Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmolb.2021.684050

https://doi.org/10.3389/fmolb.2021.684050

Cited by: 10
Author(s): Weimin Zhong, Hongbin Zhong, Fengling Zhang, Chaoqun Huang, Yao Lin, Jian Huang
Published: almost 3 years ago

Software Mentions 11

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: NMF
Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
cran: survivalROC
Time-Dependent ROC Curve Estimation from Censored Survival Data
Papers that mentioned: 479
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893