Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fonc.2021.711020

https://doi.org/10.3389/fonc.2021.711020

Integration of scRNA-Seq and Bulk RNA-Seq to Analyse the Heterogeneity of Ovarian Cancer Immune Cells and Establish a Molecular Risk Model

Cited by: 37
Author(s): Leilei Liang, Jing Yu, Jian Li, Ning Li, Jing Liu, Lin Xiu, Jia Zeng, Tiantian Wang, Lingying Wu
Published: about 3 years ago

Software Mentions 9

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: NMF
Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893