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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.3390/ijms22157974

https://doi.org/10.3390/ijms22157974

Transcriptomic and Metabolic Network Analysis of Metabolic Reprogramming and IGF-1 Modulation in SCA3 Transgenic Mice

Cited by: 4
Author(s): Yu Te Lin, Yong Shiou Lin, Wen Cheng, Jui-Chih Chang, Yi Chun Chao, Chin San Liu, An-Chi Wei
Published: about 4 years ago

Software Mentions 10

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
Very Likely Science (75)
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
Very Likely Science (100)
cran: EDA
Energy Decomposition Analysis
Papers that mentioned: 81
Very Likely Science (93)
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
Very Likely Science (90)
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
Very Likely Science (100)
pypi: pandas
Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640
Very Likely Science (100)
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366
Very Likely Science (80)
pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431
Very Likely Science (100)
pypi: seaborn
Statistical data visualization
Papers that mentioned: 283
Very Likely Science (100)