Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fnmol.2017.00340

https://doi.org/10.3389/fnmol.2017.00340

Cell Type-Specific mRNA Dysregulation in Hippocampal CA1 Pyramidal Neurons of the Fragile X Syndrome Mouse Model

Cited by: 32
Author(s): Laura Ceolin, Nathalie Bouquier, Jihane Vitre-Boubaker, Stéphanie Rialle, Dany Séverac, Emmanuel Valjent, Julie Perroy, Emma Puighermanal
Published: about 7 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: topGO
Enrichment Analysis for Gene Ontology
Papers that mentioned: 652
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017