Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms22168451

https://doi.org/10.3390/ijms22168451

Rapid Transient Transcriptional Adaptation to Hypergravity in Jurkat T Cells Revealed by Comparative Analysis of Microarray and RNA-Seq Data

Cited by: 8
Author(s): Christian Vahlensieck, Cora S. Thiel, Jan Andreas Adelmann, Béatrice Lauber, Jennifer Polzer, Oliver Ullrich
Published: over 3 years ago

Software Mentions 5

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759