Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cells10071576

https://doi.org/10.3390/cells10071576

Transcriptomic Profiling of Femoral Veins in Deep Vein Thrombosis in a Porcine Model

Cited by: 7
Author(s): Leszek Gromadziński, Łukasz Paukszto, Agnieszka Skowrońska, Piotr Holak, Michał Smoliński, Elżbieta Łopieńska–Biernat, Ewa Lepiarczyk, Aleksandra Lipka, J Jastrzebski, Marta Majewska
Published: over 3 years ago

Software Mentions 7

bioconductor: ballgown
Flexible, isoform-level differential expression analysis
Papers that mentioned: 21
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: pathview
a tool set for pathway based data integration and visualization
Papers that mentioned: 144
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: GOplot
Visualization of Functional Analysis Data
Papers that mentioned: 269
cran: gProfileR
Interface to the 'g:Profiler' Toolkit
Papers that mentioned: 56
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759