Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fonc.2021.644416

https://doi.org/10.3389/fonc.2021.644416

Cited by: 62
Author(s): Zhuo Lin, Xu Qian, Dan Miao, Fang Yu
Published: about 3 years ago

Software Mentions 16

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: corrplot
Visualization of a Correlation Matrix
Papers that mentioned: 1,077
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
cran: timeROC
Time-Dependent ROC Curve and AUC for Censored Survival Data
Papers that mentioned: 254
cran: venn
Draw Venn Diagrams
Papers that mentioned: 44
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690
pypi: venn
Venn diagrams for 2, 3, 4, 5, 6 sets
Papers that mentioned: 44