Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/genes10030231

https://doi.org/10.3390/genes10030231

H3K27me3 Depletion during Differentiation Promotes Myogenic Transcription in Porcine Satellite Cells

Cited by: 12
Author(s): Sheng Wang, Yan Sun, Ruimin Ren, Junhui Xie, Xiaohuan Tian, Shuhong Zhao, Xinyun Li, Jianhua Cao
Published: almost 6 years ago

Software Mentions 6

bioconductor: ChIPseeker
ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
Papers that mentioned: 161
bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: GOplot
Visualization of Functional Analysis Data
Papers that mentioned: 269
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071