Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fonc.2021.640150

https://doi.org/10.3389/fonc.2021.640150

Cited by: 19
Author(s): Yang Su, Tianxiang Zhang, Jiapeng Tang, Li Zhang, Song Fan, Jun Zhou, Chaozhao Liang
Published: about 3 years ago

Software Mentions 11

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: enrichplot
Visualization of Functional Enrichment Result
Papers that mentioned: 249
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: GOplot
Visualization of Functional Analysis Data
Papers that mentioned: 269
cran: survivalROC
Time-Dependent ROC Curve Estimation from Censored Survival Data
Papers that mentioned: 479
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607