Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms22094917

https://doi.org/10.3390/ijms22094917

The Cellular Composition of Bovine Coccygeal Intervertebral Discs: A Comprehensive Single-Cell RNAseq Analysis

Cited by: 24
Author(s): Martina Caliò, Benjamin Gantenbein, Marcel Egli, Lucy Poveda, Fabian Ille
Published: over 3 years ago

Software Mentions 7

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: scran

Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113

cran: SEA

Segregation Analysis
Papers that mentioned: 238

cran: Seurat

Tools for Single Cell Genomics
Papers that mentioned: 1,512

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893