Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/jof7030198

https://doi.org/10.3390/jof7030198

Innate Resistance and Phosphite Treatment Affect Both the Pathogen’s and Host’s Transcriptomes in the Tanoak-Phytophthora ramorum Pathosystem

Cited by: 9
Author(s): Takao Kasuga, Katherine J. Hayden, Catherine A. Eyre, Peter J.P. Croucher, Shannon Schechter, Jessica W. Wright, Matteo Garbelotto
Published: over 3 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: Rsubread
Mapping, quantification and variant analysis of sequencing data
Papers that mentioned: 331
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366