Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/ijms22094598

https://doi.org/10.3390/ijms22094598

Combined Transcriptomic and Proteomic Analysis of Perk Toxicity Pathways

Cited by: 6
Author(s): Rebeka Popovic, Ivana Celardo, Yao Yu, Ana Carolina Oliveira Costa, Samantha H. Y. Loh, L. Miguel Martins
Published: over 3 years ago

Software Mentions 6

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: MSnbase
Base Functions and Classes for Mass Spectrometry and Proteomics
Papers that mentioned: 24
cran: MCL
Markov Cluster Algorithm
Papers that mentioned: 563
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: DEA
A simple library for differential expression analysis
Papers that mentioned: 195