Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/microorganisms9061313

https://doi.org/10.3390/microorganisms9061313

Influential Insider: Wolbachia, an Intracellular Symbiont, Manipulates Bacterial Diversity in Its Insect Host

Cited by: 5
Author(s): Morgane Ourry, Agathe Crosland, Valérie Lopez, Stéphane A. P. Derocles, Christophe Mougel, Anne‐Marie Cortesero, Denis Poinsot
Published: over 3 years ago

Software Mentions 9

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
bioconductor: microbiome
Microbiome Analytics
Papers that mentioned: 114
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: metacoder
Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data
Papers that mentioned: 32
cran: qgraph
Graph Plotting Methods, Psychometric Data Visualization and Graphical Model Estimation
Papers that mentioned: 222
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: microbiome
Papers that mentioned: 114