Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers11081104

https://doi.org/10.3390/cancers11081104

Differential Expression of DNA Repair Genes in Prognostically-Favorable versus Unfavorable Uveal Melanoma

Cited by: 10
Author(s): Mehmet Doğrusöz, Andrea Ruschel Träsel, Jinfeng Cao, Selҫuk Ҫolak, Sake I. van Pelt, Wilma G. M. Kroes, Amina F.A.S. Teunisse, Samar Alsafadi, Sjoerd G. van Duinen, Gregorius P M Luyten, Pieter A. van der Velden, Adriana Amaro, Ulrich Pfeffer, Aart G. Jochemsen, Martine J. Jager
Published: over 5 years ago

Software Mentions 11

bioconductor: annotate
Annotation for microarrays
Papers that mentioned: 36
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: lumi
BeadArray Specific Methods for Illumina Methylation and Expression Microarrays
Papers that mentioned: 238
cran: plus
Penalized Linear Unbiased Selection
Papers that mentioned: 48
cran: R.utils
Various Programming Utilities
Papers that mentioned: 13
pypi: annotate
Decorator to set a function's __annotations__ like Py3.
Papers that mentioned: 36
pypi: heatmap
Module to create heatmaps
Papers that mentioned: 285
pypi: plus
A tool for helping you config, visualize, log and debug deep learning.
Papers that mentioned: 48
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017
pypi: utils
A grab-bag of utility functions and objects
Papers that mentioned: 35