Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmolb.2019.00002

https://doi.org/10.3389/fmolb.2019.00002

Multi-Omics and Genome-Scale Modeling Reveal a Metabolic Shift During C. elegans Aging

Cited by: 40
Author(s): Janna Hastings, Abraham Mains, Bhupinder Virk, Nicolás Rodríguez, Sharlene Murdoch, Juliette Pearce, Sven Bergmann, Nicolas Le Novère, Olivia Casanueva
Published: over 5 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: Metab
Metab: An R Package for a High-Throughput Analysis of Metabolomics Data Generated by GC-MS.
Papers that mentioned: 8
pypi: Escher
Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Metabolic Pathways
Papers that mentioned: 43