chang, Shan Zhong, Matthew T. Weirauch, Gary C. Hon, Mattia Pelizzola, Hai Li, S. Huang, Robert J. Schmitz, Mark A. Urich, Dwight Kuo, Joseph R. Nery, Hong Qiao, Ally Yang, Abdullah Jamali, Huaming Chen, Trey Ideker, Bing Ren, Ziv Bar‐Joseph, Timothy R. Hughes, Joseph R. Ecker
Published: almost 11 years ago

Software Mentions 5

cran: spp
ChIP-Seq Processing Pipeline
Papers that mentioned: 16
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: Pathway
Pathway is a data processing framework which takes care of streaming data updates for you.
Papers that mentioned: 827
pypi: spp
My Simple Protocol Parser For Python, Built For Speed
Papers that mentioned: 16
pypi: STAMP
A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190