Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.4056/sigs.651139

https://doi.org/10.4056/sigs.651139

The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data

Cited by: 60
Author(s): David M. Tanenbaum, Johannes Goll, Sean D. Murphy, P. Naresh Kumar, Nikhat Zafar, Mathangi Thiagarajan, Ramana Madupu, Tanja M. Davidsen, Leonid Kagan, Saul Kravitz, Douglas B. Rusch, Shibu Yooseph
Published: over 14 years ago

Software Mentions 3

cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: HMM
Hidden Markov Models
Papers that mentioned: 577
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848