Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms22126319

https://doi.org/10.3390/ijms22126319

Expression Quantitative Trait Loci (eQTLs) Associated with Retrotransposons Demonstrate their Modulatory Effect on the Transcriptome

Cited by: 6
Author(s): Sulev Kõks, Abigail L Pfaff, Vivien J. Bubb, John P. Quinn
Published: over 3 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: plink
IRT Separate Calibration Linking Methods
Papers that mentioned: 399
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: plink
A full featured Tk-based knot and link editor
Papers that mentioned: 399