Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/genes11030257

https://doi.org/10.3390/genes11030257

mRNAsi Index: Machine Learning in Mining Lung Adenocarcinoma Stem Cell Biomarkers

Cited by: 61
Author(s): Yitong Zhang, Joseph T. Tseng, I-Chia Lien, Fenglan Li, Wei Wu, Hui Li
Published: over 4 years ago

Software Mentions 20

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: enrichplot
Visualization of Functional Enrichment Result
Papers that mentioned: 249
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: doParallel
Foreach Parallel Adaptor for the 'parallel' Package
Papers that mentioned: 90
cran: dynamicTreeCut
Methods for Detection of Clusters in Hierarchical Clustering Dendrograms
Papers that mentioned: 49
cran: fastcluster
Fast Hierarchical Clustering Routines for R and 'Python'
Papers that mentioned: 36
cran: foreach
Provides Foreach Looping Construct
Papers that mentioned: 50
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: Hmisc
Harrell Miscellaneous
Papers that mentioned: 1,000
cran: matrixStats
Functions that Apply to Rows and Columns of Matrices (and to Vectors)
Papers that mentioned: 46
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: dynamicTreeCut
Dynamic Tree Cut
Papers that mentioned: 49
pypi: fastcluster
Fast hierarchical clustering routines for R and Python.
Papers that mentioned: 36
pypi: plotter
Plotting library with descriptive approach
Papers that mentioned: 269
pypi: profiling
An interactive continuous Python profiler.
Papers that mentioned: 7
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690