Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/v10050256

https://doi.org/10.3390/v10050256

Bioinformatics Meets Virology: The European Virus Bioinformatics Center’s Second Annual Meeting

Cited by: 6
Author(s): Bashar Ibrahim, Ksenia Arkhipova, Arno C. Andeweg, Susana Posada-Céspedes, François Enault, Arthur Gruber, Eugene V. Koonin, Anne Kupczok, Philippe Lemey, Alice C. McHardy, Dino P. McMahon, Brett E. Pickett, David L. Robertson, Richard H. Scheuermann, Alexandra Zhernakova, Mark P. Zwart, Alexander Schönhuth, Bas E. Dutilh, Manja Marz
Published: over 6 years ago

Software Mentions 1

pypi: MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306