Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2021.720991

https://doi.org/10.3389/fmicb.2021.720991

The Role of Hydrophobic Nodes in the Dynamics of Class A β-Lactamases

Cited by: 5
Author(s): Edgar Olehnovics, Junqi Yin, Adrià Pérez, Gianni De Fabritiis, Robert A. Bonomo, Debsindhu Bhowmik, Shozeb Haider
Published: about 3 years ago

Software Mentions 5

pypi: ACEMD

Papers that mentioned: 84
pypi: mdtraj
MDTraj: A modern, open library for the analysis of molecular dynamics trajectories
Papers that mentioned: 8
pypi: propka
Heuristic pKa calculations with ligands
Papers that mentioned: 15
pypi: pytraj
Python API for cpptraj: a data analysis package for biomolecular simulation
Papers that mentioned: 19
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071