Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/nu13061905

https://doi.org/10.3390/nu13061905

Microbiota and Metabolite Modifications after Dietary Exclusion of Dairy Products and Reduced Consumption of Fermented Food in Young and Older Men

Cited by: 4
Author(s): Jinyoung Kim, Kathryn J. Burton-Pimentel, Charlotte Fleuti, Carola Blaser, Valentin Scherz, René Badertscher, Corinne Marmonier, Noëlle Lyon-Belgy, A. Caillé, Véronique Pidou, Adeline Blot, Claire Bertelli, Jérémie David, Ueli Bütikofer, Gilbert Greub, Dominique Dardevet, Sergio Polakof, Guy Vergères
Published: over 3 years ago

Software Mentions 7

bioconductor: ALDEx2
Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account
Papers that mentioned: 136
bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: MicrobiotaProcess
A comprehensive R package for managing and analyzing microbiome and other ecological data within the tidy framework
Papers that mentioned: 3
cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
Papers that mentioned: 650
cran: FactoMineR
Multivariate Exploratory Data Analysis and Data Mining
Papers that mentioned: 1,101
cran: nparLD
Nonparametric Analysis of Longitudinal Data in Factorial Experiments
Papers that mentioned: 90
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562