Papers: 10.3390/microorganisms8050677

https://doi.org/10.3390/microorganisms8050677

The Bacterial Gut Microbiota of Adult Patients Infected, Colonized or Noncolonized by Clostridioides difficile

Cited by: 21
Author(s): Monique J. T. Crobach, Quinten R Ducarmon, Elisabeth M. Terveer, Céline Harmanus, Ingrid M J G Sanders, Kees Verduin, Ed J. Kuijper, Romy D. Zwittink
Published: over 6 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
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bioconductor: microbiome
Microbiome Analytics
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bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
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cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
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cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
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cran: vegan
Community Ecology Package
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pypi: microbiome
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