Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fpls.2018.01770

https://doi.org/10.3389/fpls.2018.01770

Statistical and Machine Learning Approaches to Predict Gene Regulatory Networks From Transcriptome Datasets

Cited by: 45
Author(s): Keiichi Mochida, Satoru Koda, Komaki Inoue, Ryuei Nishii
Published: almost 6 years ago

Software Mentions 3

bioconductor: AUCell
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
Papers that mentioned: 45
bioconductor: GENIE3
GEne Network Inference with Ensemble of trees
Papers that mentioned: 172
bioconductor: RcisTarget
RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions
Papers that mentioned: 55